Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_004456.1 Length=43198 Score E Sequences producing significant alignments: (Bits) Value seq835057 98.7 3e-16 >seq835057 Length=261 Score = 98.7 bits (108), Expect = 3e-16 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 31321 CGACATGATCGCGGACAGCCTGGTTCGCAACCACCTGTGGGCGGTTGACCGCAACATCAC 31380 |||||| || || |||||||| | | ||| |||||||| || |||||| ||||| Sbjct 17 CGACATCATTGCTGACAGCCTCGAGGCCGCCCATCTGTGGGCCGTCGACCGCGGCATCAG 76 Query 31381 CAAGACCTACGTCGAAGACGTGACGGAAGGGGTGAATAACTACCTGCGCCACCTCAAAAA 31440 ||||||||||||||| |||||| || || || || || ||||||| ||| || | Sbjct 77 CAAGACCTACGTCGACGACGTGCGCGAGGGCGTCAACGCCTTCCTGCGCGGCCTGAAGAC 136 Query 31441 CATCGGTGCGATTGCCGGTGGTGAGTGCTGGGTGGACCCGGAGCTGAAC 31489 | || ||||| ||| || | |||||| | |||||||| |||||| Sbjct 137 CCAGGGCGCGATCCTCGGCGGCAACTGCTGGATCGACCCGGAACTGAAC 185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134704076127920