Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_
202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters
Query= NC_015289.1
Length=176184
Score E
Sequences producing significant alignments: (Bits) Value
seq900588 690 0.0
seq94777 603 1e-167
seq174834 206 3e-48
seq20701 140 4e-28
seq219505 122 1e-22
seq272447 96.9 4e-15
seq143040 96.9 4e-15
seq124049 96.9 4e-15
seq1972347 91.5 2e-13
seq542521 91.5 2e-13
seq1383633 86.0 7e-12
seq780762 84.2 2e-11
seq182068 84.2 2e-11
>seq900588
Length=4557
Score = 690 bits (764), Expect = 0.0
Identities = 748/989 (76%), Gaps = 2/989 (0%)
Strand=Plus/Plus
Query 164764 TTTTGCGAGTGGGTGACTTCCACCAATAACCGTCTTTATGTCGGTTGGTTCGGTGTTCTT 164823
|| ||| | ||| | ||| ||| | || |||||||| |||| |||||||||||| |
Sbjct 3000 TTCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTG 3059
Query 164824 ATGATCCCCTGTTTGCTCGCCGCTACAATTTGT-TTTATTACTGCATTCATCGCTGCTCC 164882
|||||||| || | |||| || | ||| ||||||| || ||||||||||| ||
Sbjct 3060 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 3118
Query 164883 CCCTGTGGACATTGATGGTATTCGTGAACCTGTCGCAGGTTCTCTAATGTACGGTAACAA 164942
|| || || |||||||||||||| || ||||| | |||||| || | || || |||||
Sbjct 3119 TCCAGTAGATATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAA 3178
Query 164943 CATCATCTCTGGTGCTGTCGTTCCGTCTTCTAACGCAATCGGACTTCACTTCTATCCTAT 165002
|| |||||||||||| | |||| ||||| || |||||| | ||||| || || ||
Sbjct 3179 TATTATCTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 3238
Query 165003 TTGGGAAGCTGCAACCATGGATGAATGGTTGTACAACGGTGGTCCTTACCAGTTGGTTGT 165062
||||||||||||| | | ||||| ||||| ||||| ||||||||||| || | ||||
Sbjct 3239 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 3298
Query 165063 CTTCCACTTCCTCATCGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTGTCTTACCG 165122
| |||||| | | ||||||||||| || |||||||||||||||||||| || |||
Sbjct 3299 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 3358
Query 165123 CCTCGGTATGCGTCCTTGGATTTGCGTAGCATATAGCGCACCTGTCGCTGCTGCTGCCGC 165182
|| |||||||||||||||||| || |||||| || ||||| || |||||| | ||
Sbjct 3359 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 3418
Query 165183 AGTTTTCCTGGTCTATCCTTTCGGTCAAGGGAGTTTCTCTGATGGTATGCCTCTTGGTAT 165242
|||||| || | || ||| | |||||||| || || ||||||||||||||| | || ||
Sbjct 3419 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTTTAGGAAT 3478
Query 165243 CTCTGGTACTTTTAACTATATGTTCGTCTTCCAAGCAGAACATAACATTCTTATGCATCC 165302
|||||||||||| |||| |||| | || ||||| ||||| || ||||| |||||||||||
Sbjct 3479 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCC 3538
Query 165303 GTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGG 165362
||||||||| | || || ||||| |||||||| || || || ||| ||||||||||||
Sbjct 3539 ATTCCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 3598
Query 165363 AAGTCTTGTTACTTCCTCACTCGTCCGCGAGACAACTGAAACAGAGAGTCAGAACTACGG 165422
| || || || | || | || || ||||||| || | || | ||
Sbjct 3599 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGG 3658
Query 165423 TTATAAGTTTGGACAAGAAGAAGAGACCTATAACATCGTCGCTGCCCACGGGTACTTCGG 165482
||| || ||||| ||||| |||||||| ||||| || || ||||| || || || || ||
Sbjct 3659 TTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGG 3718
Query 165483 TCGTCTCATTTTCCAATACGCATCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGC 165542
|| | || |||||||| || |||||||| || ||||| | ||||||||| | ||
Sbjct 3719 CCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGC 3778
Query 165543 AGCATGGCCTGTAGTTGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAA 165602
|| ||||||||||| || ||||||||||||||| | ||| |||| || ||||| |||||
Sbjct 3779 TGCTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAA 3838
Query 165603 CCTGAACGGTTTCAACTTCAACCAGTCTATTGTTGATAGTCAGAACAAAATCATCCCTAC 165662
||| || |||||||| |||||||| ||| | ||||||||||| | || |||
Sbjct 3839 CCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATAC 3898
Query 165663 TTGGGCTGACGTTCTGAACCGTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGC 165722
||||||||| | | ||||||||| || ||||||||||| ||||| || ||||| ||
Sbjct 3899 TTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAACGTAATGC 3958
Query 165723 TCACAACTTCCCCCTCGACCTCGCTGCTG 165751
|||||||||||| || ||| | |||||||
Sbjct 3959 TCACAACTTCCCTCTAGACTTAGCTGCTG 3987
>seq94777
Length=2712
Score = 603 bits (668), Expect = 1e-167
Identities = 741/1007 (74%), Gaps = 4/1007 (0%)
Strand=Plus/Plus
Query 166173 GACGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTCTT 166232
|| |||||| | | | || |||||||||||||| || |||||||| || | || ||
Sbjct 1078 GATGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCTGGCCTATTGCTCTTT 1137
Query 166233 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTCACTGGGACTACTTTCGTCACGAGTTGG 166292
|| ||||||| | ||| | || |||||| | || ||||| ||||| || || ||||
Sbjct 1138 CCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACAACTTTTGTAACTTCTTGG 1197
Query 166293 TATACTCATGGACTCGCAAGCAGTTATCTGGAGGGTGCAAACTTTCTTA-CTGCGGCAGT 166351
||||| |||||| | ||||| ||| |||| ||| || ||||||| | || |||||
Sbjct 1198 TATACCCATGGATTGGCAAGTTCCTATTTGGAAGGTTGTAA-TTTCTTAACCGCAGCAGT 1256
Query 166352 TTCTACTCCAGCAGATGCTATGGGTCATTCTCTACTTCTTCTCTGGGGTCCTGAGGCTCA 166411
|||||| || || || | | | || ||| | | || || ||||| || || || ||
Sbjct 1257 TTCTACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGGCCAGAAGCACA 1316
Query 166412 AGGGGATTTCGTCAGGTGGTGCCAACTTGGAGGGCTTTGGGCCTTTGTTGCTCTCCACGG 166471
||| ||||| | ||||| ||| | || || || ||| | ||||| |||||||||||
Sbjct 1317 AGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTATGGACTTTTGTAGCTCTCCACGG 1376
Query 166472 TGCTTTTGCCCTAATTGGTTTCATGCTTCGGCAGTTTGAAATCGCTCG-TCTAGTAGGTA 166530
|||||||| ||||| ||||||||| | || || |||||| | ||||| ||| | |
Sbjct 1377 GGCTTTTGCACTAATAGGTTTCATGTTACGCCAATTTGAACTTGCTCGGTCTGTTCAAT- 1435
Query 166531 TTCGTCCGTACAATGCAATCGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTC 166590
| || || || ||||||||| | || |||||||| |||||||| || ||| || || |
Sbjct 1436 TGCGGCCTTATAATGCAATCTCATTCTCTGGTCCAATTGCTGTTTTTGTTTCGGTATTCC 1495
Query 166591 TCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAA 166650
| || || || ||||| ||||| ||||||| || || || ||| || || |||| |
Sbjct 1496 TTATTTATCCACTGGGGCAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGA 1555
Query 166651 TCTTCCGATTCCTCCTTTTCCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCATA 166710
| || |||||| |||||||| | |||||||| || || ||||| |||||||||||||||
Sbjct 1556 TATTTCGATTCATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCATA 1615
Query 166711 TGATGGGTGTAGCAGGTATTCTCGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAG 166770
||||||| || || || | | || | || |||| | || || ||||| | || |
Sbjct 1616 TGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGAGCAACCG 1675
Query 166771 TAGAGAACACTCTGTATCAAGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTCTA 166830
|||| |||||||| | | | || ||||| |||||||| ||| || || || | |
Sbjct 1676 TAGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGTGCTTTTAACCCAA 1735
Query 166831 CTCAAGAGGAAGAAACCTATTCAATGGTTACAGCAAACCGCTATTGGTCTCAGATCTTCG 166890
|||||| |||||||| ||||||||||| || || ||||||| |||||| || ||||| |
Sbjct 1736 CTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTG 1795
Query 166891 GTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGG 166950
|| |||| ||| ||||| | ||||| |||||||||||||| ||||| || || | |
Sbjct 1796 GTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCACCG 1855
Query 166951 GTCTGTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACT 167010
|| | |||| ||| | || || | |||| | ||||| ||| | ||||| |||||||
Sbjct 1856 GTTTATGGATGAGTGCTATTGGCGTAGTTGGCTTGGCTCTGAACTTACGTGCCTATGACT 1915
Query 167011 TTGTTTCCCAAGAACTAAGGGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAGA 167070
|||||||||| ||| | | ||||| || |||||||| || || || ||||| ||||| |
Sbjct 1916 TTGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTCGAGACTTTCTACACCAAAA 1975
Query 167071 ACATTCTCTTGAATGAGGGTATGCGTTCTTGGATGGCAACTATCGATCAACCTCATGAGA 167130
| ||||| || || |||||||| ||| | ||||||||| || ||||| |||||||| |
Sbjct 1976 ATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAA 2035
Query 167131 GTTTCGTATTCCCTGAAGAGGTTCTTCCTAGAGGTAACGCTCTCTAA 167177
| | |||||||||| |||||||| || | || |||||||| |||
Sbjct 2036 ATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAA 2082
>seq174834
Length=1002
Score = 206 bits (228), Expect = 3e-48
Identities = 371/530 (70%), Gaps = 13/530 (2%)
Strand=Plus/Minus
Query 166194 CGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTCTTCCCACTGCTTATCTTGCTATT 166253
|||||| ||||||| || |||| ||| || | || |||| ||||||| | || |
Sbjct 602 CGTTTCATTTTTGTAGGATGGTATGGCCTATTGCTCTTTCCTTATGCTTATTTCTCTTTA 543
Query 166254 GGCGGTTGGCTC--ACTGGGACTACTTTCGTCACGAGTTGGTATACTCATGGACTCGCAA 166311
|| |||||| | || || || |||| || || || ||||||||||||||| ||||
Sbjct 542 GG-GGTTGGTTTTTACAGGAACAACTTATGTAACTTCTTTGTATACTCATGGACTGGCAA 484
Query 166312 GCAGTTATCTG-GAGGGTGCAAACTTTCTTA-CTGCGGCAGTTTCTACTCCAGCAGATGC 166369
| ||| || |||| || || ||||||| | ||| || ||||||| || ||
Sbjct 483 GTTCCTATTTGCGAGGTTGTAA--TTTCTTAACAGCGACAATTTCTACCTTTGCCAATAG 426
Query 166370 TATGGGTCATTCTCTACTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTC-GTCAGGT 166428
| | | || ||| | | || || ||||| || || || || | ||||| ||| | |
Sbjct 425 TTTAGCACACTCTTTGTTGCTACTATGGGGGCCAGAAGCACATGTAGATTTTAGTC-GTT 367
Query 166429 GGTGCCAACTTGGAGGGCTTTGGGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTG 166488
|||| ||| | || || || ||| | ||||| || |||||||| |||||||| ||||| |
Sbjct 366 GGTGTCAATTAGGCGGTCTATGGACTTTTGTAGCACTCCACGG-GCTTTTGCACTAATAG 308
Query 166489 GTTTCATGCTTCGGCAGTTTGAAATCGCTCG-TCTAGTAGGTATTCGTCCGTACAATGCA 166547
| |||||| | | || ||||| ||||| ||| | | | || ||||||
Sbjct 307 GGTTCATGTTACACCAACTTGAACGTGCTCGGTCTGTTCAAT-TGNNNNNTTATAATGCA 249
Query 166548 ATCGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGT 166607
||| | || ||||||| |||||| | || ||| ||| ||||| | || || || ||
Sbjct 248 ATCTCATTCTCTGGTCTAATTGCTATTTTTGTTTCTGTATTTCTTAGTTATCCACTCGG- 190
Query 166608 CAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCTT 166667
|||| ||||||| || || || ||| || || ||||||| || |||||| |||||
Sbjct 189 CAATATGGTTGGTTCTTTGCACCGAGTTTTGGTGTAGCAGCAATATTTCGATTCATCCTT 130
Query 166668 TTCCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCATATGATGGG 166717
||| | |||||||| || || ||||| |||| | |||||||||||||||
Sbjct 129 TTCTTCCAAGGATTTCATAATTGGACGTTGAATCTATTTCATATGATGGG 80
>seq20701
Length=725
Score = 140 bits (154), Expect = 4e-28
Identities = 218/308 (71%), Gaps = 3/308 (1%)
Strand=Plus/Minus
Query 166870 GCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTA 166929
||| |||||| || ||||| | | || ||| ||||| | ||||| ||||||||||
Sbjct 725 GCTTTTGGTCCCAAATCTTTGATGTTTTTTTTCC-AATAAACGTTGGTTACATTTCTTTA 667
Query 166930 TGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCATCGGTATTATTGGTCTTGCTC 166989
| || ||| || |||| || ||| | || | ||| || || || |||| | ||||
Sbjct 666 TCCTATTT-TTACTGTCATCGGTTTATGTATGAGTGATATTGGCATAGTTGGCTTGGCTC 608
Query 166990 TCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAAGGGCAGCAGAGGATCCTGAGT 167049
| ||| | ||||| ||||||||||||||| | ||| | | ||||| || |||| ||| |
Sbjct 607 TAAACTTACGTGCCTATGACTTTGTTTCCTAGGAAATGTGTGCAGCGGAAGATCGTGAAT 548
Query 167050 TTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGGGTATGCGTTCTTGGATGGCAA 167109
|||| | ||||| ||||| || ||| || ||||||| ||| | | | ||||||| |
Sbjct 547 TTGAGGCTTTCTACACCAAAAATATTACTTTAAATGAGGTTATTCATGCGTGGATGGAAG 488
Query 167110 CTATCGATCAACCTCATGAGAGTTTCGTATTCCCTGAAGAGGTTCTTCCTAGAGGTAACG 167169
| ||||| | | |||| | | | ||||||| || |||||||| || || |||
Sbjct 487 ATCGGGATCAGCGTAATGAAATTATTATATTCCC-GAGGAGGTTCTACCACATGGAAACA 429
Query 167170 CTCTCTAA 167177
|||| |||
Sbjct 428 CTCTTTAA 421
>seq219505
Length=1904
Score = 122 bits (134), Expect = 1e-22
Identities = 160/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 166956 TGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTT 167015
|||| ||| | || || | ||||| | || || ||| | |||| ||||||||||||
Sbjct 1899 TGGATGAGTGCTATTGGCGTAATTGGCTTGGCACTGAACTTATGTGCCTATGACTTTGTT 1840
Query 167016 TCCCAAGAACTAAGGGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAGAACATT 167075
||| | ||| | | ||||| || |||||||| | ||| || || | || || || |||
Sbjct 1839 TCCTAGGAAATCTGTGCAGCGGAAGATCCTGAATATGAGACTTTTGACACAAAAAATATT 1780
Query 167076 CTCTTGAATGAGGGTATGCGTTCTTGGATGGCAACTATCGATCAACCTCATGAGAGTTTC 167135
|| || || |||||||| ||| ||||||| | | |||||||||||||| | | |
Sbjct 1779 CTTTTAAACGAGGGTATTCGTGTGTGGATGGAAGCCGAGGATCAACCTCATGAAAATCTT 1720
Query 167136 GTATTCCCTGAAGAGGTTCTTCCTAGAGGTAACGCTCTCTAA 167177
|||||||||| |||| ||| || | || ||| |||| |||
Sbjct 1719 ATATTCCCTGAGGAGGCTCTGCCACGTGGAAACACTCTTTAA 1678
>seq272447
Length=1912
Score = 96.9 bits (106), Expect = 4e-15
Identities = 212/318 (67%), Gaps = 0/318 (0%)
Strand=Plus/Plus
Query 166769 AGTAGAGAACACTCTGTATCAAGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTC 166828
|||||| |||||| | | | | || | ||| |||||||| ||| || || | |
Sbjct 722 AGTAGAAAACACTATATTTTAGGACGATGATGGTGCAAATACCTTCCGCGCTTTTAAACC 781
Query 166829 TACTCAAGAGGAAGAAACCTATTCAATGGTTACAGCAAACCGCTATTGGTCTCAGATCTT 166888
||||||| |||||||| ||||| || | || || ||||| |||||||| || ||| |
Sbjct 782 AACTCAAGTTGAAGAAACTTATTCGGTGATCACTGCTAACCGTTATTGGTCCCAAATCAT 841
Query 166889 CGGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTAT 166948
||| |||| ||| ||||| | ||||| ||||||||||| | || | || | |
Sbjct 842 TGGTGTTGCTTTTTCCAATAAACGCTGGTTATATTTCTTTATGATATTCTTACCCTTCAA 901
Query 166949 GGGTCTGTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGA 167008
| | | || | ||| || | | |||| | ||||| ||| | | || ||||
Sbjct 902 TGATTTATGAATGAGTGTTATTGACGTAGTTGGCTTGGCTCTGAACTTACATGTCCATGA 961
Query 167009 CTTTGTTTCCCAAGAACTAAGGGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAA 167068
|||| ||||| | ||| | |||| || | |||||| || | | ||||| | |||
Sbjct 962 CTTTATTTCCAAGGAAATTTAGGCAACAAAAGATCCTACATTCAAGATTTTCTACATCAA 1021
Query 167069 GAACATTCTCTTGAATGA 167086
|| ||| | || |||||
Sbjct 1022 AAATATTATTTTAAATGA 1039
>seq143040
Length=3997
Score = 96.9 bits (106), Expect = 4e-15
Identities = 109/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 166584 GTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTC 166643
|| || || || || || ||||| ||||| ||||||| || || | ||| || ||
Sbjct 3865 GTATTCCTTATTTATCCACTGGGGCAATCTGGTTGGTTCTTTGCACTGAGTTTTGGCGTA 3806
Query 166644 TCAGCAATCTTCCGATTCCTCCTTTTCCTTCAAGGATTCCACAACTGGACACTGAACCCA 166703
| || || || ||||| |||||||| | |||||||| || || ||||| ||||||||
Sbjct 3805 ACGGCGATATTTTGATTCATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCA 3746
Query 166704 TTTCATATGATGGGTGTAGCAGGTAT 166729
|||||||||||||| || || || ||
Sbjct 3745 TTTCATATGATGGGAGTTGCCGGAAT 3720
>seq124049
Length=9620
Score = 96.9 bits (106), Expect = 4e-15
Identities = 247/369 (67%), Gaps = 12/369 (3%)
Strand=Plus/Plus
Query 166473 GCTTTTGCCCTAATTGGTTTCATGCTTCGGCAGTTTGAAATCGCTCG-TCTAGTAGGTAT 166531
|||||| | ||||| ||||||||| || |||||| | ||||| ||| | | |
Sbjct 9255 GCTTTTACACTAATAGGTTTCATGNNNNNNCAATTTGAACTTGCTCGGTCTGTTCAAT-T 9313
Query 166532 TCGTCCGTACAATGCAATCGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCT 166591
| || || ||||||||| | || |||||||| |||| | || | | ||| || ||
Sbjct 9314 GCAACCTTATAATGCAATCTCATTCTCTGGTCCAATTGTTACTTTTGCTTCTGTATTCCT 9373
Query 166592 CATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAAT 166651
|| | || ||||| ||||| ||| ||| || || | ||| || | || ||||
Sbjct 9374 TATTTGTCCACTGGGGCAATCTGGTTAGTTCTTTGCGCTGAGTTTTGGCG---CAACAAT 9430
Query 166652 CTTCC---GATTCCTCCTTTTCCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCA 166708
| | ||||| |||||||| | |||||||| || || ||| || ||||||||||
Sbjct 9431 GATACTTTGATTCATCCTTTTCTTCCAAGGATTTCATAATGGGAGT-TGTACCCATTTCA 9489
Query 166709 TATGATGGGTGTAGCAGGTATTCTCGGTGGTGCAT-TGCTTTCTGCCATCCATGGTGTTA 166767
||||||||| | || || | | | | || | | || | || || ||||| | |
Sbjct 9490 TATGATGGGATTTGCCGG-AGTATTAGGCATGAGTCTTCTATGCGCTATTCATGGAGCAA 9548
Query 166768 CAGTAGAGAACACTCTGTATCAAGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACT 166827
| |||| |||||||| | | | |||| ||| |||||||| || | || || ||
Sbjct 9549 C-CTAGAAAACACTCTATTTTAGGATGATGATGGTGCAAATACCTTTCATGCTTTTAACC 9607
Query 166828 CTACTCAAG 166836
| |||||||
Sbjct 9608 CAACTCAAG 9616
>seq1972347
Length=213
Score = 91.5 bits (100), Expect = 2e-13
Identities = 85/107 (79%), Gaps = 1/107 (1%)
Strand=Plus/Plus
Query 166975 TTATTGGTCTTG-CTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAAGGGCA 167033
||| | |||||| |||| ||| | ||||| ||||||||||||||||| ||| | | |||
Sbjct 105 TTAGTTGTCTTGGCTCTGAACTTACGTGCCTATGACTTTGTTTCCCAGGAAATCCGTGCA 164
Query 167034 GCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAGAACATTCTCTT 167080
|| || |||||||| || || || ||||| ||||| || ||||| ||
Sbjct 165 GCGGAAGATCCTGAATTCGAGACTTTCTACACCAAAAATATTCTTTT 211
>seq542521
Length=235
Score = 91.5 bits (100), Expect = 2e-13
Identities = 155/221 (70%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 166202 TTTTGTTGGTTGGTCTGGACTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTG 166261
|||||| || |||||||| || | || |||| ||||||| | ||| | || |||||
Sbjct 1 TTTTGTAGGATGGTCTGGCCTATTGCTCTTTCCTTGTGCTTATTTCGCTTTAGGGGGTTG 60
Query 166262 GCTCACTGGGACTACTTTCGTCACGAGTTGGTATACTCATGGACTCGCAAGCAGTTATCT 166321
| | || ||||| ||||| || || ||||||||| |||||| | | ||| ||| |
Sbjct 61 GTTTACAGGGACAACTTTTGTAACTTCTTGGTATACCCATGGATTGGAAAGTTCATATTT 120
Query 166322 GGAGGG-TGCAAACTTTCTTA-CTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCAT 166379
||| | || || ||||||| | | ||||||||||| || || || | | | ||
Sbjct 121 GGAATGATGTAA--TTTCTTAACCACAGCAGTTTCTACCCCTGCCAATAGTTTAGCACAC 178
Query 166380 TCTCTACTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTT 166420
||| | | || || ||||| || || || ||||||||||
Sbjct 179 TCTTTGTTGCTACTATGGGGGCCAGAAGCATAAGGGGATTT 219
>seq1383633
Length=301
Score = 86.0 bits (94), Expect = 7e-12
Identities = 140/207 (68%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 164950 TCTGGTGCTGTCGTTCCGTCTTCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAA 165009
|||||| || | |||| ||| | || |||||| | ||| || || || |||||
Sbjct 92 TCTGGTACTATTATTCCTACTTTTGCGGCGATCGGATTGCACGGTTACCCAGTTAGGGAA 151
Query 165010 GCTGCAACCATGGATGAATGGTTGTACAACGGTGGTCCTTACCAGTTGGTTGTCTTCCAC 165069
| |||| | || ||||| |||| || || |||||||||| || | |||| | |||
Sbjct 152 GATGCATCTATTGATGAGTGGTCATAAAATTGTGGTCCTTATAAGCTAATTGTTCTGCAC 211
Query 165070 TTCCTCATCGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTGTCTTACCGCCTCGGT 165129
||| | | |||||||||||||||||||| || ||| || |||
Sbjct 212 TTCTTACTTNNNNNNNNNNNNNNNATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGT 271
Query 165130 ATGCGTCCTTGGATTTGCGTAGCATAT 165156
||||||||||||||| || ||||||
Sbjct 272 ATGCGTCCTTGGATTGCTGTTGCATAT 298
>seq780762
Length=275
Score = 84.2 bits (92), Expect = 2e-11
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 165663 TTGGGCTGACGTTCTGAACCGTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGC 165722
||||||||| | | ||||||||| || ||||||||||| ||||| || ||||| ||
Sbjct 275 TTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAACGTAATGC 216
Query 165723 TCACAACTTCCCCCTCGACCTCGCTGCTG 165751
|||||||||||| || ||| | |||||||
Sbjct 215 TCACAACTTCCCTCTAGACTTAGCTGCTG 187
>seq182068
Length=1727
Score = 84.2 bits (92), Expect = 2e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 167031 GCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGGGT 167090
|||||||| |||||||| ||||| || ||||| ||||| || ||||| || |||||||||
Sbjct 562 GCAGCAGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAATGAGGGT 503
Query 167091 ATGCGTTCTTGGATGG 167106
|| ||| | |||||||
Sbjct 502 ATTCGTGCGTGGATGG 487
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 549020408250240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |