Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_019933.2 Length=43870 Score E Sequences producing significant alignments: (Bits) Value seq836591 86.0 2e-12 >seq836591 Length=208 Score = 86.0 bits (94), Expect = 2e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 18882 GTTTCCGTCGAGCCAGATAATGACCTTGCCGGGGCAACCGTTTCCGTTGTGCCCGAGAGC 18941 || |||||| |||| || |||||||| || || | || ||| ||| ||||| | Sbjct 207 GTGTCCGTCCAGCCGGAGAATGACCTCAAGGGCGCCGCGGTCGACGTGGTGGCCGAGGGG 148 Query 18942 CAGGAATTCTGGAACTACGTCAAGACGGGTCAGTACATCCCGGCACCGGGTGGCTCTAGT 19001 | ||| |||||| ||||||||||||| || |||||||| ||| || | ||||| Sbjct 147 CCGGAGTTCTGGCACTACGTCAAGACCGGCCAGTACATTCCGCCAGAGAACGGCTCGCAG 88 Query 19002 CTATCCACGCGGCCAATCTCCAGCAATTTGGCGATTAGTGAGAATCAGGTTGTTCAAGGT 19061 || |||| ||||| | |||||||| || || | ||| ||||| || || || Sbjct 87 CTGGCCACCCGGCCGGTGGCCAGCAATCTGCGTATCACCGAGCGCCAGGTGGTGCAGGGG 28 Query 19062 GATACTGTCTACACAGAGCT 19081 ||||| || | | | ||||| Sbjct 27 GATACGGTGTTCTCCGAGCT 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136801414847984