Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq900588 690 0.0 seq94777 603 1e-167 seq174834 206 3e-48 seq20701 140 4e-28 seq219505 122 1e-22 seq272447 96.9 4e-15 seq143040 96.9 4e-15 seq124049 96.9 4e-15 seq1972347 91.5 2e-13 seq542521 91.5 2e-13 seq1383633 86.0 7e-12 seq780762 84.2 2e-11 seq182068 84.2 2e-11 >seq900588 Length=4557 Score = 690 bits (764), Expect = 0.0 Identities = 748/989 (76%), Gaps = 2/989 (0%) Strand=Plus/Plus Query 164764 TTTTGCGAGTGGGTGACTTCCACCAATAACCGTCTTTATGTCGGTTGGTTCGGTGTTCTT 164823 || ||| | ||| | ||| ||| | || |||||||| |||| |||||||||||| | Sbjct 3000 TTCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTG 3059 Query 164824 ATGATCCCCTGTTTGCTCGCCGCTACAATTTGT-TTTATTACTGCATTCATCGCTGCTCC 164882 |||||||| || | |||| || | ||| ||||||| || ||||||||||| || Sbjct 3060 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 3118 Query 164883 CCCTGTGGACATTGATGGTATTCGTGAACCTGTCGCAGGTTCTCTAATGTACGGTAACAA 164942 || || || |||||||||||||| || ||||| | |||||| || | || || ||||| Sbjct 3119 TCCAGTAGATATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAA 3178 Query 164943 CATCATCTCTGGTGCTGTCGTTCCGTCTTCTAACGCAATCGGACTTCACTTCTATCCTAT 165002 || |||||||||||| | |||| ||||| || |||||| | ||||| || || || Sbjct 3179 TATTATCTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 3238 Query 165003 TTGGGAAGCTGCAACCATGGATGAATGGTTGTACAACGGTGGTCCTTACCAGTTGGTTGT 165062 ||||||||||||| | | ||||| ||||| ||||| ||||||||||| || | |||| Sbjct 3239 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 3298 Query 165063 CTTCCACTTCCTCATCGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTGTCTTACCG 165122 | |||||| | | ||||||||||| || |||||||||||||||||||| || ||| Sbjct 3299 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 3358 Query 165123 CCTCGGTATGCGTCCTTGGATTTGCGTAGCATATAGCGCACCTGTCGCTGCTGCTGCCGC 165182 || |||||||||||||||||| || |||||| || ||||| || |||||| | || Sbjct 3359 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 3418 Query 165183 AGTTTTCCTGGTCTATCCTTTCGGTCAAGGGAGTTTCTCTGATGGTATGCCTCTTGGTAT 165242 |||||| || | || ||| | |||||||| || || ||||||||||||||| | || || Sbjct 3419 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTTTAGGAAT 3478 Query 165243 CTCTGGTACTTTTAACTATATGTTCGTCTTCCAAGCAGAACATAACATTCTTATGCATCC 165302 |||||||||||| |||| |||| | || ||||| ||||| || ||||| ||||||||||| Sbjct 3479 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCC 3538 Query 165303 GTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGG 165362 ||||||||| | || || ||||| |||||||| || || || ||| |||||||||||| Sbjct 3539 ATTCCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 3598 Query 165363 AAGTCTTGTTACTTCCTCACTCGTCCGCGAGACAACTGAAACAGAGAGTCAGAACTACGG 165422 | || || || | || | || || ||||||| || | || | || Sbjct 3599 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGG 3658 Query 165423 TTATAAGTTTGGACAAGAAGAAGAGACCTATAACATCGTCGCTGCCCACGGGTACTTCGG 165482 ||| || ||||| ||||| |||||||| ||||| || || ||||| || || || || || Sbjct 3659 TTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGG 3718 Query 165483 TCGTCTCATTTTCCAATACGCATCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGC 165542 || | || |||||||| || |||||||| || ||||| | ||||||||| | || Sbjct 3719 CCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGC 3778 Query 165543 AGCATGGCCTGTAGTTGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAA 165602 || ||||||||||| || ||||||||||||||| | ||| |||| || ||||| ||||| Sbjct 3779 TGCTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAA 3838 Query 165603 CCTGAACGGTTTCAACTTCAACCAGTCTATTGTTGATAGTCAGAACAAAATCATCCCTAC 165662 ||| || |||||||| |||||||| ||| | ||||||||||| | || ||| Sbjct 3839 CCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATAC 3898 Query 165663 TTGGGCTGACGTTCTGAACCGTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGC 165722 ||||||||| | | ||||||||| || ||||||||||| ||||| || ||||| || Sbjct 3899 TTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAACGTAATGC 3958 Query 165723 TCACAACTTCCCCCTCGACCTCGCTGCTG 165751 |||||||||||| || ||| | ||||||| Sbjct 3959 TCACAACTTCCCTCTAGACTTAGCTGCTG 3987 >seq94777 Length=2712 Score = 603 bits (668), Expect = 1e-167 Identities = 741/1007 (74%), Gaps = 4/1007 (0%) Strand=Plus/Plus Query 166173 GACGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTCTT 166232 || |||||| | | | || |||||||||||||| || |||||||| || | || || Sbjct 1078 GATGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCTGGCCTATTGCTCTTT 1137 Query 166233 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTCACTGGGACTACTTTCGTCACGAGTTGG 166292 || ||||||| | ||| | || |||||| | || ||||| ||||| || || |||| Sbjct 1138 CCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACAACTTTTGTAACTTCTTGG 1197 Query 166293 TATACTCATGGACTCGCAAGCAGTTATCTGGAGGGTGCAAACTTTCTTA-CTGCGGCAGT 166351 ||||| |||||| | ||||| ||| |||| ||| || ||||||| | || ||||| Sbjct 1198 TATACCCATGGATTGGCAAGTTCCTATTTGGAAGGTTGTAA-TTTCTTAACCGCAGCAGT 1256 Query 166352 TTCTACTCCAGCAGATGCTATGGGTCATTCTCTACTTCTTCTCTGGGGTCCTGAGGCTCA 166411 |||||| || || || | | | || ||| | | || || ||||| || || || || Sbjct 1257 TTCTACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGGCCAGAAGCACA 1316 Query 166412 AGGGGATTTCGTCAGGTGGTGCCAACTTGGAGGGCTTTGGGCCTTTGTTGCTCTCCACGG 166471 ||| ||||| | ||||| ||| | || || || ||| | ||||| ||||||||||| Sbjct 1317 AGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTATGGACTTTTGTAGCTCTCCACGG 1376 Query 166472 TGCTTTTGCCCTAATTGGTTTCATGCTTCGGCAGTTTGAAATCGCTCG-TCTAGTAGGTA 166530 |||||||| ||||| ||||||||| | || || |||||| | ||||| ||| | | Sbjct 1377 GGCTTTTGCACTAATAGGTTTCATGTTACGCCAATTTGAACTTGCTCGGTCTGTTCAAT- 1435 Query 166531 TTCGTCCGTACAATGCAATCGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTC 166590 | || || || ||||||||| | || |||||||| |||||||| || ||| || || | Sbjct 1436 TGCGGCCTTATAATGCAATCTCATTCTCTGGTCCAATTGCTGTTTTTGTTTCGGTATTCC 1495 Query 166591 TCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAA 166650 | || || || ||||| ||||| ||||||| || || || ||| || || |||| | Sbjct 1496 TTATTTATCCACTGGGGCAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGA 1555 Query 166651 TCTTCCGATTCCTCCTTTTCCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCATA 166710 | || |||||| |||||||| | |||||||| || || ||||| ||||||||||||||| Sbjct 1556 TATTTCGATTCATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCATA 1615 Query 166711 TGATGGGTGTAGCAGGTATTCTCGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAG 166770 ||||||| || || || | | || | || |||| | || || ||||| | || | Sbjct 1616 TGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGAGCAACCG 1675 Query 166771 TAGAGAACACTCTGTATCAAGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTCTA 166830 |||| |||||||| | | | || ||||| |||||||| ||| || || || | | Sbjct 1676 TAGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGTGCTTTTAACCCAA 1735 Query 166831 CTCAAGAGGAAGAAACCTATTCAATGGTTACAGCAAACCGCTATTGGTCTCAGATCTTCG 166890 |||||| |||||||| ||||||||||| || || ||||||| |||||| || ||||| | Sbjct 1736 CTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTG 1795 Query 166891 GTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGG 166950 || |||| ||| ||||| | ||||| |||||||||||||| ||||| || || | | Sbjct 1796 GTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCACCG 1855 Query 166951 GTCTGTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACT 167010 || | |||| ||| | || || | |||| | ||||| ||| | ||||| ||||||| Sbjct 1856 GTTTATGGATGAGTGCTATTGGCGTAGTTGGCTTGGCTCTGAACTTACGTGCCTATGACT 1915 Query 167011 TTGTTTCCCAAGAACTAAGGGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAGA 167070 |||||||||| ||| | | ||||| || |||||||| || || || ||||| ||||| | Sbjct 1916 TTGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTCGAGACTTTCTACACCAAAA 1975 Query 167071 ACATTCTCTTGAATGAGGGTATGCGTTCTTGGATGGCAACTATCGATCAACCTCATGAGA 167130 | ||||| || || |||||||| ||| | ||||||||| || ||||| |||||||| | Sbjct 1976 ATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAA 2035 Query 167131 GTTTCGTATTCCCTGAAGAGGTTCTTCCTAGAGGTAACGCTCTCTAA 167177 | | |||||||||| |||||||| || | || |||||||| ||| Sbjct 2036 ATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAA 2082 >seq174834 Length=1002 Score = 206 bits (228), Expect = 3e-48 Identities = 371/530 (70%), Gaps = 13/530 (2%) Strand=Plus/Minus Query 166194 CGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTCTTCCCACTGCTTATCTTGCTATT 166253 |||||| ||||||| || |||| ||| || | || |||| ||||||| | || | Sbjct 602 CGTTTCATTTTTGTAGGATGGTATGGCCTATTGCTCTTTCCTTATGCTTATTTCTCTTTA 543 Query 166254 GGCGGTTGGCTC--ACTGGGACTACTTTCGTCACGAGTTGGTATACTCATGGACTCGCAA 166311 || |||||| | || || || |||| || || || ||||||||||||||| |||| Sbjct 542 GG-GGTTGGTTTTTACAGGAACAACTTATGTAACTTCTTTGTATACTCATGGACTGGCAA 484 Query 166312 GCAGTTATCTG-GAGGGTGCAAACTTTCTTA-CTGCGGCAGTTTCTACTCCAGCAGATGC 166369 | ||| || |||| || || ||||||| | ||| || ||||||| || || Sbjct 483 GTTCCTATTTGCGAGGTTGTAA--TTTCTTAACAGCGACAATTTCTACCTTTGCCAATAG 426 Query 166370 TATGGGTCATTCTCTACTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTC-GTCAGGT 166428 | | | || ||| | | || || ||||| || || || || | ||||| ||| | | Sbjct 425 TTTAGCACACTCTTTGTTGCTACTATGGGGGCCAGAAGCACATGTAGATTTTAGTC-GTT 367 Query 166429 GGTGCCAACTTGGAGGGCTTTGGGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTG 166488 |||| ||| | || || || ||| | ||||| || |||||||| |||||||| ||||| | Sbjct 366 GGTGTCAATTAGGCGGTCTATGGACTTTTGTAGCACTCCACGG-GCTTTTGCACTAATAG 308 Query 166489 GTTTCATGCTTCGGCAGTTTGAAATCGCTCG-TCTAGTAGGTATTCGTCCGTACAATGCA 166547 | |||||| | | || ||||| ||||| ||| | | | || |||||| Sbjct 307 GGTTCATGTTACACCAACTTGAACGTGCTCGGTCTGTTCAAT-TGNNNNNTTATAATGCA 249 Query 166548 ATCGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGT 166607 ||| | || ||||||| |||||| | || ||| ||| ||||| | || || || || Sbjct 248 ATCTCATTCTCTGGTCTAATTGCTATTTTTGTTTCTGTATTTCTTAGTTATCCACTCGG- 190 Query 166608 CAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCTT 166667 |||| ||||||| || || || ||| || || ||||||| || |||||| ||||| Sbjct 189 CAATATGGTTGGTTCTTTGCACCGAGTTTTGGTGTAGCAGCAATATTTCGATTCATCCTT 130 Query 166668 TTCCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCATATGATGGG 166717 ||| | |||||||| || || ||||| |||| | ||||||||||||||| Sbjct 129 TTCTTCCAAGGATTTCATAATTGGACGTTGAATCTATTTCATATGATGGG 80 >seq20701 Length=725 Score = 140 bits (154), Expect = 4e-28 Identities = 218/308 (71%), Gaps = 3/308 (1%) Strand=Plus/Minus Query 166870 GCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTA 166929 ||| |||||| || ||||| | | || ||| ||||| | ||||| |||||||||| Sbjct 725 GCTTTTGGTCCCAAATCTTTGATGTTTTTTTTCC-AATAAACGTTGGTTACATTTCTTTA 667 Query 166930 TGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCATCGGTATTATTGGTCTTGCTC 166989 | || ||| || |||| || ||| | || | ||| || || || |||| | |||| Sbjct 666 TCCTATTT-TTACTGTCATCGGTTTATGTATGAGTGATATTGGCATAGTTGGCTTGGCTC 608 Query 166990 TCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAAGGGCAGCAGAGGATCCTGAGT 167049 | ||| | ||||| ||||||||||||||| | ||| | | ||||| || |||| ||| | Sbjct 607 TAAACTTACGTGCCTATGACTTTGTTTCCTAGGAAATGTGTGCAGCGGAAGATCGTGAAT 548 Query 167050 TTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGGGTATGCGTTCTTGGATGGCAA 167109 |||| | ||||| ||||| || ||| || ||||||| ||| | | | ||||||| | Sbjct 547 TTGAGGCTTTCTACACCAAAAATATTACTTTAAATGAGGTTATTCATGCGTGGATGGAAG 488 Query 167110 CTATCGATCAACCTCATGAGAGTTTCGTATTCCCTGAAGAGGTTCTTCCTAGAGGTAACG 167169 | ||||| | | |||| | | | ||||||| || |||||||| || || ||| Sbjct 487 ATCGGGATCAGCGTAATGAAATTATTATATTCCC-GAGGAGGTTCTACCACATGGAAACA 429 Query 167170 CTCTCTAA 167177 |||| ||| Sbjct 428 CTCTTTAA 421 >seq219505 Length=1904 Score = 122 bits (134), Expect = 1e-22 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 166956 TGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTT 167015 |||| ||| | || || | ||||| | || || ||| | |||| |||||||||||| Sbjct 1899 TGGATGAGTGCTATTGGCGTAATTGGCTTGGCACTGAACTTATGTGCCTATGACTTTGTT 1840 Query 167016 TCCCAAGAACTAAGGGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAGAACATT 167075 ||| | ||| | | ||||| || |||||||| | ||| || || | || || || ||| Sbjct 1839 TCCTAGGAAATCTGTGCAGCGGAAGATCCTGAATATGAGACTTTTGACACAAAAAATATT 1780 Query 167076 CTCTTGAATGAGGGTATGCGTTCTTGGATGGCAACTATCGATCAACCTCATGAGAGTTTC 167135 || || || |||||||| ||| ||||||| | | |||||||||||||| | | | Sbjct 1779 CTTTTAAACGAGGGTATTCGTGTGTGGATGGAAGCCGAGGATCAACCTCATGAAAATCTT 1720 Query 167136 GTATTCCCTGAAGAGGTTCTTCCTAGAGGTAACGCTCTCTAA 167177 |||||||||| |||| ||| || | || ||| |||| ||| Sbjct 1719 ATATTCCCTGAGGAGGCTCTGCCACGTGGAAACACTCTTTAA 1678 >seq272447 Length=1912 Score = 96.9 bits (106), Expect = 4e-15 Identities = 212/318 (67%), Gaps = 0/318 (0%) Strand=Plus/Plus Query 166769 AGTAGAGAACACTCTGTATCAAGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTC 166828 |||||| |||||| | | | | || | ||| |||||||| ||| || || | | Sbjct 722 AGTAGAAAACACTATATTTTAGGACGATGATGGTGCAAATACCTTCCGCGCTTTTAAACC 781 Query 166829 TACTCAAGAGGAAGAAACCTATTCAATGGTTACAGCAAACCGCTATTGGTCTCAGATCTT 166888 ||||||| |||||||| ||||| || | || || ||||| |||||||| || ||| | Sbjct 782 AACTCAAGTTGAAGAAACTTATTCGGTGATCACTGCTAACCGTTATTGGTCCCAAATCAT 841 Query 166889 CGGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTAT 166948 ||| |||| ||| ||||| | ||||| ||||||||||| | || | || | | Sbjct 842 TGGTGTTGCTTTTTCCAATAAACGCTGGTTATATTTCTTTATGATATTCTTACCCTTCAA 901 Query 166949 GGGTCTGTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGA 167008 | | | || | ||| || | | |||| | ||||| ||| | | || |||| Sbjct 902 TGATTTATGAATGAGTGTTATTGACGTAGTTGGCTTGGCTCTGAACTTACATGTCCATGA 961 Query 167009 CTTTGTTTCCCAAGAACTAAGGGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAA 167068 |||| ||||| | ||| | |||| || | |||||| || | | ||||| | ||| Sbjct 962 CTTTATTTCCAAGGAAATTTAGGCAACAAAAGATCCTACATTCAAGATTTTCTACATCAA 1021 Query 167069 GAACATTCTCTTGAATGA 167086 || ||| | || ||||| Sbjct 1022 AAATATTATTTTAAATGA 1039 >seq143040 Length=3997 Score = 96.9 bits (106), Expect = 4e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 166584 GTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTC 166643 || || || || || || ||||| ||||| ||||||| || || | ||| || || Sbjct 3865 GTATTCCTTATTTATCCACTGGGGCAATCTGGTTGGTTCTTTGCACTGAGTTTTGGCGTA 3806 Query 166644 TCAGCAATCTTCCGATTCCTCCTTTTCCTTCAAGGATTCCACAACTGGACACTGAACCCA 166703 | || || || ||||| |||||||| | |||||||| || || ||||| |||||||| Sbjct 3805 ACGGCGATATTTTGATTCATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCA 3746 Query 166704 TTTCATATGATGGGTGTAGCAGGTAT 166729 |||||||||||||| || || || || Sbjct 3745 TTTCATATGATGGGAGTTGCCGGAAT 3720 >seq124049 Length=9620 Score = 96.9 bits (106), Expect = 4e-15 Identities = 247/369 (67%), Gaps = 12/369 (3%) Strand=Plus/Plus Query 166473 GCTTTTGCCCTAATTGGTTTCATGCTTCGGCAGTTTGAAATCGCTCG-TCTAGTAGGTAT 166531 |||||| | ||||| ||||||||| || |||||| | ||||| ||| | | | Sbjct 9255 GCTTTTACACTAATAGGTTTCATGNNNNNNCAATTTGAACTTGCTCGGTCTGTTCAAT-T 9313 Query 166532 TCGTCCGTACAATGCAATCGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCT 166591 | || || ||||||||| | || |||||||| |||| | || | | ||| || || Sbjct 9314 GCAACCTTATAATGCAATCTCATTCTCTGGTCCAATTGTTACTTTTGCTTCTGTATTCCT 9373 Query 166592 CATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAAT 166651 || | || ||||| ||||| ||| ||| || || | ||| || | || |||| Sbjct 9374 TATTTGTCCACTGGGGCAATCTGGTTAGTTCTTTGCGCTGAGTTTTGGCG---CAACAAT 9430 Query 166652 CTTCC---GATTCCTCCTTTTCCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCA 166708 | | ||||| |||||||| | |||||||| || || ||| || |||||||||| Sbjct 9431 GATACTTTGATTCATCCTTTTCTTCCAAGGATTTCATAATGGGAGT-TGTACCCATTTCA 9489 Query 166709 TATGATGGGTGTAGCAGGTATTCTCGGTGGTGCAT-TGCTTTCTGCCATCCATGGTGTTA 166767 ||||||||| | || || | | | | || | | || | || || ||||| | | Sbjct 9490 TATGATGGGATTTGCCGG-AGTATTAGGCATGAGTCTTCTATGCGCTATTCATGGAGCAA 9548 Query 166768 CAGTAGAGAACACTCTGTATCAAGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACT 166827 | |||| |||||||| | | | |||| ||| |||||||| || | || || || Sbjct 9549 C-CTAGAAAACACTCTATTTTAGGATGATGATGGTGCAAATACCTTTCATGCTTTTAACC 9607 Query 166828 CTACTCAAG 166836 | ||||||| Sbjct 9608 CAACTCAAG 9616 >seq1972347 Length=213 Score = 91.5 bits (100), Expect = 2e-13 Identities = 85/107 (79%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 166975 TTATTGGTCTTG-CTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAAGGGCA 167033 ||| | |||||| |||| ||| | ||||| ||||||||||||||||| ||| | | ||| Sbjct 105 TTAGTTGTCTTGGCTCTGAACTTACGTGCCTATGACTTTGTTTCCCAGGAAATCCGTGCA 164 Query 167034 GCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAGAACATTCTCTT 167080 || || |||||||| || || || ||||| ||||| || ||||| || Sbjct 165 GCGGAAGATCCTGAATTCGAGACTTTCTACACCAAAAATATTCTTTT 211 >seq542521 Length=235 Score = 91.5 bits (100), Expect = 2e-13 Identities = 155/221 (70%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 166202 TTTTGTTGGTTGGTCTGGACTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTG 166261 |||||| || |||||||| || | || |||| ||||||| | ||| | || ||||| Sbjct 1 TTTTGTAGGATGGTCTGGCCTATTGCTCTTTCCTTGTGCTTATTTCGCTTTAGGGGGTTG 60 Query 166262 GCTCACTGGGACTACTTTCGTCACGAGTTGGTATACTCATGGACTCGCAAGCAGTTATCT 166321 | | || ||||| ||||| || || ||||||||| |||||| | | ||| ||| | Sbjct 61 GTTTACAGGGACAACTTTTGTAACTTCTTGGTATACCCATGGATTGGAAAGTTCATATTT 120 Query 166322 GGAGGG-TGCAAACTTTCTTA-CTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCAT 166379 ||| | || || ||||||| | | ||||||||||| || || || | | | || Sbjct 121 GGAATGATGTAA--TTTCTTAACCACAGCAGTTTCTACCCCTGCCAATAGTTTAGCACAC 178 Query 166380 TCTCTACTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTT 166420 ||| | | || || ||||| || || || |||||||||| Sbjct 179 TCTTTGTTGCTACTATGGGGGCCAGAAGCATAAGGGGATTT 219 >seq1383633 Length=301 Score = 86.0 bits (94), Expect = 7e-12 Identities = 140/207 (68%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 164950 TCTGGTGCTGTCGTTCCGTCTTCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAA 165009 |||||| || | |||| ||| | || |||||| | ||| || || || ||||| Sbjct 92 TCTGGTACTATTATTCCTACTTTTGCGGCGATCGGATTGCACGGTTACCCAGTTAGGGAA 151 Query 165010 GCTGCAACCATGGATGAATGGTTGTACAACGGTGGTCCTTACCAGTTGGTTGTCTTCCAC 165069 | |||| | || ||||| |||| || || |||||||||| || | |||| | ||| Sbjct 152 GATGCATCTATTGATGAGTGGTCATAAAATTGTGGTCCTTATAAGCTAATTGTTCTGCAC 211 Query 165070 TTCCTCATCGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTGTCTTACCGCCTCGGT 165129 ||| | | |||||||||||||||||||| || ||| || ||| Sbjct 212 TTCTTACTTNNNNNNNNNNNNNNNATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGT 271 Query 165130 ATGCGTCCTTGGATTTGCGTAGCATAT 165156 ||||||||||||||| || |||||| Sbjct 272 ATGCGTCCTTGGATTGCTGTTGCATAT 298 >seq780762 Length=275 Score = 84.2 bits (92), Expect = 2e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 165663 TTGGGCTGACGTTCTGAACCGTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGC 165722 ||||||||| | | ||||||||| || ||||||||||| ||||| || ||||| || Sbjct 275 TTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAACGTAATGC 216 Query 165723 TCACAACTTCCCCCTCGACCTCGCTGCTG 165751 |||||||||||| || ||| | ||||||| Sbjct 215 TCACAACTTCCCTCTAGACTTAGCTGCTG 187 >seq182068 Length=1727 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 167031 GCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGGGT 167090 |||||||| |||||||| ||||| || ||||| ||||| || ||||| || ||||||||| Sbjct 562 GCAGCAGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAATGAGGGT 503 Query 167091 ATGCGTTCTTGGATGG 167106 || ||| | ||||||| Sbjct 502 ATTCGTGCGTGGATGG 487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549020408250240