Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_
202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters
Query= NC_015286.1
Length=175230
Score E
Sequences producing significant alignments: (Bits) Value
seq900588 661 0.0
seq94777 614 6e-171
seq174834 226 3e-54
seq219505 116 4e-21
seq747441 114 1e-20
seq20701 114 1e-20
seq263076 105 7e-18
seq1972347 100 3e-16
seq780762 100 3e-16
seq124049 100 3e-16
seq143040 93.3 5e-14
seq2075000 86.0 7e-12
seq188012 84.2 2e-11
seq1984290 82.4 8e-11
>seq900588
Length=4557
Score = 661 bits (732), Expect = 0.0
Identities = 739/994 (74%), Gaps = 2/994 (0%)
Strand=Plus/Plus
Query 167087 CTTTTGCGATTGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCT 167146
||| ||| | ||| | || |||||| | || ||||| || |||| |||||||| ||| |
Sbjct 2999 CTTCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTT 3058
Query 167147 GATGATCCCTACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTC 167205
|||||||||||| || | | |||| | ||||| || || ||||||||| ||| ||| |
Sbjct 3059 GATGATCCCTACCTTATTGACCGCAA-CTTCTGTATTTATTATCGCCTTCATCGCTGCCC 3117
Query 167206 CTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 167265
|||| || || || |||||||| ||||| || ||| ||||||| | | ||||| ||||
Sbjct 3118 CTCCAGTAGATATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACA 3177
Query 167266 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCA 167325
| || ||||||||||| || ||||| ||||| || || || | ||||| || || |
Sbjct 3178 ATATTATCTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 3237
Query 167326 TCTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAG 167385
| |||||||| ||| | | || |||||||| |||||||||||||||| | || | |
Sbjct 3238 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTG 3297
Query 167386 TTTTCCACTTCCTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACC 167445
|| | |||||| | |||| | | ||||||||||||||||||||||| || ||
Sbjct 3298 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCC 3357
Query 167446 GTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTG 167505
|||| ||||||||||| ||||| ||||||||| || ||||| || || || || |||
Sbjct 3358 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTG 3417
Query 167506 CTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTA 167565
|||| ||| | | || ||| | |||||||| || ||||| | |||||| | || |
Sbjct 3418 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTTTAGGAA 3477
Query 167566 TCTCTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACC 167625
|||||||||| ||||||| ||| |||| ||||| ||||||||||||||||| ||||| |
Sbjct 3478 TCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATC 3537
Query 167626 CCTTCCATATGCTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACG 167685
| ||||| ||| | || || ||||| |||||||||||||| || |||||||| ||||| |
Sbjct 3538 CATTCCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 3597
Query 167686 GTTCTCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATG 167745
|||| |||| |||||| || | | ||||| || |||| ||| || || | |
Sbjct 3598 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGG 3657
Query 167746 GTTACAAGTTCGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCG 167805
||||||| || ||||| || |||||||| ||||| || || |||||||||||||| || |
Sbjct 3658 GTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTG 3717
Query 167806 GTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGG 167865
| || | ||||||||||| || ||||||||||| || || | |||||||||||||
Sbjct 3718 GCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGG 3777
Query 167866 CAGCATGGCCTGTTGTTGGTATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCA 167925
| || |||||||| || || ||||||| ||||
Sbjct 3778 CTGCTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 3837
Query 167926 ACCTGAACGGTTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTGCCTA 167985
|||| || |||||||| |||||||| ||| | |||||||| ||| ||| | ||
Sbjct 3838 ACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATA 3897
Query 167986 CTTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATG 168045
||||||| || | ||||||||||| || ||||||||||| |||||||| |||||||
Sbjct 3898 CTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAACGTAATG 3957
Query 168046 CTCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 168079
|||||||||||||||| ||| | ||||||| |||
Sbjct 3958 CTCACAACTTCCCTCTAGACTTAGCTGCTGTTGA 3991
>seq94777
Length=2712
Score = 614 bits (680), Expect = 6e-171
Identities = 741/1003 (74%), Gaps = 4/1003 (0%)
Strand=Plus/Plus
Query 168495 GATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 168554
||||||||| | | |||| |||||||||||||| || |||||||| || | || |||
Sbjct 1078 GATGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCTGGCCTATTGCTCTTT 1137
Query 168555 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTGCTTTCGTCACGAGTTGG 168614
|| ||||||| | ||| | || |||||| |||| ||||| |||| || || ||||
Sbjct 1138 CCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACAACTTTTGTAACTTCTTGG 1197
Query 168615 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTTA-CTGCGGCAGT 168673
||||| || || ||||||||||||||| |||| || || ||||||| | || |||||
Sbjct 1198 TATACCCATGGATTGGCAAGTTCCTATTTGGAAGGTTGTAA-TTTCTTAACCGCAGCAGT 1256
Query 168674 TAGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCACA 168733
| ||| || || || | | | || ||| | |||| || ||||| || || |||||
Sbjct 1257 TTCTACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGGCCAGAAGCACA 1316
Query 168734 AGGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACGG 168793
||| ||||| | ||||||||| | || || || ||| ||||||| || ||||||||
Sbjct 1317 AGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTATGGACTTTTGTAGCTCTCCACGG 1376
Query 168794 GGCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGTA 168852
|||||| || ||||| ||||||||| | || || |||||||| || || ||| || |
Sbjct 1377 GGCTTTTGCACTAATAGGTTTCATGTTACGCCAATTTGAACTTGCTCGGTCTGTTCAAT- 1435
Query 168853 TCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTC 168912
| || || || ||||| || | ||||||||||| || |||||||||||| || || |
Sbjct 1436 TGCGGCCTTATAATGCAATCTCATTCTCTGGTCCAATTGCTGTTTTTGTTTCGGTATTCC 1495
Query 168913 TCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAA 168972
| || || || ||||| ||||| ||||||| || || || ||| || || |||| |
Sbjct 1496 TTATTTATCCACTGGGGCAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGA 1555
Query 168973 TCTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCATA 169032
| || |||||| | || ||| | |||||||| ||||| ||||| |||| ||||||||||
Sbjct 1556 TATTTCGATTCATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCATA 1615
Query 169033 TGATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACAG 169092
||||||| || || || | || || | || |||| | || |||||||| | || |
Sbjct 1616 TGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGAGCAACCG 1675
Query 169093 TAGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGACAGCA 169152
|||| || ||||| | | | || ||||| |||||||| ||| || ||| || |
Sbjct 1676 TAGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGTGCTTTTAACCCAA 1735
Query 169153 CTCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTTG 169212
|||| | || || || ||||||||||| ||||| ||||| || ||||| || |||||||
Sbjct 1736 CTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTG 1795
Query 169213 GTATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGG 169272
|| |||| || ||||| | ||||| |||||||||||||| ||||| || || | |
Sbjct 1796 GTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCACCG 1855
Query 169273 GTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACT 169332
|| | |||| ||| | || || | |||| | ||||| ||| | ||||| |||||||
Sbjct 1856 GTTTATGGATGAGTGCTATTGGCGTAGTTGGCTTGGCTCTGAACTTACGTGCCTATGACT 1915
Query 169333 TTGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAGA 169392
|||||||||| || ||| | ||||| |||||||| || || ||||| ||||||||||| |
Sbjct 1916 TTGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTCGAGACTTTCTACACCAAAA 1975
Query 169393 ACATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGAGA 169452
| || || || ||||| ||| ||||||| ||| | ||| || ||||| |||||||| |
Sbjct 1976 ATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAA 2035
Query 169453 ACTTTGTGTTCCCTGAGGAAGTACTTCCCCGAGGTAATGCCCT 169495
| || | ||||||||||| || || || || || || || ||
Sbjct 2036 ATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 2078
>seq174834
Length=1002
Score = 226 bits (250), Expect = 3e-54
Identities = 388/551 (70%), Gaps = 13/551 (2%)
Strand=Plus/Minus
Query 168495 GATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 168554
||||||||| | | ||| |||||| ||||||| || |||| ||| || | || |||
Sbjct 623 GATGACTGGTTACGAAGGGGCCGTTTCATTTTTGTAGGATGGTATGGCCTATTGCTCTTT 564
Query 168555 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTT--ACTGGGACTGCTTTCGTCACGAGTT 168612
|| ||||||| | || | || |||||| || || || || ||| || || ||
Sbjct 563 CCTTATGCTTATTTCTCTTTAGG-GGTTGGTTTTTACAGGAACAACTTATGTAACTTCTT 505
Query 168613 GGTATACTCACGGGTTGGCAAGTTCCTATCTG-GAGGGCGCAAACTTTCTTA-CTGCGGC 168670
||||||||| || |||||||||||||| || |||| | || ||||||| | ||| |
Sbjct 504 TGTATACTCATGGACTGGCAAGTTCCTATTTGCGAGGTTGTAA--TTTCTTAACAGCGAC 447
Query 168671 AGTTAGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGC 168730
| || ||| || || | | | || ||| | |||| || ||||| || || ||
Sbjct 446 AATTTCTACCTTTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGGCCAGAAGC 387
Query 168731 ACAAGGGGATTTC-GTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCC 168789
||| | ||||| ||| | ||||||||| | || || || ||| ||||||| || ||||
Sbjct 386 ACATGTAGATTTTAGTC-GTTGGTGTCAATTAGGCGGTCTATGGACTTTTGTAGCACTCC 328
Query 168790 ACGGGGCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATC 168848
||||| |||| || ||||| || |||||| | | || |||||| || || ||| ||
Sbjct 327 ACGGG-CTTTTGCACTAATAGGGTTCATGTTACACCAACTTGAACGTGCTCGGTCTGTTC 269
Query 168849 GGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTC 168908
| | || ||||| || | |||||||||| || ||| |||||||| ||
Sbjct 268 AAT-TGNNNNNTTATAATGCAATCTCATTCTCTGGTCTAATTGCTATTTTTGTTTCTGTA 210
Query 168909 TTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCA 168968
||||| | || || || || |||| ||||||| || || || ||| || || ||
Sbjct 209 TTTCTTAGTTATCCACTCGG-CAATATGGTTGGTTCTTTGCACCGAGTTTTGGTGTAGCA 151
Query 168969 GCAATCTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTT 169028
||||| || |||||| | || ||| | |||||||| ||||| ||||| |||||| ||||
Sbjct 150 GCAATATTTCGATTCATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAATCTATTT 91
Query 169029 CATATGATGGG 169039
|||||||||||
Sbjct 90 CATATGATGGG 80
>seq219505
Length=1904
Score = 116 bits (128), Expect = 4e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 169278 TGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTT 169337
|||| ||| | || || | ||||| | || || ||| | |||| ||||||||||||
Sbjct 1899 TGGATGAGTGCTATTGGCGTAATTGGCTTGGCACTGAACTTATGTGCCTATGACTTTGTT 1840
Query 169338 TCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAGAACATC 169397
||| | || ||| | ||||| |||||||| || | |||||| || |||| || || ||
Sbjct 1839 TCCTAGGAAATCTGTGCAGCGGAAGATCCTGAATATGAGACTTTTGACACAAAAAATATT 1780
Query 169398 CTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGAGAACTTT 169457
|| || ||||| ||| |||||| ||| | | | | |||||||||||||| || ||
Sbjct 1779 CTTTTAAACGAGGGTATTCGTGTGTGGATGGAAGCCGAGGATCAACCTCATGAAAATCTT 1720
Query 169458 GTGTTCCCTGAGGAAGTACTTCCCCGAGGTAA 169489
| ||||||||||| | || || || || ||
Sbjct 1719 ATATTCCCTGAGGAGGCTCTGCCACGTGGAAA 1688
>seq747441
Length=209
Score = 114 bits (126), Expect = 1e-20
Identities = 151/207 (73%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 168787 TCCACGGGGCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCAC-GTCTC 168845
||||||||||||| || ||||| ||||||||| | || || |||||||| || | ||||
Sbjct 1 TCCACGGGGCTTTTGCACTAATAGGTTTCATGTTACGCCAATTTGAACTTGCTCGGTCTG 60
Query 168846 ATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGC 168905
|| | | || || || ||||| || | |||||| |||| || ||||||||||
Sbjct 61 TTCAAT-TGCGGCCTTATAATGCAATCTCATTCTCTCGTCCAATTTTTGTTTTTGTTTCG 119
Query 168906 GTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTC 168965
|| || || || || || ||||| ||||| ||||||| || || || ||| || ||
Sbjct 120 GTATTCCTTATTTATCCACTGGGGCAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCGTA 179
Query 168966 TCAGCAATCTTCCGATTCCTTCTCTTC 168992
|||| || || |||||| | || |||
Sbjct 180 GCAGCGATATTTCGATTCATCCTTTTC 206
>seq20701
Length=725
Score = 114 bits (126), Expect = 1e-20
Identities = 200/287 (70%), Gaps = 3/287 (1%)
Strand=Plus/Minus
Query 169194 TTCTGGTCTCAGATCTTTGGTATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATG 169253
|| ||||| || ||||||| | || || ||||| | ||||| |||||||||||
Sbjct 723 TTTTGGTCCCAAATCTTTGATGTTTTTTTTCC-AATAAACGTTGGTTACATTTCTTTATC 665
Query 169254 CTGTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTC 169313
|| ||| || |||| || ||| | || | ||| || || || |||| | |||||
Sbjct 664 CTATTT-TTACTGTCATCGGTTTATGTATGAGTGATATTGGCATAGTTGGCTTGGCTCTA 606
Query 169314 AACCTTCGTGCTTATGACTTTGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTT 169373
||| | ||||| ||||||||||||||| | || || | ||||| ||||||| || |||
Sbjct 605 AACTTACGTGCCTATGACTTTGTTTCCTAGGAAATGTGTGCAGCGGAAGATCGTGAATTT 546
Query 169374 GAGACGTTCTACACCAAGAACATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCT 169433
||| | ||||||||||| || || || || || | | ||| ||| ||| | | | |
Sbjct 545 GAGGCTTTCTACACCAAAAATATTACTTTAAATGAGGTTATTCATGCGTGGATGGAAGAT 486
Query 169434 ATTGATCAACCTCATGAGAACTTTGTGTTCCCTGAGGAAGTACTTCC 169480
||||| | | |||| | || | ||||| ||||| || || ||
Sbjct 485 CGGGATCAGCGTAATGAAATTATTATATTCCC-GAGGAGGTTCTACC 440
>seq263076
Length=554
Score = 105 bits (116), Expect = 7e-18
Identities = 206/305 (68%), Gaps = 4/305 (1%)
Strand=Plus/Minus
Query 169194 TTCTGGTCTCAGATCTTTGGTATTGCGTTCAGT-AATAAGAGGTGGTTGCATTTCTTTAT 169252
|| ||||| || ||||||||| || || ||||| ||||| ||||| |||||
Sbjct 553 TTTTGGTCCCAAATCTTTGGTGATGATTTTTTCCAATAAACCTTGGTTACATTTATTTAT 494
Query 169253 GCTGTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTG-CTC 169311
||| ||||| ||| | || | |||| | || || || || ||| ||||| |||
Sbjct 493 GCTATTTGTAATTGTCACTAGTTTATGGATGACTTATATTGGCATAGTTG-TCTTGGCTC 435
Query 169312 TCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGT 169371
| ||| | ||||| |||| ||| | ||| | |||||||| || |
Sbjct 434 TGAACTTACGTGCCTATGNNNNNNNNNNNNNNNNNATCCGTGCAACGGAAGATCCTGAAT 375
Query 169372 TTGAGACGTTCTACACCAAGAAC-ATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCA 169430
||||||| |||||| |||| || || ||||| || || ||||||| | | | |||
Sbjct 374 TTGAGACTTTCTACTCCAAAAAATATTTATTTGAATGAGAGTATTCGTGCGTAGATGGCA 315
Query 169431 CCTATTGATCAACCTCATGAGAACTTTGTGTTCCCTGAGGAAGTACTTCCCCGAGGTAAT 169490
||| ||||| |||||||| || || | ||||||||||| || || || || || |||
Sbjct 314 CCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAAT 255
Query 169491 GCCCT 169495
|| ||
Sbjct 254 GCTCT 250
>seq1972347
Length=213
Score = 100 bits (110), Expect = 3e-16
Identities = 87/107 (81%), Gaps = 1/107 (1%)
Strand=Plus/Plus
Query 169297 TTATTGGTCTTG-CTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAGATCAGAGCA 169355
||| | |||||| |||| ||| | ||||| ||||||||||||||||| || ||| | |||
Sbjct 105 TTAGTTGTCTTGGCTCTGAACTTACGTGCCTATGACTTTGTTTCCCAGGAAATCCGTGCA 164
Query 169356 GCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAGAACATCCTCTT 169402
|| |||||||| || || ||||| ||||||||||| || || || ||
Sbjct 165 GCGGAAGATCCTGAATTCGAGACTTTCTACACCAAAAATATTCTTTT 211
>seq780762
Length=275
Score = 100 bits (110), Expect = 3e-16
Identities = 78/93 (84%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 167987 TTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGC 168046
|||||| || | ||||||||||| || ||||||||||| |||||||| ||||||||
Sbjct 275 TTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAACGTAATGC 216
Query 168047 TCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 168079
||||||||||||||| ||| | ||||||| |||
Sbjct 215 TCACAACTTCCCTCTAGACTTAGCTGCTGTTGA 183
>seq124049
Length=9620
Score = 100 bits (110), Expect = 3e-16
Identities = 238/351 (68%), Gaps = 13/351 (4%)
Strand=Plus/Plus
Query 168793 GGGCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGT 168851
||||||| | ||||| ||||||||| || |||||||| || || ||| || |
Sbjct 9253 GGGCTTTTACACTAATAGGTTTCATGNNNNNNCAATTTGAACTTGCTCGGTCTGTTCAAT 9312
Query 168852 ATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTT 168911
| | || || ||||| || | ||||||||||| || | | ||||| | || ||
Sbjct 9313 -TGCAACCTTATAATGCAATCTCATTCTCTGGTCCAATTGTTACTTTTGCTTCTGTATTC 9371
Query 168912 CTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCA 168971
|| || | || ||||| ||||| ||| ||| || || | ||| || | || ||
Sbjct 9372 CTTATTTGTCCACTGGGGCAATCTGGTTAGTTCTTTGCGCTGAGTTTTGG---CGCAACA 9428
Query 168972 ATCTTCC---GATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTT 169028
|| | | ||||| | || ||| | |||||||| ||||| ||| || | ||||||
Sbjct 9429 ATGATACTTTGATTCATCCTTTTCTTCCAAGGATTTCATAA-TGGGAGTTGTACCCATTT 9487
Query 169029 CATATGATGGGTGTAGCAGGTAT-TTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGT 169087
||||||||||| | || || | || || | ||| ||| || | || |||||||| |
Sbjct 9488 CATATGATGGGATTTGCCGGAGTATTAGGCATGAGTCTT-CTATGCGCTATTCATGGAGC 9546
Query 169088 TACAGTAGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATA-CTTTCA 169137
|| |||| || ||||| | | | |||| ||| ||||||| ||||||
Sbjct 9547 AAC-CTAGAAAACACTCTATTTTAGGATGATGATGGTGCAAATACCTTTCA 9596
>seq143040
Length=3997
Score = 93.3 bits (102), Expect = 5e-14
Identities = 128/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 168906 GTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTC 168965
|| || || || || || ||||| ||||| ||||||| || || | ||| || ||
Sbjct 3865 GTATTCCTTATTTATCCACTGGGGCAATCTGGTTGGTTCTTTGCACTGAGTTTTGGCGTA 3806
Query 168966 TCAGCAATCTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCA 169025
| || || || ||||| | || ||| | |||||||| ||||| ||||| |||| |||
Sbjct 3805 ACGGCGATATTTTGATTCATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCA 3746
Query 169026 TTTCATATGATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGG 169084
|||||||||||||| || || || || || || | || |||| || ||||||||
Sbjct 3745 TTTCATATGATGGGAGTTGCCGGAATATTAGGCGCGGCTCTGCTACGCGCTATTCATGG 3687
>seq2075000
Length=209
Score = 86.0 bits (94), Expect = 7e-12
Identities = 146/209 (70%), Gaps = 2/209 (1%)
Strand=Plus/Minus
Query 168796 CTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGTATC 168854
|||| || ||||| ||||||||| | || || |||||||| || || ||| || | |
Sbjct 209 CTTTTGCACTAATAGGTTTCATGTTACGCCAATTTGAACTTGCTCGGTCTGTTCAAT-TG 151
Query 168855 CGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTC 168914
|| || || ||||| || | ||||||||||| || |||||| || | || ||
Sbjct 150 CGGCCTTATAATGCAATCTCATTCTCTGGTCCAATTTTTGTTTTCATTTCTTTATTCCTT 91
Query 168915 ATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATC 168974
| || || || || ||||| |||||||| || || || ||| || |||| ||
Sbjct 90 AGTTATCCACTAGGGCAATCTAGTTGGTTCTTTGCGCCGAGTTTTCATGTAGCAGCGATA 31
Query 168975 TTCCGATTCCTTCTCTTCCTACAAGGATT 169003
|| ||||| |||| ||| | ||||||||
Sbjct 30 TTTTGATTCATTCTTTTCTTCCAAGGATT 2
>seq188012
Length=2438
Score = 84.2 bits (92), Expect = 2e-11
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 167415 TATATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCCTGGATCTGTGTT 167474
||||||||| ||||||||||||| || |||||| ||||||||||| ||||| ||||
Sbjct 2351 TATATGGGTTGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTT 2410
Query 167475 GCATACTCTGCTCCAGTCGCTGCAGC 167500
||||| || ||||| || || || ||
Sbjct 2411 GCATATTCAGCTCCTGTTGCAGCTGC 2436
>seq1984290
Length=1936
Score = 82.4 bits (90), Expect = 8e-11
Identities = 54/60 (90%), Gaps = 0/60 (0%)
Strand=Plus/Minus
Query 168021 ATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTTGCTGCTGCTGAG 168080
|||||||| |||||||| ||||||||||||||||||||||| ||| | ||||||| ||||
Sbjct 1936 ATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACTTGGCTGCTGTTGAG 1877
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546046900952400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |