Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_011055.1 Length=76312 Score E Sequences producing significant alignments: (Bits) Value seq833769 118 5e-22 >seq833769 Length=269 Score = 118 bits (130), Expect = 5e-22 Identities = 128/170 (75%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 57823 CGAGATGTGGGAGCAATGCCTGCGGGTCCTCAAGCCCGGTGGGCACCTGCTCGCCTTCGG 57882 ||| || |||| ||| |||||||| || || ||||| || || || || || ||||||| Sbjct 220 CGATATCTGGGCGCAGTGCCTGCGCGTACTGAAGCCTGGCGGCCATCTACTGGCCTTCGC 161 Query 57883 CGGCTCCCGCACCTGGCACCGGCTGACCGTGGCCATCGAGGACGCGGGCTTCGAGATTCG 57942 ||| | |||||| ||| || || |||| ||||||||| ||||| |||||||| || Sbjct 160 AGGCACGCGCACCCAGCATCGCATGGCCGTTCGCATCGAGGATGCGGGTTTCGAGATCCG 101 Query 57943 TGACTCCATCGCCTGGCTGTACGGCAGCGGGTTCCCGAAGTCGCTCGACG 57992 ||| ||||||||| | |||||| || ||||||||||| | | ||| Sbjct 100 CGACATGATCGCCTGGGTCTACGGCTCGGGCTTCCCGAAGTCACACAACG 51 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 237892578024053