Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_005357.1 Length=42493 Score E Sequences producing significant alignments: (Bits) Value seq18201 850 0.0 seq900453 197 4e-46 >seq18201 Length=11482 Score = 850 bits (942), Expect = 0.0 Identities = 1333/1901 (70%), Gaps = 33/1901 (2%) Strand=Plus/Minus Query 15353 GGCGGTGAGCCGTAGGGTTCGGACGTGCGCTGCTTCACCTCGGTGAGCGCGTCCGCGTGC 15412 ||||||| ||||| || || | ||||| ||||| | || | ||| ||| | Sbjct 10860 GGCGGTG--CCGTACGGCTCCGTGGTGCGTTGCTTGAACTGGACCAGCTTGTCGGTCGAT 10803 Query 15413 GGGCCGGCGAAGATGCCG---GACGACCGATGCACGCGCAACCACAGCTTGTTGATGTTC 15469 || ||||||||||||||| || ||| || ||||| ||| | |||||||| |||| Sbjct 10802 GGACCGGCGAAGATGCCGCTGGATGACAC---CATGCGCATCCAGATCTTGTTGACGTTC 10746 Query 15470 TTGACGCGCCCTTGGCCGAAGCTGCCGTCCAGTTGCATCGCCACCGGCAGGGT-TTGCAG 15528 || ||| || |||||| ||| | ||| | || |||| || || || ||| | Sbjct 10745 TTCGTGCGACCCTGGCCGTAGCCGGTGTCGATCTGGGCTGCCAGAGGGAGCGTCTTGGCG 10686 Query 15529 TTCTGCGGTGATGGGCAGGCCGATATGCACGGTGCCGGCCTCCACGTCCAGGTCAATGGC 15588 | | || |||| |||||||||| ||||| || ||| | |||||| || || || Sbjct 10685 T-CGGCAGTGACCGGCAGGCCGACTTGCACCACGCTGGCGGCGTTGTCCAGTTCGATCGC 10627 Query 15589 GCCGTCAGTGACGACGCGCTGCGGATGCACCGCGCCATCGGCCAGGATGCTGACGGTTTT 15648 |||| | || || || || || || ||||||||||| ||||||||||||||||||||||| Sbjct 10626 GCCGGCCGTTACCACCCGTTGTGGGTGCACCGCGCCGTCGGCCAGGATGCTGACGGTTTT 10567 Query 15649 CCCTTCGAGGTGCTCCAGGCCGCTGATA-TGG-CTTACCGGCTCGCCCGAGTACGTCAGG 15706 ||||| || ||||| |||||| ||| | | |||| ||| || ||| | Sbjct 10566 TCCTTCCAGCCAGTCCAGATTGCTGATCGTGGTCGTTGCGGC--GCCGATATATGTCGCG 10509 Query 15707 CCGCTATCGACGAAGAAGGCGTCCGCCTGGGCATCGAACTGGCGCGAGGCCATGCGCTCG 15766 ||||| ||||||||||| ||||| ||| | |||||| || ||||| ||||||| Sbjct 10508 CCGCTGTCGACGAAGAAAGCGTCTGCCAAGCTCCCGAACTTCCGGCTGGCCAAGCGCTCG 10449 Query 15767 ACATACCGCACCTCGTTGCCGCCAATGGTGCGACGCACGACGGCATAGAGCCGGTCCTCG 15826 ||||| ||| || |||||| || ||| |||||||| |||| | | ||||| Sbjct 10448 ACATAGCGCCGCTGCACGCCGCCGATCTCGCGCCGCACGACCACATACAACACATCCTCA 10389 Query 15827 TTACCCTCGGCCACCACCGCGCAGGACTCGAACACGCCGTCCGTGTCGTGCTGGTGCCAC 15886 ||||| || || || |||||||| ||||| |||||||| ||||||||||| ||||| Sbjct 10388 CGGCCCTCAGCGACGACTGCGCAGGATTCGAATACGCCGTCGGTGTCGTGCTGATGCCAA 10329 Query 15887 GCGCCGATCTGTTGCTCGGGCACGTAGGTGAGGCCCAGCAGCTTGCCGCTGCTGCTGATG 15946 ||||||| ||| |||||||| |||||||||||||| |||| |||||| |||||||| | Sbjct 10328 GCGCCGACCTGCTGCTCGGGAACGTAGGTGAGGCCGAGCAACTTGCCCGAGCTGCTGACG 10269 Query 15947 AACCACACGATAGGCTGCGGCGCCTTCGCGTAGGCCATGTCCAGAATNNNNNNNNNNNNG 16006 ||| ||||| || |||||||||||||| || ||||| | | | Sbjct 10268 GCCCAGACGATGGGTATAGGCGCCTTCGCGTACGCTATGTCGACCAGCTCGTAGTCGTCG 10209 Query 16007 AACAGGTGCGCCGCGCGCAGGGACAGGTCGCCGGTGACGAAACCGTTGGCCTGCCAGTTG 16066 || || || | |||||| || ||||| |||| | | | ||||| || | || | Sbjct 10208 AAGAGATGGATGGAGCGCAGCGAAAGGTCACCGGACATGTAGCCGTTCGCGTCCCGGGAA 10149 Query 16067 TAGGCCAGTTCGCGCACGTGGCCGCCGCGCGCGGCGCCGT--AGATGGTCGTGTTGTTGA 16124 ||||||| || |||| |||||||||||| || ||||||| || ||| || |||||| Sbjct 10148 TAGGCCATCTCTCGCATGTGGCCGCCGCGGGCCGCGCCGTACAGCAGGT--TGCTGTTGA 10091 Query 16125 CCACGACCGGCTGCACGTCGGTGGCCCCGACGTAGGACTGCGGCCGCACGCTGATGGTGG 16184 | ||| |||||||||| | |||| |||| ||| ||||| ||| ||| |||| ||| Sbjct 10090 TGATGACTGGCTGCACGTTGTTGGCGCCGATGTACGACTGGGGCTTCACCGAGATGCTGG 10031 Query 16185 TGGGCGTTACCGCGTCGGAGTTCACCGACGCCACGCGCCATTCGCCCGAAGACGTGAGCA 16244 || || | ||||||| ||||||||| | | || ||||| | || || |||| Sbjct 10030 AAGGAGTCAGGGCGTCGGTGTTCACCGAGGTGATCCGGAATTCGGCAGAGCTGGTCAGCA 9971 Query 16245 GCAGCAACTCGGTGAGCGGCACGATATGGCGGATGGCGTTGGCCTCGCGCGCGGCCACCC 16304 ||||| || | || || || | ||||||||| | |||||||| |||| || | | Sbjct 9970 CCAGCAGGTCCGACAGAGGAACCACATGGCGGATAGTGTTGGCCTGCAGCGCAGCGATGC 9911 Query 16305 GGAAGGCTACCCGGTCGTCGTCGCGCACGGGAAGCGAGTACGACATGGCCGATTCGGTGC 16364 ||||||| | |||||| ||||| || ||||| || |||||| | | || |||| Sbjct 9910 GGAAGGCGATCCGGTCATCGTCCTTGGTCGGCAGCGAATAAGACATGTCGGCCTCCGTGC 9851 Query 16365 CACTGCGCGTCATCCAAATGTTCTGCGGCTTGTTGGTAGTGCCGGCAAAGCATCGGCGTT 16424 | | |||||||| || ||||||||| |||| | || || | ||| ||||| | Sbjct 9850 CCGACCTGGTCATCCAGATCTTCTGCGGCGCGTTGCTGGTCCCACCGAAGACGCGGCGCT 9791 Query 16425 GCTCGAAGTA---GGACACGGCCGCGGGGTAATCGCCGGCGGCGTTGAACACGGCGTCGT 16481 ||||| | || || | ||||| ||||| ||||||||||| | |||||| ||| | Sbjct 9790 GCTCGTAATAGCTGGTCGCGGCC---GGGTAGTCGCCGGCGGCCTGGAACACCTGGTCAT 9734 Query 16482 AGATCGGGGGCGTGACGGACAGGTCGGGCGCGATATTGTCGTCCACCAGCGAGGTGCCGG 16541 || |||| ||||| | || ||||||| ||||| |||||||||||||| ||| || Sbjct 9733 AGTTCGGAGGCGTCAGCGATAGGTCGGCTGCGATGTTGTCGTCCACCAGGCTGGTATTGG 9674 Query 16542 TGGTCTGGCCGATATAGCCGTACAGGCCGCCTTGCTCCTTATAGACGTTGTAGC------ 16595 |||| ||||||| ||||||||| ||| || || ||| |||||| || | Sbjct 9673 TGGTGCGGCCGATGTAGCCGTACGTGCCACCCTGGAGCTTGTAGACGGCATACCACGTGC 9614 Query 16596 ---GCGACGCGCCGGACGAGGCCGACCACGCGATGGTGTTGGCGCCGCCGTTGGTGAAGA 16652 || |||||| || || | ||| | ||| ||||| ||||| || || | Sbjct 9613 CCGCCGGCGCGCCTACCGGCGCAGTCCAGGAGATCGTGTTCTTCGCGCCGGAGGCAAAAA 9554 Query 16653 GGTTGTTGGTGCAGGTGCCGGCCGACGAGGGAGCGGACTCGGTTTTACCCTCGGCATCCA 16712 |||||| ||||||| |||| | || | |||| ||| || || | Sbjct 9553 TGTTGTTCTGGCAGGTGGCGGCGGCGCTGGCCACCGACTGGGTGAGCAGGTCTGCTGAGA 9494 Query 16713 GGGCCGTGACCACGTAGCGGTAGGTGTAGTCGGTGCCCTTGTTGTTCGACGTGGCGGTCA 16772 | |||||||| ||| ||| ||| | |||||| | | |||| | ||| || Sbjct 9493 ACGTGGTGACCACATAGGAGTAATCGTACTGGGTGCCGGCGCCGCTCGATGCCGCGCCCA 9434 Query 16773 CGCTCGTGGGCGTAGCCACCGGCGACGTGAAGGCGATGGTCGCCAGTTGCCAGTTGGTCG 16832 || ||||||| |||| | | ||||||||||||| | | || |||||| || | Sbjct 9433 CGGCGGTGGGCGGCTGCACCTGGGGAGTGAAGGCGATGGGCACGAGCGTCCAGTTCGTGG 9374 Query 16833 CGCCCAGGCGGCGCAGTTCACGCGGCGCATAGTTCGGATGCACGAGCGTGAGCACGTCAG 16892 |||| || ||||| || | |||||||| || || || ||||| ||||| || ||||| Sbjct 9373 CGCCTAGCCGGCGAAGCGCGCGCGGCGCGTATTTGGGGTGCACCAGCGTCAGGACGTCGC 9314 Query 16893 CCGACTGGACATAGTGGATGTTGAACAGGTCGGCTTCGGCGTAGGGATTGGCGATTTCGT 16952 | |||||| | ||||||| ||| |||||||| ||||| || ||||| ||||| |||| Sbjct 9313 CGGACTGGGTGAAATGGATGTCGAAAAGGTCGGCCTCGGCATACGGATTTGCGATCTCGT 9254 Query 16953 AGGGCACGGCGCCGTCCAGCAGCGTGCCGCCGTTGGTATGGAAGCGAAAATAACCCGCAC 17012 | ||| | || |||| ||| | |||| |||| | ||| |||||||| || || || || | Sbjct 9253 ACGGCGCCGCTCCGTTCAGGACCGTGGCGCCTTGGGTGTGGAAGCGGAAGTAGCCGGCGC 9194 Query 17013 CCAACTCGATCACCATTGTTTGCGTGACCGAGTAGGTGAACGGGATGAGCCGCACCTTCT 17072 ||| ||| | ||||| || || || |||| ||||||| || | || || ||| || Sbjct 9193 CCAGCTCAAGGACCATCGTCTGGGTAGTCGAGAAGGTGAAGGGCAGCAGGCGTACCGCCT 9134 Query 17073 TGGCCGAATCCTTCACCTCGCGCACGAAGGCGAAGCCGGCGCGGTTCTCGGCCGGGCCTT 17132 || ||||||||||||||| ||||||| ||||||||||| ||||||||| |||||| | Sbjct 9133 TGCTGGAATCCTTCACCTCGTGCACGAACGCGAAGCCGGCCCGGTTCTCGATCGGGCCCT 9074 Query 17133 GGGGCTTGACCACGAAGTTGCGGCAGATGGCGAGGCCGCTTTGGTACTTCACGTCGTCGA 17192 |||| || ||||||||||||||||| | || | |||| | ||| |||| ||||| ||| Sbjct 9073 GGGGTTTCACCACGAAGTTGCGGCACAGCGCCAAGCCGGTCTGGAACTTGGCGTCGCCGA 9014 Query 17193 TGCGCCCGAACATTTCCGGGCTGATTTCGCCGCCGCCGAAG 17233 | | ||||| | || || ||| ||||||||| |||| Sbjct 9013 TCTGGCCGAAGAACTCGGGTGTGAGCTCGCCGCCGTTGAAG 8973 Score = 587 bits (650), Expect = 2e-163 Identities = 1137/1651 (69%), Gaps = 49/1651 (3%) Strand=Plus/Minus Query 21229 GCGCGTTGCTTGCGGATAAGCGCCACCTGATTGCCCGGCACGATCAA-CTCGGGGTCGAT 21287 ||||| |||| ||||| || ||| ||||| | | | | ||||| ||||| | | | Sbjct 4339 GCGCGCTGCTGGCGGACAATCGCGACCTGGTCGGATGCCGTGATCAGGCTCGGCGGC-AC 4281 Query 21288 GCCCAGCATGTCGGCGTAAGTGTCGGCCCAGCGGTCGGCGTCGAACTTGTCGAGCACTTC 21347 ||||||||||||| ||| | | | ||| ||| |||| ||| ||||| ||||| || Sbjct 4280 GCCCAGCATGTCGCTGTAGATCTTCGTCCACTCGTCCGCGTTGAAGTTGTCCAGCACGTC 4221 Query 21348 GGGCTTGATGCCGGCCACCGCGCCCAGGTTGCCAACGAAACGATCAACCGAGTTCGTCGC 21407 ||||| || ||| | || |||||||||||| ||||| || || ||| ||| || || Sbjct 4220 AGGCTTCATCTGGGCGATCGTGCCCAGGTTGCCGACGAAGCGGTCGACCCCGTTGGTAGC 4161 Query 21408 AATGGCGCGCTGGGCCTGCGCGAGCATGGAAACGAACTCCACGTTCAGGTCAACGCCCTG 21467 | ||||||||||| ||||| |||| || | |||| |||| ||| | ||| || Sbjct 4160 GACAGCGCGCTGGGCTTGCGCCAGCACCGAGGTGTACTCGACGTCCAGCTGCTGGCCGTG 4101 Query 21468 CATTTCCTGCGGCGGGGGCGGCAGGATGTTGGCCTCGACCATGC--GCTGAAA-CGTCAA 21524 || || |||| || || |||||| ||| || | | || || | ||| ||| Sbjct 4100 CAGCTCGGGCGGTGGCGGGGGCAGGGCGTTCGCTGCAAGCA-GCATGTCGAAGGCGTTG- 4043 Query 21525 TTCGATGAGCGGGTCGAGGATTTCGTTGTGCATCCGTTCAAGCACCGGCCCCAGCATGAG 21584 |||| |||||| || ||||||| || || || |||||||| |||||||| || Sbjct 4042 -TCGACCAGCGGGCTCAGCGCCTCGTTGTCCAGGCGCTCGAGCACCGGGCCCAGCATCAG 3984 Query 21585 CAGCTTTTCCTCGTGCCGCTCGGCCACTTCGGTGGCGGTCATCTGCGGATTGGT-GCCGT 21643 |||||| || ||||| ||||||||||| |||||||||||||| |||| | || | || Sbjct 3983 CAGCTTCTCTTCGTGGCGCTCGGCCACCTCGGTGGCGGTCATGC-CGGACTTGTCGAGGT 3925 Query 21644 TGGCGAGCATGAGGAACAGGTCGGCGTAGAAACTCGCCTTGATGCGCTCGCGCACGTCCA 21703 | | ||||| ||||| ||||| |||||| | | | |||||||| ||| |||||| Sbjct 3924 TCGACAGCATCAGGAAGAGGTCCTTGTAGAAGGCCTCATCGATGCGCTGGCGGACGTCCT 3865 Query 21704 CGATGTCAGCCAGAAGGTGCGACAGGTCGAGGTTGACCTCGAACGCGGTACGGATGCCAC 21763 |||| | | ||||||||||||||||| || |||| | ||| | |||| | | Sbjct 3864 GCATGTTCACGCGCAGGTGCGACAGGTCGAGATTCACCTGCCAGGCGCTCTGGATAGCGC 3805 Query 21764 CGTTG--GGCGCG----GCCGCGTCCACATAGGACAGGCCGCCCGGCACGGTGCTGATGT 21817 | ||| | ||| || | ||| ||| | || ||||||| |||| || Sbjct 3804 CCTTGCCGCCGCCAGTCGCTGGGTCGTAGTAGCTGACCCCACCCGGCAGGGTGTCCATCG 3745 Query 21818 CCTGGTTCTTGGCGGACACCGGCAGTTGCAGCGGCGGGTTGCTCTTGTAGTCGATGGCCT 21877 ||||||||| || | |||| |||||||| || || ||| |||||||||| ||| Sbjct 3744 GCTGGTTCTTCATGGTGATGGGCACCTGCAGCGGTGGCTTCGTCTGGTAGTCGATGCCCT 3685 Query 21878 GCGCCTTGCGCAGTTGCTCATGTTGTAGCTGGCGCACGTCGCCCAAGGCTTCCATTGCGG 21937 | || |||||| | || || || | ||| | |||||| | || ||||| | | Sbjct 3684 GGCCCAGGCGCAGGTTCTGGTGCTGCAACTGCTTAATGTCGCCGAGCGCCTCCATGCCCG 3625 Query 21938 GGCTGTTGCCGTAGATGTCACCGCCGACCAAGGCCCAACGCGGGCACAGTGCGCGGAA-C 21996 ||||||||||||| ||||| |||| | ||| |||| ||||| || | || |||| | Sbjct 3624 GGCTGTTGCCGTAAATGTCGCCGCTGGCCAGATCCCACCGCGGACAGATGCCGGGGAATC 3565 Query 21997 GACCGATAGCCGGATTCGCGCAGCGTGCGGGTTTCGTCGGCGCCTGGCTCGAAATAGACC 22056 | || |||| ||||||||||| ||| |||| |||| ||||||| ||| Sbjct 3564 GCTTGA-AGCCCGATTCGCGCAGATACCGGTCATCGTTCACGCCCTGCTCGAAGTAGGTG 3506 Query 22057 GACTTCCACGCCATGTTGCGGTCG-TCGCGCTTGCTCGGGTCGCGGTCGGCGCGCGGCTC 22115 |||| ||||||||| | | | || |||| ||||||||||||||||||||||||| Sbjct 3505 CTGCTCCATGCCATGTTG-GCTGGATCCAGCTTCGTCGGGTCGCGGTCGGCGCGCGGCTC 3447 Query 22116 GATGGCGTGAATGACCGTAACCCA-CTGTTCCAGCGCGCCGCGGTCGAACAGGCTTTGCA 22174 || |||||| | || | ||||| ||| ||||| ||| |||||| |||| | | || Sbjct 3446 GACGGCGTGGACCACAGGCACCCAGCTG-TCCAGGCTGCCACGGTCGTACAGCGTCTTCA 3388 Query 22175 CGGTGGTGCTGCACTTGTCCTTGCCGAATTCGCGCACCA-TCTGCGCGACCGTGATCTGG 22233 | || | |||| || | | | |||||||| ||| | || | | || || ||| | Sbjct 3387 CCGTAGCGCTGATCTGCTTCATCCCGAATTCCTTCACGAGGCTAC-CCACGGTAGTCTCG 3329 Query 22234 AATTCTCGATACAGCGTATTGACGCGGCCCTGGTTGTCGGCCGCGATGGCGTATTCGCCG 22293 || || || || | ||| || ||| | ||||| ||||||| ||||||||| Sbjct 3328 AACTCGCGGTAGATCGTGCATACCTCGCCGCGCCAGTCGGTCGCGATGCAGTATTCGCCA 3269 Query 22294 GCCGTCAGCGAATGGTGATAGACCACGGCGTCGAAGTCGGGCAGCACGATGCTGCTGGCC 22353 | |||||||| ||||| | | |||| | |||||| || | | | |||| | | Sbjct 3268 GTCGTCAGCGGGTGGTGGTGCAGCACGTTGCGGAAGTCAGGGACGATCAGGCTGGCGCCA 3209 Query 22354 GTGCCGAACGCGCCGAGTTCTTCGTACATGGAGTGCAGCGCGCGATAGGTGTTCGATTTG 22413 || ||||| |||| | ||| | ||| | ||||||||||||||| ||||||||||| || Sbjct 3208 GTACCGAAGCCGCCCATTTCGTTGTAGAGGGAGTGCAGCGCGCGGTAGGTGTTCGACTTC 3149 Query 22414 GCGAAAATCATCAGCATCAAGCGCGTGACGTTCGCCAGCCACGCCTTGACGGCGGCGGAC 22473 ||| | ||| |||| | ||||||| |||||||| ||| ||||| |||| Sbjct 3148 TGGAAGACGGCCAGGATCAGACCGGTGACGTCGTCCAGCCACTGCTTCACGGCCTGGGAC 3089 Query 22474 TCGTCCAGTTCGGGAATCGAGGTTG----TCAGGCGGAACCAGGGGCGGGCTGGGCTGGT 22529 | || || | || ||| ||||||||||||| || || || || || Sbjct 3088 TTCATCATCTCTG----CGTCCTTGACCTTCAGGCGGAACCACGGCCGAGCCGGCGAAGT 3033 Query 22530 CATGCCCGCCATCATCCCCGCAGCGAGCACGCGCAGCGCGCGCGTGCCGGTGTTGTCGAG 22589 ||| |||||| || || | ||||||||||| || | || ||||| |||| Sbjct 3032 GGCGCCGCCCATCAGGCCAGCGGACAGCACGCGCAGTGCCCTGGTACCGGTCGAGTCGTA 2973 Query 22590 GATGTTGTTGTGCCGCTTCTCGCCGCGGTTGCGATCTTGCACGAAGAAGCGCCCCGCGCG 22649 |||| ||||||||| ||||||||||||||| || | | ||||||||||||| ||| Sbjct 2972 GATGGAGTTGTGCCGGCGCTCGCCGCGGTTGCGGTCCTCGATGAAGAAGCGCCCCTGGCG 2913 Query 22650 CGGCAGCAGGTAGTCGCTGATTTCCTTCCAGTGCGACATCCAGCTTTCGCGCTCG---GT 22706 |||||||||| | | ||| |||| ||||||||| | |||||| |||||||| | Sbjct 2912 GGGCAGCAGGTTGCGGGAGATCTCCTGCCAGTGCGAGAACCAGCTGGCGCGCTCGCGCTT 2853 Query 22707 GCGCAGTTGCCCCCAGCGCGAAAGCAGCAGTTTGCGCTCGGTTTGCTCGGCCACGTTA-T 22765 | ||| || |||||||| |||||| | ||||| || || ||||| | | Sbjct 2852 GAGCA--TG-CCCCAGCGGTTCAGCAGCTGGTTGCGGGTAGTGGTCTGGGCCA--TCAGC 2798 Query 22766 TGC--------CCCAGCAGAGTGGACTTGCCCAGGGTGAGGGCCGATTGGTCAACGCCCT 22817 ||| |||||||| |||| |||||| || ||||| | |||| ||||| Sbjct 2797 TGCCCCCGCCGCCCAGCAGCGTGGTCTTGCCGAGCGTGAGCGTGCTCGGGTCGACGCCGG 2738 Query 22818 GCGGGCCGGTCAGCATGGTGCCGGACTGGCC 22848 ||||||||||||||||||||||| |||||| Sbjct 2737 CCGGGCCGGTCAGCATGGTGCCGGCCTGGCC 2707 Score = 203 bits (224), Expect = 9e-48 Identities = 385/553 (70%), Gaps = 23/553 (4%) Strand=Plus/Minus Query 18871 GTAGAAGGCCGGGCGGCCCATGCCCACGTTCGGGATGAGTTCGACCGCCTGGGTCATCAG 18930 |||||| ||||||||||||| ||| ||||| | | || | || || ||||||| Sbjct 6873 GTAGAACACCGGGCGGCCCATCGCCAGATTCGGCGGGCGGTCCATGGCGCGGATCATCAG 6814 Query 18931 GTCGATGA----GGTCG-----GCGCCCGC--GC-TGGCGTTTTT--CGTC-AGTTCGGA 18975 || ||||| ||||| ||| | || || ||||| | | || | || |||| Sbjct 6813 GTTGATGATTGCGGTCGCGGCGGCGGCTGCCTGCGTGGCGCTCTGGCCGACCAGGTCGGT 6754 Query 18976 CACGTCCACATTGGCGATGCGGACGACGTAACGCCAGTCGCGCAGGGTCAGGCCGATGTC 19035 ||||| | || |||||||||||||| || |||||||| | ||||||| | | Sbjct 6753 CACGTTGATGTTCGCGATGCGGACGACATAGCGCCAGTCCTTGACCACCAGGCCGTTCTT 6694 Query 19036 CCACTTGTAGTGGGTGCGGTAGC-CCTGGTAGCGGCCGCCGGCGGCGTCGATCAGCGTGT 19094 ||||| ||| | | || ||| ||||| || | |||| || |||| | || | Sbjct 6693 CCACTGGTACAGCGCACGC-AGCGCCTGGAAGAAGTTGCCGTTGGAGTCGGGGACCGACT 6635 Query 19095 CCTCGCCGAGGTCACGCGATTGCAGGCCGGCCTGCGAACCCTTCGGGTAGATGGTATGCA 19154 | ||||| ||||| | |||||||| || | ||||||||||||| | || | | | Sbjct 6634 CTTCGCCCAGGTCCTGGTGCTGCAGGCCAGCTTTCGAACCCTTCGGGAACG-GGCA-GAA 6577 Query 19155 G--GGTGTTCGGCCCCCACACCGTCAGCCAGATGGATGCGTTGTCGCTGCCCGTGCCGCC 19212 | ||||||| ||||||||| ||| ||||||| | ||||| | |||| ||||| || Sbjct 6576 GACGGTGTTCTCACCCCACACCACCAGGTAGATGGAGGTGTTGTTGGTGCCGGTGCCACC 6517 Query 19213 GGCGTCGATGATGTTCTGGCCGTTCTCCGCGGACAGGCTGTTGAAGCGCGGCGTCAGGCC 19272 |||||||| |||||||||||||||| | ||| ||| | || | || | |||||| Sbjct 6516 GGCGTCGAGGATGTTCTGGCCGTTCCCAGCGCTCAGCGAGCTGTAACGGGTTTGCAGGCC 6457 Query 19273 CATGAACTT-CTCGGCGTCGATGCTGGAATCGCCGTAGAACAGCGTGGTCGCCTGGGTCT 19331 || ||||| | ||| |||| ||| | | |||||||||| | | ||| ||||| Sbjct 6456 CAGGAACTGGCGCGG-GTCGGTGCCCGGGTTACCGTAGAACATGGCGCCGGCCATGGTCT 6398 Query 19332 GGTTCATGCCTTCGATGAAGGCGCGGTCTTCGGACAGGCGCCAGGCGGCGGAATTGCCGT 19391 ||||||| | ||||||||||| |||||| |||||||| ||||||| ||||||| Sbjct 6397 GGTTCATCGCCTCGATGAAGGCTTCGTCTTCCGACAGGCGGAAGGCGGCTTCGTTGCCGT 6338 Query 19392 TGAGGTCGGCCAG 19404 | || | ||||| Sbjct 6337 TCAGCTTCGCCAG 6325 Score = 129 bits (142), Expect = 2e-25 Identities = 194/272 (71%), Gaps = 4/272 (1%) Strand=Plus/Minus Query 17664 CGGCAGTACGGCCACGATCTTGATGGCGTCGGCGGGCTGGGCGTAGGCGAAGCGCCACT- 17722 |||||| | | ||| | ||| | | ||| || ||| | || ||||| | ||||| Sbjct 8552 CGGCAGGATGCCCAGTACCTTCAGGCAGTCAGCCGGCCGCGCATAGGCATGGTTCCACTG 8493 Query 17723 CGGGC-CGGGAAATGCCCATCGCGGCAAGCTGCGCGCATTTGGTGGCGAAACCCCAGGTG 17781 |||| |||| | ||| | |||| ||| |||| | | |||||||| ||||| Sbjct 8492 CGGGAACGGGT--TCACCAGCTCGGCCAGCAGCGCACGGGTAGTGGCGAAGCCCCACTCC 8435 Query 17782 TGCAGTTCGAGCAGCGAGTCGCGCGCGAACGGATAGAAGCGCGCGCAGTATTCCGCCTGC 17841 |||| ||||||||| |||||||| |||| ||| || | | ||||||| || || || Sbjct 8434 TGCATTTCGAGCAGGGAGTCGCGTGCGATCGGGTACCACCTTGCGCAGTGCTCGGCTTGT 8375 Query 17842 ACGGAACCCTCGGGCGGGTTGATGCCCGCCACCGTGGCCTCGTCGCCCAGGTAGGCCAGG 17901 || || |||||||||| ||||| ||||| || || |||||| |||| ||||||| Sbjct 8374 GACGACCCTTCGGGCGGGTCGATGCTGGCCACGGTCGCGCTGTCGCCAAGGTGGGCCAGG 8315 Query 17902 GCCAGATTGCAGATGTCAACCTCGGATGCCAT 17933 ||||| |||||||| || || || |||| ||| Sbjct 8314 GCCAGGTTGCAGATTTCTACTTCAGATGACAT 8283 Score = 98.7 bits (108), Expect = 3e-16 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 14740 CCTGCGCCCGGTAGCCCCAGGCAGTACGCGCAGCATTGGCGCGCAGCGTGTCGGTGTCGA 14799 ||||| || | ||||||||| | ||| | || |||||| | |||| | ||||| Sbjct 11396 CCTGCATGCGCTGGCCCCAGGCCGCGCGCACGGCGTTGGCGGTGATGGTGTTGATGTCGT 11337 Query 14800 TCTGCTTCACGATGTCGCTGGAAACCTGCACCTCGGCGGCGCTGCCTTCGCCCAGGTCGA 14859 ||| ||| | | |||| |||| | |||||||||| |||||||| || || || | Sbjct 11336 TCTCCTTGGCCAGGTCGGTGGACGTCAGCACCTCGGCCGCGCTGCCGGTACCGAGATCCA 11277 Query 14860 TGCCGTTGGCGGCCAGCGCCGCACGCTGGGCGCCTTTAAGTTGCCCGGC 14908 ||| |||||||| |||||||||||||| ||||| || | || ||||| Sbjct 11276 CGCCATTGGCGGCGAGCGCCGCACGCTGCGCGCCCTTTACCTGGCCGGC 11228 Score = 96.9 bits (106), Expect = 9e-16 Identities = 173/250 (69%), Gaps = 11/250 (4%) Strand=Plus/Minus Query 20373 GCGGCTTCCGTCATCAGCGTTTCGGTTGTCATGGTTC---TGTTCCTTCACCAT---CAC 20426 || || || || ||||| ||||| || ||| ||| || ||||||| ||| ||| Sbjct 5220 GCCGCGTCGGTGATCAGGGTTTCTCCTGGCAT--TTCGATTGCTCCTTCATCATGGTCAC 5163 Query 20427 GGCATAGAGTTCAGGGCAGAGCGTGTGGATTTGCGCCAGTAGCCGCAGGCCCTCGTTCCG 20486 | ||||| |||||||| |||| ||||| ||||| || || |||||||| || || Sbjct 5162 G---TAGAGGTCAGGGCACAGCGCATGGATCTGCGCGAGCAGGCGCAGGCCTTCCGAGCG 5106 Query 20487 GTTCCCTTCGGCGAAGGCCATAGCCATCGCGTTGGTGTTGAACGAAAGCCGGTACACGCC 20546 | ||||||| ||| |||||| ||| ||| ||| || ||| | || | ||||| Sbjct 5105 GCGCCCTTCGTTGAAAGCCATATTCATGGCGGTGGGGTCGAAACTGGACTGGAAGACGCC 5046 Query 20547 GGCTCGTTCCAGAAAGCGCCACACGATGCGGCGCCCCCGCTTGCTGCTCATGAGCCACTT 20606 ||| |||| |||||||||||||||||| || || | | ||| | ||||| Sbjct 5045 GGCGGCGGCCAGCTGGCGCCACACGATGCGGCGGCCGCGTGGGTCGGCCATCAACCACTG 4986 Query 20607 AAAGTCCGCT 20616 ||| || ||| Sbjct 4985 AAAATCGGCT 4976 Score = 87.8 bits (96), Expect = 5e-13 Identities = 122/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 19799 GTCTTCACTGATTGCCAGGCCGGCCCGGTAGAACACCCGGATGATTTCGGGGTGATTGCC 19858 |||||| || || ||| |||||| ||| | | || | | |||||||| || || Sbjct 5842 GTCTTCGCTAATGGCCTTGCCGGCGCGGACCATGAAGCGCACCAGCTCGGGGTGGTTCCC 5783 Query 19859 CAGGCCGGTTTTGTTCAGCAGCGTGGTGAGTTCGGGCGTGCCGAAGGCGTCGCGCGCCTT 19918 ||||||||| | | ||||| ||| | || || || || |||||| |||| |||||| Sbjct 5782 CAGGCCGGTCTCGCGCAGCATCGTCTTCAGCTCCGGGCTGGCGAAGGTGTCGACCGCCTT 5723 Query 19919 CTTGGCCGTGGCAAGGTTTTCTTGCAGCTTGTCGCCGCCGAACTCCTTGTC 19969 |||| | | ||||| || |||||||||||||||| | |||||||| Sbjct 5722 GGTGGCGTAGCCCAGGTTCTCGGCCAGCTTGTCGCCGCCGTATTCCTTGTC 5672 >seq900453 Length=1166 Score = 197 bits (218), Expect = 4e-46 Identities = 315/444 (71%), Gaps = 20/444 (5%) Strand=Plus/Minus Query 9403 CAGCCACTGCATGTCGCGCAGGCCGCGGGCTTGCAGGTCTTGAATAGCGTCGTTGGTCGC 9462 |||||||| ||||||| |||| | |||| || ||||| || | || | | || ||| Sbjct 634 CAGCCACTTCATGTCGTGCAGCGCCCGGGTTTCAAGGTCATGGGTGGCCTTCTCGGCCGC 575 Query 9463 GTCCACGCCGAGGGCCTGATAGGCAGCGAATTCTTCGGGCGTCATGCCAGCCTGTTCCGC 9522 || | || ||| || | ||||| | |||| ||| |||||| || |||| Sbjct 574 ATCGATGCTGAGCGCGCGGTAGGCCGTCCATTCCTCGTCGGTCATGA-AG-----TCCGG 521 Query 9523 CGTGG---CGAACAGT--GGCATCATGCTGCGGCCCTGTTCGGCCAGTGCGATCTGCTCG 9577 | ||| |||||| |||| | |||| | | |||||||| | | |||| ||| Sbjct 520 CTTGGTGCCGAACATCCCGGCAA-ACCCTGCCTCGC-GTTCGGCCTGGGTGATCGCGTCG 463 Query 9578 CCGGTGGCGAGCATCCGGTCGAACACGTTGCGCACCTCGGGCGTGAGTTCGACGTTCAGG 9637 | |||| ||||| |||||||| ||| |||||||||||||| || | |||| ||| Sbjct 462 GTGCTGGCCAGCATGCGGTCGAAGACGCCGCGCACCTCGGGCGACAGCTGCACGTCCAGC 403 Query 9638 GCCTTCAAGTCGCGGTACACGTTGAGCAGCCACGCGCGGAACCGCTGGAAAAGGC--CGT 9695 ||| || ||||||||||| | |||||| |||||| ||| |||||| | | Sbjct 402 GCCGCCAGCGAACGGTACACGTTCACCAGCCAGCTGCGGAAACGC--GAAAAGACACCCC 345 Query 9696 GCATTTCAATGCTGGGCGCCTTGCCCTCGAAGAGATACGCCTCGAAGCCGCGGGCGAACT 9755 | | ||| || ||||||| |||| ||||| ||||| |||||||||||||||||||||| Sbjct 344 GGAGTTCGCGGCCGGGCGCCGTGCCTTCGAACAGATAGGCCTCGAAGCCGCGGGCGAACT 285 Query 9756 GCTCGTGGTGGGCGCGCTTCGCCTCGAAGTCCAGATCGTTCCACGCGGCCAGGTCGCGCA 9815 |||| || | | |||||| |||| | ||| || |||||| | ||||||||| ||| Sbjct 284 GCTCATGCAGCGGGCGCTTTTCCTCCATGTCGAGCGTGTTCCAGGTGGCCAGGTCCGGCA 225 Query 9816 CGCCGAACCAGTCAAGCAGCGTTT 9839 |||||||||| || |||||||| Sbjct 224 CGCCGAACCATTC---CAGCGTTT 204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132503743095710