Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_011045.1 Length=38841 Score E Sequences producing significant alignments: (Bits) Value seq28963 91.5 4e-14 >seq28963 Length=574 Score = 91.5 bits (100), Expect = 4e-14 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 14053 GAGTTGCGCTGCCTGGCTCACTTCATGGCTCGATTTGATAACGGTGAGTACGCTCACGAG 14112 ||| ||||||||||||| ||||||||||| || ||| |||||||| | | Sbjct 153 GAGCTGCGCTGCCTGGCGCACTTCATGGCAAAGCACGACGGCGGCGAGTACGCCAAGGTC 94 Query 14113 ATTCTTAATGGTGACATCCACACTAAGAACCAGATGGCTGCTGAACTGCCTACCCGCGAT 14172 || || | || ||||||||| | ||||| ||| || | |||||| |||||||| Sbjct 93 ATCCTCGAAGGCGACATCCACTCCGTCAACCAATCGGCGGCAGGACTGCCAACCCGCGAC 34 Query 14173 AACGCTAAGACGTTCATCTACGGGTTCCTTTAT 14205 ||||| ||||| |||||||||| ||||| ||| Sbjct 33 AACGCCAAGACCTTCATCTACGCCTTCCTCTAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121105705884886