Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_009234.1 Length=35741 Score E Sequences producing significant alignments: (Bits) Value seq50522 86.0 1e-12 >seq50522 Length=209 Score = 86.0 bits (94), Expect = 1e-12 Identities = 116/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 5230 GGGAAGAAGGACGGCATCCAGCTCATTCCCGTGTCCGAGGTCGCCGCGAAGGACGAGTTC 5289 || |||||||| || | ||||| || || | ||| || || || ||||| |||||| Sbjct 36 GGCAAGAAGGATGGATTGCAGCTGATCCCGATCAGCGAAGTGGCGGCCAAGGATGAGTTC 95 Query 5290 TTCAACATCAAGAACGTGACGCGCGACGATCTGCTCGCCGCGCACCGCGTGCCGCCGCAG 5349 | ||||||| ||||| || || || | || ||||||| ||| | || |||||| Sbjct 96 ACCGGCATCAAGCGTGTGACTCGTGATGACATTCTGGCCGCGCTGCGCATACCCCCGCAG 155 Query 5350 TTGCTCGGCATCGTGCCGAGCAATTCGGGCGGGTTCGGCACG 5391 |||| |||||||||||| ||| | || || |||||| || Sbjct 156 CTGCTGGGCATCGTGCCGCAGAATGCCGGTGGCTTCGGCTCG 197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 111430482622686