Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_019717.1 Length=45366 Score E Sequences producing significant alignments: (Bits) Value seq2072468 86.0 2e-12 >seq2072468 Length=291 Score = 86.0 bits (94), Expect = 2e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 16036 CGGCAAGACAACTTCCGGCTACGAACGCAGCCATCGTATCGATTTACCACAGGCAGGCAG 16095 ||||||||| || | ||||||| ||| | ||| |||||||| || | || || Sbjct 245 CGGCAAGACCACCACGCGCTACGAGCGCTCGCTTCGCATCGATTTGCCGGACGCCACCAC 186 Query 16096 TACATGGACGGTGCGCCTGCGTAAGCTCACGGCGGATGCCAACAGCGCGAAAATTGGCGA 16155 | ||| | | ||| |||| || ||| || | |||| | || || | ||| Sbjct 185 TGGCTGGCAGATACGCGTGCGCCGCCTGACGCCGAACCAGAACACCAACAAGATCGCCGA 126 Query 16156 CACGATGACGCTGCAGAGCTACACAGAGGTCATTGACGCCAAACTGCGTTATCCAAACAC 16215 ||| ||| | || | | |||||||||||| |||||||| ||||| ||||| || || Sbjct 125 CACCATGCTGGTGGCCGGTTGCACAGAGGTCATCGACGCCAAGCTGCGCTATCCGAATAC 66 Query 16216 CGCGCTGTTGTACATCGAATTCGAC 16240 |||||| | ||||||||||||||| Sbjct 65 TGCGCTGCTCTACATCGAATTCGAC 41 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141470490331936