Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_009603.1 Length=46365 Score E Sequences producing significant alignments: (Bits) Value seq1870542 80.6 8e-11 >seq1870542 Length=242 Score = 80.6 bits (88), Expect = 8e-11 Identities = 80/104 (77%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 42809 CCGAAGCGCAGGGCGTCCATGACCGCGACCGGGCGAGCGCCCATGGAGATGATGTCGCGG 42868 |||||||| || | || | | |||| || || ||||||||||| | | ||||||| Sbjct 109 CCGAAGCGAAGCGAGTTGAGCAGGGCGATGGGACGCGCGCCCATGGAAAACACGTCGCGG 50 Query 42869 ACGATGCCGCCCACACCCGTCGCCGCGCCCTGGAAGGGCTCGAT 42912 | ||||||||||| || ||||| ||||||||| | |||||||| Sbjct 49 ATAATGCCGCCCACGCCAGTCGCTGCGCCCTGGTACGGCTCGAT 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144588409054174