Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_018454.1 Length=39974 Score E Sequences producing significant alignments: (Bits) Value seq2072468 91.5 4e-14 >seq2072468 Length=291 Score = 91.5 bits (100), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 5/205 (2%) Strand=Plus/Minus Query 33290 CGGCAAAACCACCAGCGGCTACGAGCGGAGCCACCGCATTGATTTACCGGCCGGTAAAAC 33349 |||||| ||||||| |||||||||| | ||||| ||||| |||| || | || Sbjct 245 CGGCAAGACCACCACGCGCTACGAGCGCTCGCTTCGCATCGATTTGCCGGACGCCACCAC 186 Query 33350 G---TGGAACCTTCGCCTGCGCAGGCTCACCCCGAACGCGAACAGCG-CACGCATCGGCG 33405 ||| | | ||| ||||| | || || |||||| ||||| | || | |||| || Sbjct 185 TGGCTGGCAGATACGCGTGCGCCGCCTGACGCCGAACCAGAACACCAACAAG-ATCGCCG 127 Query 33406 ACACCATGATGCTGGAAAGCTACACCACCATTATTGACGCGAAGCTGCGCTATCCGAACA 33465 |||||||| || ||| | | ||| | || ||||| ||||||||||||||||| | Sbjct 126 ACACCATGCTGGTGGCCGGTTGCACAGAGGTCATCGACGCCAAGCTGCGCTATCCGAATA 67 Query 33466 CCGCCTTACTCTACATGGAATTTGA 33490 | || | |||||||| ||||| || Sbjct 66 CTGCGCTGCTCTACATCGAATTCGA 42 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124641843935232