Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_015295.1 Length=47279 Score E Sequences producing significant alignments: (Bits) Value seq835595 80.6 8e-11 >seq835595 Length=206 Score = 80.6 bits (88), Expect = 8e-11 Identities = 99/131 (76%), Gaps = 6/131 (5%) Strand=Plus/Plus Query 37615 TGCCCGGTTATAGCATTGTCTCAGTTGAACCGTAATTTGGAGCAGCGTGCAAACAAGCGA 37674 ||||| |||||||| || |||||| | ||||||| | |||| | ||| | ||||| || Sbjct 55 TGCCCTGTTATAGCCTTATCTCAGCTCAACCGTAGTCTGGAAAATCGTCCCAACAAACGT 114 Query 37675 CCGTGCAATGCC-GACTTACGTGAGTCGGGCGTAATCGAGCAGGAAGCTGATGTGATTTT 37733 || || ||| | ||||||||||| ||||| | ||||| || || || ||| ||| | Sbjct 115 CC-TGTCATGTCTGACTTACGTGAATCGGGTGCGATCGAACAAGATGCCGATTTGA---T 170 Query 37734 CATGGTTTATC 37744 ||| ||||||| Sbjct 171 CAT-GTTTATC 180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147441039396642