Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_004688.1 Length=110865 Score E Sequences producing significant alignments: (Bits) Value seq833769 123 2e-23 >seq833769 Length=269 Score = 123 bits (136), Expect = 2e-23 Identities = 131/173 (76%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 80392 CGTCGAGATGTGGGAGCAATGCCTGCGGGTCCTCAAGCCCGGTGGGCACCTGCTCGCCTT 80451 || ||| || |||| ||| |||||||| || || ||||| || || || || || ||||| Sbjct 223 CGCCGATATCTGGGCGCAGTGCCTGCGCGTACTGAAGCCTGGCGGCCATCTACTGGCCTT 164 Query 80452 CGGCGGCTCCCGCACCTGGCACCGGCTGACCGTGGCCATCGAGGACGCCGGGTTTGAGAT 80511 || ||| | |||||| ||| || || |||| ||||||||| || || || ||||| Sbjct 163 CGCAGGCACGCGCACCCAGCATCGCATGGCCGTTCGCATCGAGGATGCGGGTTTCGAGAT 104 Query 80512 CCGCGACTCGATCGCCTGGCTGTACGGCAGCGGGTTCCCGAAGTCGCTCGACG 80564 ||||||| |||||||||| | |||||| || ||||||||||| | | ||| Sbjct 103 CCGCGACATGATCGCCTGGGTCTACGGCTCGGGCTTCCCGAAGTCACACAACG 51 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345662067207186