Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_019927.1 Length=47611 Score E Sequences producing significant alignments: (Bits) Value seq1975374 113 1e-20 >seq1975374 Length=208 Score = 113 bits (124), Expect = 1e-20 Identities = 151/207 (73%), Gaps = 5/207 (2%) Strand=Plus/Minus Query 29586 GAGTGGTTCGGGCACAAGCCGGACTTCATCATCACGCTGGCTGCTGACTATTGC-CTGCA 29644 || |||||||| || ||||| |||||||||||| ||||||||||||| ||| | || Sbjct 205 GATTGGTTCGGCGACGTGCCGGCCTTCATCATCACCTTGGCTGCTGACTACTGCGCCGCC 146 Query 29645 ATGCTCCGATTTAGACTTCTGCGCACTGGTAGAGCATGAGCTTTATCACATCGCCCAAGA 29704 || ||||| ||||||||||| ||||| ||||| ||| | | ||||||||| || | Sbjct 145 -TGTTCCGACGCTGACTTCTGCGCGCTGGTGGAGCACGAGTTATTTCACATCGCTCAGGC 87 Query 29705 AGTGGATGAGTTTGGCTCACCGAAGTTTTACCGCGACTCAGGTAAGCCGAAGCTTTGCAT 29764 |||| | | ||| | || ||||| || || ||| ||| |||||| || Sbjct 86 CAAGGATCAATACGGCGCTCCCAAGTTCACCCAAGA---AGGACTGCCCAAGCTTGAGAT 30 Query 29765 GCGCGGACATGATGTTGAGGAATTCGT 29791 ||||||||| || ||||| || ||||| Sbjct 29 GCGCGGACACGACGTTGAAGAGTTCGT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148477224597626