Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq900588 630 7e-176 seq94777 565 2e-156 seq174834 208 8e-49 seq143040 150 2e-31 seq747441 138 1e-27 seq2075000 118 1e-21 seq124049 118 1e-21 seq272447 109 6e-19 seq20701 105 7e-18 seq188012 98.7 1e-15 seq219505 91.5 1e-13 seq1383633 89.7 5e-13 seq888637 87.8 2e-12 >seq900588 Length=4557 Score = 630 bits (698), Expect = 7e-176 Identities = 721/966 (75%), Gaps = 2/966 (0%) Strand=Plus/Plus Query 8275 AATCGCTTGTATGTCGGCTGGTTTGGCGTTCTCATGATCCCAACCCTTCTTG-CCGCTAC 8333 ||||| | || |||| ||||| || ||| | |||||||| ||| || ||| |||| || Sbjct 3027 AATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCTACC-TTATTGACCGCAAC 3085 Query 8334 AATTTGCTTCATTACCGCATTCGTTGCTGCTCCTCCTGTGGACATCGACGGCATCCGCGA 8393 | || |||| ||| ||| | ||||| ||||| || || || || || || ||||| Sbjct 3086 TTCTGTATTTATTATCGCCTTCATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGCGA 3145 Query 8394 ACCAGTTGCTGGATCTCTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCAG 8453 || ||| |||| ||| | | || || ||||| || ||||||||||| || |||| | Sbjct 3146 GCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCTGGTGCTATTATTCCTAC 3205 Query 8454 CTCTAACGCAATTGGCCTCCACTTCTACCCCATCTGGGAAGCCGCTTCTCTTGATGAGTG 8513 ||| || || || | ||||| ||||| || |||||||| || ||| |||||||||| Sbjct 3206 TTCTGCGGCGATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAGTG 3265 Query 8514 GCTCTACAACGGTGGTCCTTACCAGCTTGTAGTTTTCCACTTCCTCCTTGGCGTCTTTGC 8573 | | ||||| ||||||||||| |||| | ||| | |||||| | ||||| || | Sbjct 3266 GTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 3325 Query 8574 TTATATGGGTCGTGAATGGGAACTTTCTTACCGCCTTGGCATGCGTCCTTGGATCTGTGT 8633 ||||||||||||||| ||||||||| || ||| || || |||||||||||||| ||| Sbjct 3326 TTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGT 3385 Query 8634 TGCATACTCTGCTCCTGTTGCCGCTGCTTCTGCTGTATTCCTTGTCTATCCTTTTGGTCA 8693 |||||| || ||||||||||| |||||| ||||||| ||| | | || ||| ||||||| Sbjct 3386 TGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATTGGTCA 3445 Query 8694 AGGTTCGTTCTCTGATGGTATGCCTCTTGGTATCTCCGGTACGTTCAACTATATGCTTGT 8753 ||| || ||||||||||||||| | || ||||| ||||| ||||||| |||| |||| Sbjct 3446 AGGAAGCTTTTCTGATGGTATGCCTTTAGGAATCTCTGGTACTTTCAACTTTATGATTGT 3505 Query 8754 CTTCCAGGCTGAGCACAACATCCTGATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGT 8813 |||||||| |||||||||||||| ||||| || ||||||||| | ||||| |||||||| Sbjct 3506 ATTCCAGGCAGAGCACAACATCCTTATGCATCCATTCCACATGTTAGGTGTAGCTGGTGT 3565 Query 8814 CTTCGGCGGATCTCTCTTTTCCGCAATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCG 8873 |||||||| || || || || ||||||||||| | || || ||| || | | Sbjct 3566 ATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAG 3625 Query 8874 TGAGACCACCGAAACCGAGTCTCAAAACTATGGCTACAAGTTCGGTCAAGAAGAGGAAAC 8933 || || || |||| || ||| || | || ||||| || |||||||| || || || Sbjct 3626 GGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGAAGAGAC 3685 Query 8934 TTACAACATTGTTGCCGCTCATGGCTACTTTGGTCGCTTGATCTTCCAATATGCATCTTT 8993 ||| || ||||| || |||||||| || ||||| || || |||||||||||||| ||| Sbjct 3686 TTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTT 3745 Query 8994 TAACAATTCTAGAAGCTTGCATTTCTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTT 9053 ||||| ||| | || || |||||| | ||||| |||||||| || ||||||||||| Sbjct 3746 CAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGAATCTGGTT 3805 Query 9054 TACCGCCCTCGGCGTCTCGACCATGGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTC 9113 || || | || | || |||||||||||||| ||||| ||||| |||||||| || Sbjct 3806 CACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATC 3865 Query 9114 CATTATCGACGGACAAGGACGAGTGCTCAACACCTGGGCAGACGTACTTAACCGCGCAGG 9173 | | || | ||||| || || | || || ||||| || | | ||||| || Sbjct 3866 TGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAA 3925 Query 9174 ACTCGGTATGGAAGTCATGCACGAAAGAAACGCACACAACTTCCCGCTTGACCTTGCGGC 9233 || ||||||||||| ||||||||| | || || ||||||||||| || ||| | || || Sbjct 3926 CCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACTTAGCTGC 3985 Query 9234 TGCTGA 9239 || ||| Sbjct 3986 TGTTGA 3991 >seq94777 Length=2712 Score = 565 bits (626), Expect = 2e-156 Identities = 717/986 (73%), Gaps = 0/986 (0%) Strand=Plus/Plus Query 9827 GATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTCTGGACTACTTCTTTTT 9886 ||||||||| | | | || || || |||||||| || |||||||| ||| | || ||| Sbjct 1078 GATGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCTGGCCTATTGCTCTTT 1137 Query 9887 CCCACTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGCACTACGTTTGTCACGAGTTGG 9946 || ||||||| | || | || || ||| |||| || || || ||||| || |||| Sbjct 1138 CCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACAACTTTTGTAACTTCTTGG 1197 Query 9947 TACACTCACGGACTTGCAAGTAGTTACCTTGAGGGTGCTAATTTCCTTACAGCGGCTGTC 10006 || || || ||| | |||||| || | || ||| ||||||| | || || || || Sbjct 1198 TATACCCATGGATTGGCAAGTTCCTATTTGGAAGGTTGTAATTTCTTAACCGCAGCAGTT 1257 Query 10007 TCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAG 10066 || || ||||| || | | | || ||| | | ||||| ||||| || || | || Sbjct 1258 TCTACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGGCCAGAAGCACAA 1317 Query 10067 GGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGA 10126 |||||||| || ||| || | || || || ||| ||||||| || |||||||| Sbjct 1318 GGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTATGGACTTTTGTAGCTCTCCACGGG 1377 Query 10127 GCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAGATTAATTGGAATC 10186 || || || |||| || || ||||||||||| ||||| || || | | || | | Sbjct 1378 GCTTTTGCACTAATAGGTTTCATGTTACGCCAATTTGAACTTGCTCGGTCTGTTCAATTG 1437 Query 10187 CGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTCAGTGTTTTCCTC 10246 || ||||| ||||| ||| | || ||||| || |||||||||||||| || ||||| Sbjct 1438 CGGCCTTATAATGCAATCTCATTCTCTGGTCCAATTGCTGTTTTTGTTTCGGTATTCCTT 1497 Query 10247 ATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGCGTCGCGGCGATT 10306 || |||||||| || || ||| |||||||||||||||||||||| ||||| || ||||| Sbjct 1498 ATTTATCCACTGGGGCAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATA 1557 Query 10307 TTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCATATG 10366 || || ||| | || ||| |||| || ||||||||||||||| | || || || |||||| Sbjct 1558 TTTCGATTCATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCATATG 1617 Query 10367 ATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCACGGAGTCACTGTA 10426 ||||||||||| || || | || | ||| || |||| || || || |||| || ||| Sbjct 1618 ATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGAGCAACCGTA 1677 Query 10427 GAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGCTTTTGATAGCACT 10486 |||||||| || | | | || || || ||||| || ||| |||||| | ||| Sbjct 1678 GAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGTGCTTTTAACCCAACT 1737 Query 10487 CAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCCCAGATATTTGGA 10546 |||| ||||| || ||||| ||||| ||||||||||| || |||||||| || ||||| Sbjct 1738 CAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGT 1797 Query 10547 ATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTACCTGTTATGGGT 10606 |||||||| ||||||||| ||| | |||||||||||||| |||||||| || | ||| Sbjct 1798 GTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCACCGGT 1857 Query 10607 CTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTT 10666 | |||| | ||||||| | |||| | ||||| || | ||||| || || ||| Sbjct 1858 TTATGGATGAGTGCTATTGGCGTAGTTGGCTTGGCTCTGAACTTACGTGCCTATGACTTT 1917 Query 10667 GTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTCTATACGAAGAAT 10726 || || || || ||| | || | |||||||||||||| ||||| ||||| || || ||| Sbjct 1918 GTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTCGAGACTTTCTACACCAAAAAT 1977 Query 10727 ATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTTGACCAACCACACGAAAGC 10786 || ||| | ||||| ||| ||||||| ||||||||| | || || || || |||| Sbjct 1978 ATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAAT 2037 Query 10787 TTTGTTTTCCCAGAAGAAGTTCTTCC 10812 || | ||||| || || ||||| || Sbjct 2038 CTTATATTCCCTGAGGAGGTTCTACC 2063 >seq174834 Length=1002 Score = 208 bits (230), Expect = 8e-49 Identities = 418/614 (68%), Gaps = 7/614 (1%) Strand=Plus/Minus Query 9827 GATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTCTGGACTACTTCTTTTT 9886 ||||||||| | | | | || || ||||||| || |||| ||| ||| | || ||| Sbjct 623 GATGACTGGTTACGAAGGGGCCGTTTCATTTTTGTAGGATGGTATGGCCTATTGCTCTTT 564 Query 9887 CCCACTGCTTATCTTGCAATTGGTGGCTGGCTT--ACTGGCACTACGTTTGTCACGAGTT 9944 || ||||||| | | | || || ||| || || || || || | ||| || || Sbjct 563 CCTTATGCTTATTTCTCTTTAGG-GGTTGGTTTTTACAGGAACAACTTATGTAACTTCTT 505 Query 9945 GGTACACTCACGGACTTGCAAGTAGTTACCTT-GAGGGTGCTAATTTCCTTACAGCGGCT 10003 ||| ||||| ||||| |||||| || | |||| || ||||||| | |||||| | Sbjct 504 TGTATACTCATGGACTGGCAAGTTCCTATTTGCGAGGTTG-TAATTTCTTAACAGCGACA 446 Query 10004 GTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 10063 | || || ||| || | | | || ||| | | ||||| ||||| || || | Sbjct 445 ATTTCTACCTTTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGGCCAGAAGCA 386 Query 10064 CAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTTTTGTGGCGCTCCAC 10123 || | |||||| || ||| || | || || || ||| ||||||| || |||||| Sbjct 385 CATGTAGATTTTAGTCGTTGGTGTCAATTAGGCGGTCTATGGACTTTTGTAGCACTCCAC 326 Query 10124 GGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAGATTAATTGGA 10183 || || || || |||| || || ||||||| ||| |||| | || | | || | Sbjct 325 GG-GCTTTTGCACTAATAGGGTTCATGTTACACCAACTTGAACGTGCTCGGTCTGTTCAA 267 Query 10184 ATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTCAGTGTTTTC 10243 | ||| ||||| ||| | || ||||| | |||||| ||||||| ||| || Sbjct 266 TTGNNNNNTTATAATGCAATCTCATTCTCTGGTCTAATTGCTATTTTTGTTTCTGTATTT 207 Query 10244 CTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGCGTCGCGGCG 10303 || | ||||||||||| || | | ||||||||||||| |||||||| || || || || Sbjct 206 CTTAGTTATCCACTCGG-CAATATGGTTGGTTCTTTGCACCGAGTTTTGGTGTAGCAGCA 148 Query 10304 ATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCAT 10363 || || || ||| | || ||| |||| || ||||||||||||||| | |||| || ||| Sbjct 147 ATATTTCGATTCATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAATCTATTTCAT 88 Query 10364 ATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCACGGAGTCACT 10423 ||||||||| |||| || || | || | ||| | |||| | || || |||| | Sbjct 87 ATGATGGGATTTGCCGGAGTATTAGGCGTGGCTTTTCTATGCACTATTCATGGAGCAAAC 28 Query 10424 GTAGAAAACACACT 10437 || ||||||| || Sbjct 27 ATACAAAACACTCT 14 >seq143040 Length=3997 Score = 150 bits (166), Expect = 2e-31 Identities = 151/196 (77%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 10238 GTTTTCCTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGCGTC 10297 || ||||| || |||||||| || || ||| ||||||||||||| | |||||| ||||| Sbjct 3865 GTATTCCTTATTTATCCACTGGGGCAATCTGGTTGGTTCTTTGCACTGAGTTTTGGCGTA 3806 Query 10298 GCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAATCCC 10357 ||||||| || | ||| | || ||| |||| || ||||||||||||||| | || || Sbjct 3805 ACGGCGATATTTTGATTCATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCA 3746 Query 10358 TTCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCACGGA 10417 || ||||||||||||||||| || ||| | || | ||| || ||| || || || ||| Sbjct 3745 TTTCATATGATGGGAGTTGCCGGAATATTAGGCGCGGCTCTGCTACGCGCTATTCATGGA 3686 Query 10418 GTCACTGTAGAAAACA 10433 | | |||||||||| Sbjct 3685 GCAAACGTAGAAAACA 3670 >seq747441 Length=209 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 10119 TCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAGATTAA 10178 ||||||| || || || |||| || || ||||||||||| ||||| || || | | Sbjct 1 TCCACGGGGCTTTTGCACTAATAGGTTTCATGTTACGCCAATTTGAACTTGCTCGGTCTG 60 Query 10179 TTGGAATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTCAGTG 10238 || | | || ||||| ||||| ||| | || ||| | || ||| ||||||||| | Sbjct 61 TTCAATTGCGGCCTTATAATGCAATCTCATTCTCTCGTCCAATTTTTGTTTTTGTTTCGG 120 Query 10239 TTTTCCTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGCGTCG 10298 | ||||| || |||||||| || || ||| |||||||||||||||||||||| ||||| | Sbjct 121 TATTCCTTATTTATCCACTGGGGCAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAG 180 Query 10299 CGGCGATTTTCCGCTTCCTTCTCTTCCTC 10327 | ||||| || || ||| | || ||| || Sbjct 181 CAGCGATATTTCGATTCATCCTTTTCTTC 209 >seq2075000 Length=209 Score = 118 bits (130), Expect = 1e-21 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 10137 TAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAGATTAATTGGAATCCGACCTTACA 10196 |||| || || ||||||||||| ||||| || || | | || | | || ||||| | Sbjct 200 TAATAGGTTTCATGTTACGCCAATTTGAACTTGCTCGGTCTGTTCAATTGCGGCCTTATA 141 Query 10197 ATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTCAGTGTTTTCCTCATCTATCCAC 10256 |||| ||| | || ||||| || ||| |||||| | | | ||||| | ||||||| Sbjct 140 ATGCAATCTCATTCTCTGGTCCAATTTTTGTTTTCATTTCTTTATTCCTTAGTTATCCAC 81 Query 10257 TCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGCGTCGCGGCGATTTTCCGCTTCC 10316 | || || |||||||||||||||||||||||||| || || ||||| || | ||| Sbjct 80 TAGGGCAATCTAGTTGGTTCTTTGCGCCGAGTTTTCATGTAGCAGCGATATTTTGATTCA 21 Query 10317 TTCTCTTCCTCCAGGGCTTT 10336 |||| ||| |||| || ||| Sbjct 20 TTCTTTTCTTCCAAGGATTT 1 >seq124049 Length=9620 Score = 118 bits (130), Expect = 1e-21 Identities = 209/302 (69%), Gaps = 2/302 (1%) Strand=Plus/Plus Query 10189 ACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTCAGTGTTTTCCTCAT 10248 |||||| ||||| ||| | || ||||| || |||| | ||||| ||| ||||| || Sbjct 9317 ACCTTATAATGCAATCTCATTCTCTGGTCCAATTGTTACTTTTGCTTCTGTATTCCTTAT 9376 Query 10249 CTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGCGTCGCGGCGATTTT 10308 | |||||| || || ||| ||| ||||||||||| |||||| |||| | ||| | Sbjct 9377 TTGTCCACTGGGGCAATCTGGTTAGTTCTTTGCGCTGAGTTTTGGCGCAACAATGATACT 9436 Query 10309 CCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCATATGAT 10368 | ||| | || ||| |||| || ||||||||| ||| | | | || || |||||||| Sbjct 9437 TTGATTCATCCTTTTCTTCCAAGGATTTCATAATGGGA-GTTGTACCCATTTCATATGAT 9495 Query 10369 GGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCACGGAGTCACTGTAGA 10428 |||| |||| || || | || | || |||| || || || |||| || |||| Sbjct 9496 GGGATTTGCCGGAGTATTAGGCATGAGTCTTCTATGCGCTATTCATGGAG-CAACCTAGA 9554 Query 10429 AAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGCTTTTGATAGCACTCA 10488 |||||| || | | | |||| || ||||| || || | |||||| | ||||| Sbjct 9555 AAACACTCTATTTTAGGATGATGATGGTGCAAATACCTTTCATGCTTTTAACCCAACTCA 9614 Query 10489 AG 10490 || Sbjct 9615 AG 9616 >seq272447 Length=1912 Score = 109 bits (120), Expect = 6e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 10409 ATCCACGGAGTCACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTC 10468 || ||| |||| | ||||||||||| | | | | || | || ||||| || ||| Sbjct 708 ATTCACAGAGTAAAAGTAGAAAACACTATATTTTAGGACGATGATGGTGCAAATACCTTC 767 Query 10469 AAAGCTTTTGATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTC 10528 |||||| | ||||||| ||||| || |||||| || | ||||||||||||| Sbjct 768 CGCGCTTTTAAACCAACTCAAGTTGAAGAAACTTATTCGGTGATCACTGCTAACCGTTAT 827 Query 10529 TGGTCCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTG 10588 |||||||| || |||| |||||||| ||||||||||||| | ||||||||||| | Sbjct 828 TGGTCCCAAATCATTGGTGTTGCTTTTTCCAATAAACGCTGGTTATATTTCTTTATGATA 887 Query 10589 TTTGTACC 10596 || |||| Sbjct 888 TTCTTACC 895 >seq20701 Length=725 Score = 105 bits (116), Expect = 7e-18 Identities = 166/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 10526 TTCTGGTCCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATG 10585 || |||||||| || |||| || |||| ||||||||| ||| | ||||||||||| Sbjct 723 TTTTGGTCCCAAATCTTTGATGTTTTTTTTC-CAATAAACGTTGGTTACATTTCTTTATC 665 Query 10586 CTGTTTGTACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTC 10645 || ||| || |||| || ||| | || | | |||||| || |||| | ||||| Sbjct 664 CTATTTTTA-CTGTCATCGGTTTATGTATGAGTGATATTGGCATAGTTGGCTTGGCTCTA 606 Query 10646 AATCTTCGTGCTTACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTT 10705 || | ||||| || || ||||| || | || || | || | ||||||| ||||||| Sbjct 605 AACTTACGTGCCTATGACTTTGTTTCCTAGGAAATGTGTGCAGCGGAAGATCGTGAATTT 546 Query 10706 GAGACGTTCTATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGG 10760 ||| | ||||| || || ||||| | | || || | | ||| ||| ||||||| Sbjct 545 GAGGCTTTCTACACCAAAAATATTACTTTAAATGAGGTTATTCATGCGTGGATGG 491 >seq188012 Length=2438 Score = 98.7 bits (108), Expect = 1e-15 Identities = 75/89 (84%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 8573 CTTATATGGGTCGTGAATGGGAACTTTCTTACCGCCTTGGCATGCGTCCTTGGATCTGTG 8632 ||||||||||| |||| ||||||||| || ||| || || |||||||||||||| || Sbjct 2349 CTTATATGGGTTGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTG 2408 Query 8633 TTGCATACTCTGCTCCTGTTGCCGCTGCT 8661 ||||||| || ||||||||||| |||||| Sbjct 2409 TTGCATATTCAGCTCCTGTTGCAGCTGCT 2437 >seq219505 Length=1904 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 10620 CTATTGGAATCATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTTGTATCTCAAGAGA 10679 ||||||| | ||||| | || || || | |||| || || ||||| || | || | Sbjct 1889 CTATTGGCGTAATTGGCTTGGCACTGAACTTATGTGCCTATGACTTTGTTTCCTAGGAAA 1830 Query 10680 TCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTCTATACGAAGAATATCCTTCTGAACG 10739 || | || | ||||||||||||| |||||| || | || || ||||| ||| | |||| Sbjct 1829 TCTGTGCAGCGGAAGATCCTGAATATGAGACTTTTGACACAAAAAATATTCTTTTAAACG 1770 Query 10740 AAGGTCTTCGTGCATGGATGGCACCAGTTGACCAACCACACGAAAGCTTTGTTTTCCCAG 10799 | ||| |||||| ||||||| | | | || ||||| || |||| || | ||||| | Sbjct 1769 AGGGTATTCGTGTGTGGATGGAAGCCGAGGATCAACCTCATGAAAATCTTATATTCCCTG 1710 Query 10800 AAGAAGTTCTTCC 10812 | || | ||| || Sbjct 1709 AGGAGGCTCTGCC 1697 >seq1383633 Length=301 Score = 89.7 bits (98), Expect = 5e-13 Identities = 109/154 (71%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 8489 GGGAAGCCGCTTCTCTTGATGAGTGGCTCTACAACGGTGGTCCTTACCAGCTTGTAGTTT 8548 |||||| || ||| ||||||||||| || || |||||||||| |||| | ||| Sbjct 147 GGGAAGATGCATCTATTGATGAGTGGTCATAAAATTGTGGTCCTTATAAGCTAATTGTTC 206 Query 8549 TCCACTTCCTCCTTGGCGTCTTTGCTTATATGGGTCGTGAATGGGAACTTTCTTACCGCC 8608 | |||||| | ||| ||||||||||| ||||||||| || ||| | Sbjct 207 TGCACTTCTTACTTNNNNNNNNNNNNNNNATGGGTCGTGAGTGGGAACTTAGTTTCCGTC 266 Query 8609 TTGGCATGCGTCCTTGGATCTGTGTTGCATACTC 8642 | || |||||||||||||| ||||||||| || Sbjct 267 TGGGTATGCGTCCTTGGATTGCTGTTGCATATTC 300 >seq888637 Length=1801 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/209 (69%), Gaps = 8/209 (4%) Strand=Plus/Plus Query 10094 GGGGGACTCTGGGCTTTTGTGGCGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTA 10153 || || || ||| ||||| | || || | | | | || || |||| || || |||||| Sbjct 450 GGCGGTCTATGGACTTTTATAGCTCTTTAAGAAACTTTTGCACTAATAGGTTTCATGTTA 509 Query 10154 CGCCAGTTTGAGCTGGC---GAGATTAATTGGAATCCGACCTTACAATGCTATCGCGTTT 10210 ||||| ||| | || || | | ||||||| || ||||| ||||| ||| || Sbjct 510 CGCCAATTTAAACTTGCTCTGTGTTTAATTG-----CGGCCTTATAATGCAATCTTATTC 564 Query 10211 TCTGGGCCTATTGCTGTTTTTGTCAGTGTTTTCCTCATCTATCCACTCGGACAGTCTAGT 10270 ||||| | || | || |||||| | | | || | | ||||||||||| || |||||| Sbjct 565 TCTGGTTCAATGGTTGCTTTTGTTACTATATTTATTACTTATCCACTCGGGCAATCTAGT 624 Query 10271 TGGTTCTTTGCGCCGAGTTTCGGCGTCGC 10299 ||| || ||| ||||||| ||||| || Sbjct 625 TGGCTCACTGCATCGAGTTTTGGCGTAGC 653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 503065071144000