Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_009236.1 Length=36690 Score E Sequences producing significant alignments: (Bits) Value seq50522 89.7 1e-13 >seq50522 Length=209 Score = 89.7 bits (98), Expect = 1e-13 Identities = 117/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 5285 GGGAAGAAGGACGGCATCCAGCTCATTCCCGTGTCCGAGGTCGCCGCGAAGGACGAGTTC 5344 || |||||||| || | ||||| || || | ||| || || || ||||| |||||| Sbjct 36 GGCAAGAAGGATGGATTGCAGCTGATCCCGATCAGCGAAGTGGCGGCCAAGGATGAGTTC 95 Query 5345 TTCAACATCAAGAACGTGACGCGCGATGACCTGCTCGCCGCACACCGCGTGCCGCCGCAG 5404 | ||||||| ||||| || |||||| | || ||||| | ||| | || |||||| Sbjct 96 ACCGGCATCAAGCGTGTGACTCGTGATGACATTCTGGCCGCGCTGCGCATACCCCCGCAG 155 Query 5405 TTGCTCGGCATCGTGCCGAGCAATTCGGGCGGGTTCGGCACG 5446 |||| |||||||||||| ||| | || || |||||| || Sbjct 156 CTGCTGGGCATCGTGCCGCAGAATGCCGGTGGCTTCGGCTCG 197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114392349356824