Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_011043.1 Length=41181 Score E Sequences producing significant alignments: (Bits) Value seq28963 123 6e-24 >seq28963 Length=574 Score = 123 bits (136), Expect = 6e-24 Identities = 128/168 (76%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 15382 GACGCCAGCGGACTCGAACTCCGTTGTCTGGCACACTTCATGTCTAAGTACGACGACGGG 15441 |||||| ||| | || || || || ||||| ||||||||| | ||| |||||| ||| Sbjct 168 GACGCCTCGGGATTGGAGCTGCGCTGCCTGGCGCACTTCATGGCAAAGCACGACGGCGGC 109 Query 15442 GCATATGCGGATGTCATTCTCAACGGTGATATACACACAGTCAACCAAACGGCGGCTGAG 15501 | || || | ||||| ||| | || || || ||| | ||||||||| ||||||| | Sbjct 108 GAGTACGCCAAGGTCATCCTCGAAGGCGACATCCACTCCGTCAACCAATCGGCGGCAGGA 49 Query 15502 TTGCCAACACGTGATAACGCCAAGACATTCATCTACGGTTTCCTCTAT 15549 ||||||| || || ||||||||||| |||||||||| ||||||||| Sbjct 48 CTGCCAACCCGCGACAACGCCAAGACCTTCATCTACGCCTTCCTCTAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128408938927966