Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq900588 711 0.0 seq94777 560 1e-154 seq174834 196 6e-45 seq747441 132 6e-26 seq219505 114 2e-20 seq2075000 109 7e-19 seq143040 107 2e-18 seq124049 107 2e-18 seq780762 98.7 1e-15 seq20701 96.9 4e-15 seq272447 87.8 2e-12 seq188012 84.2 3e-11 seq1984290 82.4 9e-11 seq1972347 82.4 9e-11 >seq900588 Length=4557 Score = 711 bits (788), Expect = 0.0 Identities = 755/993 (76%), Gaps = 2/993 (0%) Strand=Plus/Minus Query 7529 TCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATG 7588 ||| ||||||| | ||| ||||||||||||||||||||||| |||||||| |||||||| Sbjct 3991 TCAACAGCAGCTAAGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATA 3932 Query 7589 CCAAGACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCA 7648 ||||| ||||||||||| | || ||||| || || | || |||||||||| |||| Sbjct 3931 CCAAGGTTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCA 3872 Query 7649 ATGATGGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGA 7708 | | || |||||||| |||||||| || |||||||| ||||| || |||| ||| | | Sbjct 3871 ACTACAGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACCTAAA 3812 Query 7709 GCAGTGAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAG 7768 |||||||||||||| || || || ||||| || || | ||||||||| | ||||| ||| Sbjct 3811 GCAGTGAACCAGATTCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAG 3752 Query 7769 TTGTTGAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATG 7828 |||||||| ||| ||||||||||| | || ||||| || || |||||||| || || Sbjct 3751 TTGTTGAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATA 3692 Query 7829 TTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTG 7888 || || |||||||| |||||||| || || ||||| | || || ||| ||||| Sbjct 3691 TTATAAGTCTCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTA 3632 Query 7889 GTTTCACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCA 7948 ||||| | | || | ||||||||| | ||||||||||| |||||||| || ||||| Sbjct 3631 GTTTCCCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCG 3572 Query 7949 CCAAAGACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCT 8008 || || |||||||| || || | ||||||||| || ||||| ||||||||||||||||| Sbjct 3571 CCGAATACACCAGCTACACCTAACATGTGGAATGGATGCATAAGGATGTTGTGCTCTGCC 3512 Query 8009 TGGAAGACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAAA 8068 ||||| |||| ||| ||||||| ||||||||||| || | ||||||| | ||||| || Sbjct 3511 TGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAAAGGCATACCATCAGAAAAG 3452 Query 8069 GAACCTTGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAG 8128 |||||||| | ||| || | | ||| ||||||| || || ||||| ||||| || Sbjct 3451 CTTCCTTGACCAATAGGGTAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAA 3392 Query 8129 TATGCTACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACCC 8188 ||||| ||| ||||| ||||||||||| |||||| || ||||||||||||||||||| Sbjct 3391 TATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCC 3332 Query 8189 ATGTATGCATAGATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGTTG 8248 || || | | ||| | | |||||| | | || || | |||||||||| ||| Sbjct 3331 ATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTG 3272 Query 8249 TAGAGCCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGAGACCAATAGCG 8308 || | ||||||||||| ||| || |||||||| || || || ||||| | || || || Sbjct 3271 TATAACCACTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATCGCC 3212 Query 8309 TTAGAAGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATGAGCGAACCAGCG 8368 ||||| ||||| || |||||||||||| || ||||| ||||| | | ||||||| Sbjct 3211 GCAGAAGTAGGAATAATAGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAA 3152 Query 8369 ACGGGTTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAGCGACGATGAA- 8427 || || || || || || ||||| || || ||||| ||||||| ||| |||| || || Sbjct 3151 ACAGGCTCGCGAATACCATCAATATCTACTGGAGGGGCAGCGATGAAGGCGATAATAAAT 3092 Query 8428 ACAAATAGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAACCAACCGACATACAG 8487 ||| | || || | | | ||||| ||||||| ||||||||||| |||| || || Sbjct 3091 ACAGA-AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAG 3033 Query 8488 ACGATTGTTGGTGGAGGTTACCCAGTTACAGAA 8520 |||||| | ||| |||| |||||| ||||| Sbjct 3032 ACGATTTTCAGTGCTAGTTATCCAGTTGCAGAA 3000 >seq94777 Length=2712 Score = 560 bits (620), Expect = 1e-154 Identities = 729/1003 (73%), Gaps = 4/1003 (0%) Strand=Plus/Minus Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322 |||||||| || | ||| | || || ||||| |||| || |||||||| || |||||| Sbjct 2078 AGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGATTTTCATGAGGCTGATCC 2019 Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382 | ||||||||| ||||| | ||| || || || || || || ||||| ||||| ||| Sbjct 2018 TGAGCTGCCATCCACGCACGAATACCCTCGTTTAAAAGAATATTTTTGGTGTAGAAAGTC 1959 Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442 ||||| || ||||| |||||||| | ||| || || |||||||||||||| || | | | Sbjct 1958 TCGAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACAAAGTCATAGGCACGTAAG 1899 Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAAC 6502 || || || | |||| | ||||| | |||| | ||| | || || ||||| Sbjct 1898 TTCAGAGCCAAGCCAACTACGCCAATAGCACTCATCCATAAACCGGTGACGGGTACAAAT 1839 Query 6503 AGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAG 6562 |||||||||||||||| |||||| |||||| || || | ||||||||| || ||||| Sbjct 1838 AGCATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACACCAAAGATTTGGGACCAA 1779 Query 6563 AAACGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACGCCTTG 6622 || || ||||| |||||||| ||||| || || || |||| || || | ||| || | Sbjct 1778 AAGCGGTTAGCAGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGCACGG 1719 Query 6623 AAAGTATTTGATTGTTCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATA 6682 || ||||||| ||||| || ||||| | ||| || ||||| || || || |||||| Sbjct 1718 AAGGTATTTGCACCATCACCGTCCTCAAATAGAGTGTTTTCTACGGTTGCTCCATGAATA 1659 Query 6683 GCACAGAGCAATGCTCCACCTAAGATACCTGCTACACCCATCATATGAAACGGGTTGAGC 6742 || || |||| || | ||||| | || || || |||||||||||||| ||||| | | Sbjct 1658 GCGCATAGCAGAGCCGCGCCTAATACTCCGGCAACTCCCATCATATGAAATGGGTTCAAC 1599 Query 6743 GTCCAGTTGTGGAAGCCCTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCAACACCAAAC 6802 ||||| || || || || || | ||| || | ||| || ||||||||||| || ||||| Sbjct 1598 GTCCAATTATGAAATCCTTGGAAGAAAAGGATGAATCGAAATATCGCTGCTACGCCAAAA 1539 Query 6803 GACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACACAAAG 6862 ||||||||||||||||| || || || || ||||| || || || || || ||||| Sbjct 1538 CTCGGCGCAAAGAACCAACCAGATTGCCCCAGTGGATAAATAAGGAATACCGAAACAAAA 1479 Query 6863 ACAGCAATGGGACCAGAAAACGCGATTGCATTGTAGGGACGAATACCGACTAGA-CGTGC 6921 |||||||| |||||||| || | ||||||||| || || || | | || ||| || || Sbjct 1478 ACAGCAATTGGACCAGAGAATGAGATTGCATTATAAGGCCGCA-ATTGAACAGACCGAGC 1420 Query 6922 GATCTCAAACTGCCGAAGCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCCACAAA 6981 | ||||| || || | |||||||||||| || ||||| || |||||||| || ||||| Sbjct 1419 AAGTTCAAATTGGCGTAACATGAAACCTATTAGTGCAAAAGCCCCGTGGAGAGCTACAAA 1360 Query 6982 AGGCCATAGTCCCCCAAGTTGGAGCCAGCGGACGAAATCTCCCTGAGCTTCTGGACCCCA 7041 || |||||| || || | ||| ||| || |||||||| || |||||||| ||||| Sbjct 1359 AGTCCATAGACCGCCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCTGGCCCCCA 1300 Query 7042 TAGAAGAAGTAGGGAATGTCCGAGAGCGTCAGCAGGAGTTGATACAGCAGCAGTAAGGAA 7101 ||| || | | || ||| | | | | ||||| || || || || || || | ||| Sbjct 1299 TAGTAGCAACAAAGAGTGTGCTAAACTATTGGCAGGGGTAGAAACTGCTGCGGTTAAGAA 1240 Query 7102 ATTACATCCCTCAAGATACGAAGAAGCAATCCCGTGAGTGTACCAGCTCGTGACGAAAGT 7161 |||||| || || | ||| ||| || | || || || ||||| || || ||||| Sbjct 1239 ATTACAACCTTCCAAATAGGAACTTGCCAATCCATGGGTATACCAAGAAGTTACAAAAGT 1180 Query 7162 TGTGCCCGTGAGCCAACCGCCCAGTGCCAGGTAAGCAGTAGGGAACAGAAGAAGACCTGA 7221 ||| || || | |||||| || | || | |||||| ||| || || | || || || Sbjct 1179 TGTCCCTGTAAACCAACCCCCTAAAGCGAAATAAGCACAAGGAAAGAGCAATAGGCCAGA 1120 Query 7222 CCAACCAACAAAAACGAACCTATCAC-GCTTAAGCCAGTCATC 7263 ||| || ||||||||||| | || | | ||| ||||||||| Sbjct 1119 CCATCCTACAAAAACGAAACGGTCCCTTCGTAA-CCAGTCATC 1078 >seq174834 Length=1002 Score = 196 bits (216), Expect = 6e-45 Identities = 411/604 (68%), Gaps = 9/604 (1%) Strand=Plus/Plus Query 6640 ACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATAGCACAGAGCAATGCTCC 6699 ||| || ||||| | ||| || | || | || || ||||||| || || || || | Sbjct 1 ACCGTCCTCAAATAGAGTGTTTTGTATGTTTGCTCCATGAATAGTGCATAGAAAAGCCAC 60 Query 6700 ACCTAAGATACCTGCTACACCCATCATATGAAACGGGTTGAGCGTCCAGTTGTGGAAGCC 6759 ||||| | || || | |||||||||||||| | || | |||||| || || || || Sbjct 61 GCCTAATACTCCGGCAAATCCCATCATATGAAATAGATTCAACGTCCAATTATGAAATCC 120 Query 6760 CTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCAACACCAAACGACGGCGCAAAGAACCA 6819 || | ||| || | ||| || ||||| ||||| |||||||| ||| ||||||||||| Sbjct 121 TTGGAAGAAAAGGATGAATCGAAATATTGCTGCTACACCAAAACTCGGTGCAAAGAACCA 180 Query 6820 ACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACACAAAGACAGCAATGGGACCAGA 6879 || | || ||||| ||||| | ||||| ||||| ||||| | |||||| ||||||| Sbjct 181 ACCATATTG-CCGAGTGGATAACTAAGAAATACAGAAACAAAAATAGCAATTAGACCAGA 239 Query 6880 AAACGCGATTGCATTGTAGGGACGAATACCGACTAGA-CGTGCGATCTCAAACTGCCGAA 6938 || | ||||||||| || | | || ||| || || |||| || | | Sbjct 240 GAATGAGATTGCATTATAANNNNNCA-ATTGAACAGACCGAGCACGTTCAAGTTGGTGTA 298 Query 6939 GCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCCACAAAAGGCCATAGTCCCCCAA 6998 |||||| ||||| || ||||| || |||||||| || ||||||| |||||| || || | Sbjct 299 ACATGAACCCTATTAGTGCAAAAGC-CCGTGGAGTGCTACAAAAGTCCATAGACCGCCTA 357 Query 6999 GTTGGAGCCAGCGGACGAAATCTCCCTGAGCTTCTGGACCCCATAGAAGAAGTAGGGAAT 7058 ||| ||| || |||||| | || |||||||| |||||||| || | | || | Sbjct 358 ATTGACACCAACGACTAAAATCTACATGTGCTTCTGGCCCCCATAGTAGCAACAAAGAGT 417 Query 7059 GTCCGAGAGCGTCAGCAGGAGTTGATACAGCAGCAGTAAGGAAATTACATCC-CTCAAGA 7117 || | | | | ||| || || | | || || | ||||||||| || | ||| | Sbjct 418 GTGCTAAACTATTGGCAAAGGTAGAAATTGTCGCTGTTAAGAAATTACAACCTCGCAA-A 476 Query 7118 TACGAAGAAGCAATCCCGTGAGTGTACCAGCTCGTGACGAAAGTTGTGCCCGT--GAGCC 7175 || ||| || | || ||||| ||| | || || ||||||| || || | || Sbjct 477 TAGGAACTTGCCAGTCCATGAGTATACAAAGAAGTTACATAAGTTGTTCCTGTAAAAACC 536 Query 7176 AACCGCCCAGTGCCAGGTAAGCAGTAGGGAACAGAAGAAGACCTGACCAACCAACAAAAA 7235 |||| || | | | |||||| ||| || || | || || |||| || ||||||| Sbjct 537 AACC-CCTAAAGAGAAATAAGCATAAGGAAAGAGCAATAGGCCATACCATCCTACAAAAA 595 Query 7236 CGAA 7239 ||| Sbjct 596 TGAA 599 >seq747441 Length=209 Score = 132 bits (146), Expect = 6e-26 Identities = 155/207 (75%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 6766 GAAGAGTAAGAAGCGGAATATCGCTGCAACACCAAACGACGGCGCAAAGAACCAACTGGA 6825 ||| || | ||| || ||||||||||| || ||||| ||||||||||||||||| || Sbjct 206 GAAAAGGATGAATCGAAATATCGCTGCTACGCCAAAACTCGGCGCAAAGAACCAACCAGA 147 Query 6826 CTGTCCGAGAGGATACATGAGAAAGACAGACACAAAGACAGCAATGGGACCAGAAAACGC 6885 || || || ||||| || || || || || ||||| ||| ||| |||| ||| || | Sbjct 146 TTGCCCCAGTGGATAAATAAGGAATACCGAAACAAAAACAAAAATTGGACGAGAGAATGA 87 Query 6886 GATTGCATTGTAGGGACGAATACCGACTAGA-CGTGCGATCTCAAACTGCCGAAGCATGA 6944 ||||||||| || || || | | || ||| || || | ||||| || || | ||||| Sbjct 86 GATTGCATTATAAGGCCGCA-ATTGAACAGACCGAGCAAGTTCAAATTGGCGTAACATGA 28 Query 6945 AACCTATAAGGGCAAAGGCTCCGTGGA 6971 ||||||| || ||||| || ||||||| Sbjct 27 AACCTATTAGTGCAAAAGCCCCGTGGA 1 >seq219505 Length=1904 Score = 114 bits (126), Expect = 2e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322 |||| ||| || | ||||| | || ||||| |||| || |||||||| ||||||||| Sbjct 1682 AGAGTGTTTCCACGTGGCAGAGCCTCCTCAGGGAATATAAGATTTTCATGAGGTTGATCC 1741 Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382 | | | ||||||| |||| | ||| || || || || || || || || | || ||| Sbjct 1742 TCGGCTTCCATCCACACACGAATACCCTCGTTTAAAAGAATATTTTTTGTGTCAAAAGTC 1801 Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442 || | || ||||| |||||||| | ||| || | |||||||||||||| || | | | Sbjct 1802 TCATATTCAGGATCTTCCGCTGCACAGATTTCCTAGGAAACAAAGTCATAGGCACATAAG 1861 Query 6443 TTAAGTGCAAGACCAATAATACCAAT 6468 || ||||| | ||||| | ||||| Sbjct 1862 TTCAGTGCCAAGCCAATTACGCCAAT 1887 >seq2075000 Length=209 Score = 109 bits (120), Expect = 7e-19 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 6755 AAGCCCTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCAACACCAAACGACGGCGCAAAG 6814 || || || | ||| || | ||| | ||||||||||| ||| ||| |||||||||| Sbjct 2 AATCCTTGGAAGAAAAGAATGAATCAAAATATCGCTGCTACATGAAAACTCGGCGCAAAG 61 Query 6815 AACCAACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACACAAAGACAGCAATGGGA 6874 |||||||| || || || || ||||| | || || | ||| | || ||| ||| ||| Sbjct 62 AACCAACTAGATTGCCCTAGTGGATAACTAAGGAATAAAGAAATGAAAACAAAAATTGGA 121 Query 6875 CCAGAAAACGCGATTGCATTGTAGGGACGAATACCGACTAGA-CGTGCGATCTCAAACTG 6933 ||||| || | ||||||||| || || || | | || ||| || || | ||||| || Sbjct 122 CCAGAGAATGAGATTGCATTATAAGGCCGCA-ATTGAACAGACCGAGCAAGTTCAAATTG 180 Query 6934 CCGAAGCATGAAACCTATAAGGGCAAA 6960 || | |||||||||||| || ||||| Sbjct 181 GCGTAACATGAAACCTATTAGTGCAAA 207 >seq143040 Length=3997 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 6659 TTCTCTACAGTAGCACCGTGAATAGCACAGAGCAATGCTCCACCTAAGATACCTGCTACA 6718 || ||||| | || || |||||||| | |||| || | ||||| || || || || Sbjct 3672 TTTTCTACGTTTGCTCCATGAATAGCGCGTAGCAGAGCCGCGCCTAATATTCCGGCAACT 3731 Query 6719 CCCATCATATGAAACGGGTTGAGCGTCCAGTTGTGGAAGCCCTGTAGGAAGAGTAAGAAG 6778 |||||||||||||| ||||| | |||||| || || || || || | ||| || | ||| Sbjct 3732 CCCATCATATGAAATGGGTTCAACGTCCAATTATGAAATCCTTGGAAGAAAAGGATGAAT 3791 Query 6779 CGGAATATCGCTGCAACACCAAACGACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGA 6838 | |||||||| | || ||||| | | ||||||||||||| || || || || ||| Sbjct 3792 CAAAATATCGCCGTTACGCCAAAACTCAGTGCAAAGAACCAACCAGATTGCCCCAGTGGA 3851 Query 6839 TACATGAGAAAGACAGA 6855 || || || || || || Sbjct 3852 TAAATAAGGAATACCGA 3868 >seq124049 Length=9620 Score = 107 bits (118), Expect = 2e-18 Identities = 247/366 (67%), Gaps = 6/366 (2%) Strand=Plus/Minus Query 6600 CTTGTGTAGGCTCAAACGCCTTGAAAGTATTTGATTGTTCACCATCTTCAAACAAAGTAT 6659 |||| || || | ||| || | || ||||||| ||| |||| | ||| | ||| | Sbjct 9616 CTTGAGTTGGGTTAAAAGCATGAAAGGTATTTGCACCATCATCATCCTAAAATAGAGTGT 9557 Query 6660 TCTCTACAGTAGCACCGTGAATAGCACAGAGCAATGCTCCA-CCTAAGATACCTGCTACA 6718 | |||| || || || |||||||| || || || ||| ||||| | || || | Sbjct 9556 TTTCTAG-GTTGCTCCATGAATAGCGCATAG-AAGACTCATGCCTAATACTCCGGCAAAT 9499 Query 6719 CCCATCATATGAAACGGGTTGAGCGTCCAGTTGTGGAAGCCCTGTAGGAAGAGTAAGAAG 6778 |||||||||||||| |||| | | ||| || || || || || | ||| || | ||| Sbjct 9498 CCCATCATATGAAATGGGTACAACTCCCA-TTATGAAATCCTTGGAAGAAAAGGATGAAT 9440 Query 6779 CGGAATATCGCTGCAACACCAAACGACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGA 6838 | | |||| || | ||||| | ||||||||||| ||| || || || || ||| Sbjct 9439 CAAAGTATCATTGTTGCGCCAAAACTCAGCGCAAAGAACTAACCAGATTGCCCCAGTGGA 9380 Query 6839 TACATGAGAAAGACAGACACAAAGACAGCAATGGGACCAGAAAACGCGATTGCATTGTAG 6898 | || || || ||||| |||| | |||| |||||||| || | ||||||||| || Sbjct 9379 CAAATAAGGAATACAGAAGCAAAAGTAACAATTGGACCAGAGAATGAGATTGCATTATAA 9320 Query 6899 GGACGAATACCGACTAGA-CGTGCGATCTCAAACTGCCGAAGCATGAAACCTATAAGGGC 6957 || | | | || ||| || || | ||||| || |||||||||||| || | Sbjct 9319 GGTTGCA-ATTGAACAGACCGAGCAAGTTCAAATTGNNNNNNCATGAAACCTATTAGTGT 9261 Query 6958 AAAGGC 6963 ||| || Sbjct 9260 AAAAGC 9255 >seq780762 Length=275 Score = 98.7 bits (108), Expect = 1e-15 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 7529 TCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATG 7588 ||| ||||||| | ||| ||||||||||||||||||||||| |||||||| |||||||| Sbjct 183 TCAACAGCAGCTAAGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATA 242 Query 7589 CCAAGACCAGCACGGTTGAGCACGTCTGCCCA 7620 ||||| ||||||||||| | || ||||| Sbjct 243 CCAAGGTTAGCACGGTTGATGATATCAGCCCA 274 >seq20701 Length=725 Score = 96.9 bits (106), Expect = 4e-15 Identities = 144/203 (71%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 6330 CCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTCTCGAACT 6389 ||||||| ||| | | | | ||||| || || || ||||| ||||| | ||| || | Sbjct 491 CCATCCACGCATGAATAACCTCATTTAAAGTAATATTTTTGGTGTAGAAAGCCTCAAATT 550 Query 6390 CTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGGTTAAGTG 6449 | |||| |||||||| | || || | |||||||||||||| || | | ||| || | Sbjct 551 CACGATCTTCCGCTGCACACATTTCCTAGGAAACAAAGTCATAGGCACGTAAGTTTAGAG 610 Query 6450 CAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAACAGCATAA 6509 | | |||| || ||||| | | || | ||| || |||| || ||| || |||| Sbjct 611 CCAAGCCAACTATGCCAATATCACTCATACATAAACCGATGACAGTAA-AAATAGGATAA 669 Query 6510 AGAAATGTAGCCAACGCTTATTG 6532 ||||||||| |||||| |||||| Sbjct 670 AGAAATGTAACCAACGTTTATTG 692 >seq272447 Length=1912 Score = 87.8 bits (96), Expect = 2e-12 Identities = 126/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 6505 CATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAGAA 6564 ||||||||||| || ||| || |||||| || || | ||||| ||| || ||||| | Sbjct 884 CATAAAGAAATATAACCAGCGTTTATTGGAAAAAGCAACACCAATGATTTGGGACCAATA 825 Query 6565 ACGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACGCCTTGAA 6624 ||| ||||| |||| || |||||| || || || |||| || || | ||| || ||| Sbjct 824 ACGGTTAGCAGTGATCACCGAATAAGTTTCTTCAACTTGAGTTGGTTTAAAAGCGCGGAA 765 Query 6625 AGTATTTGATTGTTCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATA 6682 ||||||| ||| | || | ||| | ||| || ||||| | | | ||||||| Sbjct 764 GGTATTTGCACCATCATCGTCCTAAAATATAGTGTTTTCTACTTTTACTCTGTGAATA 707 >seq188012 Length=2438 Score = 84.2 bits (92), Expect = 3e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 8108 GCTGCAGCAACTGGAGCAGAGTATGCTACACAGATCCAGGGACGCATACCTAGACGGTAA 8167 || || ||||| ||||| || ||||| ||| ||||| ||||||||||| |||||| || Sbjct 2436 GCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAA 2377 Query 8168 GAAAGTTCCCACTCACGACCCATGTA 8193 |||||||||||||| |||||| || Sbjct 2376 CTAAGTTCCCACTCACAACCCATATA 2351 >seq1984290 Length=1936 Score = 82.4 bits (90), Expect = 9e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 7528 CTCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCAT 7587 |||| ||||||| | ||| ||||||||||||||||||||||| |||||||| |||||||| Sbjct 1877 CTCAACAGCAGCCAAGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCAT 1936 >seq1972347 Length=213 Score = 82.4 bits (90), Expect = 9e-11 Identities = 83/107 (78%), Gaps = 1/107 (1%) Strand=Plus/Minus Query 6356 AATAGGATGTTCTTGGTATAGAACGTCTCGAACTCTGGATCCTCCGCTGCTCTGATCTCT 6415 || || || || ||||| ||||| |||||||| || ||||| |||||||| | ||| || Sbjct 211 AAAAGAATATTTTTGGTGTAGAAAGTCTCGAATTCAGGATCTTCCGCTGCACGGATTTCC 152 Query 6416 TGTGAAACAAAGTCATAAGCTCTAAGGTTAAGTG-CAAGACCAATAA 6461 || |||||||||||||| || | | ||| || | |||||| | ||| Sbjct 151 TGGGAAACAAAGTCATAGGCACGTAAGTTCAGAGCCAAGACAACTAA 105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605965878199440