Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_006548.1 Length=38439 Score E Sequences producing significant alignments: (Bits) Value seq833845 89.7 1e-13 >seq833845 Length=260 Score = 89.7 bits (98), Expect = 1e-13 Identities = 124/171 (73%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 26025 CCCAGCCCATCATCCCCTGGATAGGGGGAAAGCGCCGCCTCGCTGAC-CGCATCTTCCCG 26083 || |||||||||| ||||| || || ||||||||||| |||| | | ||| ||| Sbjct 170 CCAAGCCCATCATTTCCTGGCCGGGCGGCAAGCGCCGCCTA-CTGAAGCACCTCTATCCG 112 Query 26084 CTTTTCCCACGCCACTCCTGCTATGTCGAGCCTTTCGCAGGTGGGGCGGCACTGTTCTTC 26143 | |||||| ||| |||||| |||||| | ||||| || || || || | | | Sbjct 111 CACTTCCCAACCCATGACTGCTACGTCGAGGCATTCGCCGGCGGCGCCGCGTCGCTGCTG 52 Query 26144 CTACGGCCGGTGCCGGCGGATGTGGAAGTGCTCAACGACATCAACGGCGAC 26194 | |||||| ||||| | ||||||| ||||||||||||||||||||| Sbjct 51 ATGCGGCCGTATCCGGCCCAGATGGAAGTCCTCAACGACATCAACGGCGAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119851047900562