Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_011104.1 Length=39989 Score E Sequences producing significant alignments: (Bits) Value seq55220 84.2 5e-12 >seq55220 Length=256 Score = 84.2 bits (92), Expect = 5e-12 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 26290 CAACATGCCGACACAACGAGCAATGGACTTAGGCCTGTTCGATATCAAGGAACGCACATT 26349 ||||||||| || || ||| | ||||| | || ||||| || |||||| ||| || | Sbjct 223 CAACATGCCAACGCAGCGATCCATGGAACTCGGACTGTTTGAGATCAAGACACGTACCAT 164 Query 26350 CCAGAACCCAGATGGTAGCGTGCGAATCACCAAGACGACCAAGGTAACCGGAAAAGGCCA 26409 | | || ||||| || || |||||| | ||||||||||| ||||| || || || || Sbjct 163 CAACAATCCAGACGGAAGTGTGCGAGTAACCAAGACGACGAAGGTCACTCCCAAGGGACA 104 Query 26410 GCAGTATTTTATCAACAAGTT 26430 | ||| || | |||||||| Sbjct 103 GGTGTACTTCGTGAACAAGTT 83 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124688659531662