Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq900588 688 0.0 seq94777 587 8e-163 seq174834 244 1e-59 seq747441 114 1e-20 seq542521 107 2e-18 seq219505 100 3e-16 seq20701 100 3e-16 seq2075000 96.9 4e-15 seq780762 95.1 1e-14 seq143040 93.3 5e-14 seq188012 91.5 2e-13 seq95322 87.8 2e-12 seq1480420 86.0 7e-12 seq1383633 84.2 2e-11 seq113504 84.2 2e-11 >seq900588 Length=4557 Score = 688 bits (762), Expect = 0.0 Identities = 750/993 (76%), Gaps = 2/993 (0%) Strand=Plus/Plus Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTG 160935 || || |||||| | || ||||| || || || ||||| | || |||||||| || || Sbjct 3000 TTCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTG 3059 Query 160936 ATGATTCCCTGCTTGCTCGCTGCTACCATTTGT-TTCATCATTGCCTTCGTTGGTGCTCC 160994 ||||| || ||| | | || || | ||| || || || |||||| | | ||| || Sbjct 3060 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 3118 Query 160995 CCCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAACAA 161054 || || || || || || ||||| || || || ||||||| | | ||||||||||| Sbjct 3119 TCCAGTAGATATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAA 3178 Query 161055 CATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCAT 161114 || |||||||||||| |||| ||| ||||| || ||||| ||||||| ||||| || Sbjct 3179 TATTATCTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 3238 Query 161115 CTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGT 161174 |||||||| ||| | | || || ||| | ||||| |||||||||| | || |||| Sbjct 3239 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 3298 Query 161175 GTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACCG 161234 | |||||| | |||| | | ||| ||||||||||||||||||||| || ||| Sbjct 3299 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 3358 Query 161235 TCTGGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTGC 161294 |||||| ||||||||||||||| || ||||| || |||||||| || || || | ||| Sbjct 3359 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 3418 Query 161295 AGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCAT 161354 || ||| || | || ||| | |||||||| || ||||||| |||||| | || || Sbjct 3419 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTTTAGGAAT 3478 Query 161355 CTCTGGTACGTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGCACCC 161414 ||||||||| ||||||| ||| |||| ||||| |||||||||||||| || ||||| || Sbjct 3479 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCC 3538 Query 161415 CTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGG 161474 ||||| ||| | || ||||| ||||| || |||||||| || |||||||| ||||| || Sbjct 3539 ATTCCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 3598 Query 161475 TTCGCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTATGG 161534 ||| |||| |||||| || | | ||||| || ||||| || || || | || Sbjct 3599 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGG 3658 Query 161535 TTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACTTCGG 161594 |||||| || |||||||| |||||||| || || || || ||||| || || || || || Sbjct 3659 TTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGG 3718 Query 161595 TCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTTGC 161654 || | || |||||||| ||| ||||||||||| || || | ||||||||| | || Sbjct 3719 CCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGC 3778 Query 161655 TGCTTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAA 161714 |||||||||||| || || |||||||||||||| | || | || || ||||| ||||| Sbjct 3779 TGCTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAA 3838 Query 161715 CCTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAACAC 161774 ||| ||||||||||| |||||||| ||| | ||||||||||| ||| ||||| || || Sbjct 3839 CCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATAC 3898 Query 161775 CTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATGC 161834 ||||| || | ||||||||||| ||||| |||||||| |||||||| || ||||| Sbjct 3899 TTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAACGTAATGC 3958 Query 161835 TCACAACTTCCCTCTTGACCTTGCTGCTGCTGA 161867 ||||||||||||||| ||| | ||||||| ||| Sbjct 3959 TCACAACTTCCCTCTAGACTTAGCTGCTGTTGA 3991 >seq94777 Length=2712 Score = 587 bits (650), Expect = 8e-163 Identities = 735/1003 (73%), Gaps = 4/1003 (0%) Strand=Plus/Plus Query 162129 GACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTT 162188 || |||||| | ||| ||||||||||||||||| || |||||||| || | || ||| Sbjct 1078 GATGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCTGGCCTATTGCTCTTT 1137 Query 162189 CCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTTCGTCACGAGTTGG 162248 || ||||||| | ||| | ||||||||| |||| ||||| ||||| || || |||| Sbjct 1138 CCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACAACTTTTGTAACTTCTTGG 1197 Query 162249 TATACTCACGGACTTGCGAGTTCCTATCTTGAGGGTGCAAACTTTCTTA-CTGCGGCAGT 162307 ||||| || ||| | || ||||||||| | || ||| || ||||||| | || ||||| Sbjct 1198 TATACCCATGGATTGGCAAGTTCCTATTTGGAAGGTTGTAA-TTTCTTAACCGCAGCAGT 1256 Query 162308 TTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGGGTCCTGAGTCTCA 162367 |||||| || || | | | | || ||| | |||| |||||||| || || | || Sbjct 1257 TTCTACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGGCCAGAAGCACA 1316 Query 162368 AGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACGG 162427 ||| || || | || ||||| ||| | || || || ||||||||||| || |||||||| Sbjct 1317 AGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTATGGACTTTTGTAGCTCTCCACGG 1376 Query 162428 AGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATCGGTA 162486 || |||||||| |||||||||||| | ||||| |||||||| || || || || | Sbjct 1377 GGCTTTTGCACTAATAGGTTTCATGTTACGCCAATTTGAACTTGCTCGGTCTGTTCAAT- 1435 Query 162487 TTCGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTCGTTAGTGTTTTTC 162546 | || ||||| ||||| || | ||||| ||||| |||||||| || ||| || || | Sbjct 1436 TGCGGCCTTATAATGCAATCTCATTCTCTGGTCCAATTGCTGTTTTTGTTTCGGTATTCC 1495 Query 162547 TTATCTATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAA 162606 |||| ||||| |||| ||||| |||||||| || ||| || || || ||||| | Sbjct 1496 TTATTTATCCACTGGGGCAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGA 1555 Query 162607 TCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTAAATCCTTTTCACA 162666 | || |||||| | || ||| ||||||| || ||||| |||||| | || || ||||| | Sbjct 1556 TATTTCGATTCATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCATA 1615 Query 162667 TGATGGGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTATTCATGGAGTGACAG 162726 ||||||| || || || | | || | || |||| | ||||||||||||| || | Sbjct 1616 TGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGAGCAACCG 1675 Query 162727 TTGAAAATACACTGTACGAAGATGGCGAACAAGCAAACACTTTTAAAGCATTTGACTCCA 162786 | ||||| || || | || || || || ||||| || || || ||| || | | Sbjct 1676 TAGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGTGCTTTTAACCCAA 1735 Query 162787 CACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTTCTGGTCACAGATTTTCG 162846 | || | |||||||| ||||| ||||| ||||| |||||||| ||||| || || || | Sbjct 1736 CTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTG 1795 Query 162847 GTATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTATGCTCTTTGTTCCCGTCATGG 162906 || |||||||| || || |||||||| |||||||||||||| ||||| ||||||| | Sbjct 1796 GTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCACCG 1855 Query 162907 GTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAATCTTCGTGCTTACGACT 162966 || | |||| ||| |||| || | |||| | ||||| || | ||||| || |||| Sbjct 1856 GTTTATGGATGAGTGCTATTGGCGTAGTTGGCTTGGCTCTGAACTTACGTGCCTATGACT 1915 Query 162967 TTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGTTTGAGACGTTCTATACAAAGA 163026 |||| || || ||| | ||||| || ||||| ||||| || ||||| ||||| || || | Sbjct 1916 TTGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTCGAGACTTTCTACACCAAAA 1975 Query 163027 ACATTCTTCTGAATGAAGGACTTCGAGCATGGTTAGCACCAGTGGACCAACCTCATGAGA 163086 | |||||| | || || || |||| || ||| | ||| | ||| || |||||||| | Sbjct 1976 ATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAA 2035 Query 163087 ACTTTGTGTTCCCTGAAGAGGTCTTGCCAAGAGGCAACGCTCT 163129 | || | |||||||| ||||| | ||| | || |||||||| Sbjct 2036 ATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 2078 >seq174834 Length=1002 Score = 244 bits (270), Expect = 1e-59 Identities = 418/597 (70%), Gaps = 11/597 (2%) Strand=Plus/Minus Query 162129 GACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTT 162188 || |||||| | ||| | ||||||| ||||||| || |||| ||| || | || ||| Sbjct 623 GATGACTGGTTACGAAGGGGCCGTTTCATTTTTGTAGGATGGTATGGCCTATTGCTCTTT 564 Query 162189 CCCACTGCTTATCTTGCTCTTGGGGGTTGGCTT--ACTGGGACTACTTTCGTCACGAGTT 162246 || ||||||| | || || |||||||| || || || || |||| || || || Sbjct 563 CCTTATGCTTATTTCTCT-TTAGGGGTTGGTTTTTACAGGAACAACTTATGTAACTTCTT 505 Query 162247 GGTATACTCACGGACTTGCGAGTTCCTATCTT-GAGGGTGCAAACTTTCTTA-CTGCGGC 162304 ||||||||| ||||| || ||||||||| | |||| || || ||||||| | ||| | Sbjct 504 TGTATACTCATGGACTGGCAAGTTCCTATTTGCGAGGTTGTAA--TTTCTTAACAGCGAC 447 Query 162305 AGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGGGTCCTGAGTC 162364 | ||||||| || | | | | || ||| | |||| |||||||| || || | Sbjct 446 AATTTCTACCTTTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGGCCAGAAGC 387 Query 162365 TCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCA 162424 || | || || | || ||||| ||| | || || || ||||||||||| || ||||| Sbjct 386 ACATGTAGATTTTAGTCGTTGGTGTCAATTAGGCGGTCTATGGACTTTTGTAGCACTCCA 327 Query 162425 CGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATCG 162483 ||| || |||||||| ||||| |||||| | | ||| |||||| || || || || Sbjct 326 CGG-GCTTTTGCACTAATAGGGTTCATGTTACACCAACTTGAACGTGCTCGGTCTGTTCA 268 Query 162484 GTATTCGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTCGTTAGTGTTT 162543 | | ||| ||||| || | ||||| |||| |||||| | || ||| ||| | Sbjct 267 AT-TGNNNNNTTATAATGCAATCTCATTCTCTGGTCTAATTGCTATTTTTGTTTCTGTAT 209 Query 162544 TTCTTATCTATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAG 162603 |||||| ||||| | || |||| |||||||| |||||| || || || |||| Sbjct 208 TTCTTAGTTATCCACTCGG-CAATATGGTTGGTTCTTTGCACCGAGTTTTGGTGTAGCAG 150 Query 162604 CAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTAAATCCTTTTC 162663 |||| || |||||| | || ||| ||||||| || ||||| |||||| | |||| |||| Sbjct 149 CAATATTTCGATTCATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAATCTATTTC 90 Query 162664 ACATGATGGGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTATTCATGGAG 162720 | |||||||| | || || | | || | || || || | |||||||||||| Sbjct 89 ATATGATGGGATTTGCCGGAGTATTAGGCGTGGCTTTTCTATGCACTATTCATGGAG 33 >seq747441 Length=209 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 162421 TCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCAC-GACTT 162479 ||||||| || |||||||| |||||||||||| | ||||| |||||||| || | | || Sbjct 1 TCCACGGGGCTTTTGCACTAATAGGTTTCATGTTACGCCAATTTGAACTTGCTCGGTCTG 60 Query 162480 ATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTCGTTAGT 162539 || | | || ||||| ||||| || | ||||| |||| ||| ||| || ||| Sbjct 61 TTCAAT-TGCGGCCTTATAATGCAATCTCATTCTCTCGTCCAATTTTTGTTTTTGTTTCG 119 Query 162540 GTTTTTCTTATCTATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTC 162599 || || ||||| ||||| |||| ||||| |||||||| || ||| || || || Sbjct 120 GTATTCCTTATTTATCCACTGGGGCAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCGTA 179 Query 162600 GCAGCAATCTTCCGATTCCTGCTCTTCCTC 162629 ||||| || || |||||| | || ||| || Sbjct 180 GCAGCGATATTTCGATTCATCCTTTTCTTC 209 >seq542521 Length=235 Score = 107 bits (118), Expect = 2e-18 Identities = 168/237 (71%), Gaps = 4/237 (2%) Strand=Plus/Plus Query 162158 TTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTG 162217 |||||| || |||||||| || | || ||||| ||||||| | ||| | |||||||| Sbjct 1 TTTTGTAGGATGGTCTGGCCTATTGCTCTTTCCTTGTGCTTATTTCGCTTTAGGGGGTTG 60 Query 162218 GCTTACTGGGACTACTTTCGTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCT 162277 | |||| ||||| ||||| || || ||||||||| || ||| | | ||||| ||| | Sbjct 61 GTTTACAGGGACAACTTTTGTAACTTCTTGGTATACCCATGGATTGGAAAGTTCATATTT 120 Query 162278 TGAGGG-TGCAAACTTTCTTA-CTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCAT 162335 || | || || ||||||| | | ||||||||||| || || | | | | || Sbjct 121 GGAATGATGTAA--TTTCTTAACCACAGCAGTTTCTACCCCTGCCAATAGTTTAGCACAC 178 Query 162336 TCTCTTCTGCTTCTATGGGGTCCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAA 162392 ||| | |||| |||||||| || || | ||||||| || | || ||||| ||| Sbjct 179 TCTTTGTTGCTACTATGGGGGCCAGAAGCATAAGGGGATTTTACTCGTTGGTGTCAA 235 >seq219505 Length=1904 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 162912 TGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAATCTTCGTGCTTACGACTTTGTA 162971 |||| ||| |||| || | ||||| | || || || | |||| || |||||||| Sbjct 1899 TGGATGAGTGCTATTGGCGTAATTGGCTTGGCACTGAACTTATGTGCCTATGACTTTGTT 1840 Query 162972 TCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGTTTGAGACGTTCTATACAAAGAACATT 163031 || | ||| | |||| || ||||| ||||| | |||||| || | ||||| || ||| Sbjct 1839 TCCTAGGAAATCTGTGCAGCGGAAGATCCTGAATATGAGACTTTTGACACAAAAAATATT 1780 Query 163032 CTTCTGAATGAAGGACTTCGAGCATGGTTAGCACCAGTGGACCAACCTCATGAGAACTTT 163091 ||| | || || || |||| | ||| | | | | | ||| ||||||||||| || || Sbjct 1779 CTTTTAAACGAGGGTATTCGTGTGTGGATGGAAGCCGAGGATCAACCTCATGAAAATCTT 1720 Query 163092 GTGTTCCCTGAAGAGGTCTTGCCAAGAGGCAACGCTCT 163129 | |||||||| |||| ||||| | || ||| |||| Sbjct 1719 ATATTCCCTGAGGAGGCTCTGCCACGTGGAAACACTCT 1682 >seq20701 Length=725 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 162826 GCTTCTGGTCACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTA 162885 |||| ||||| || || || | | || |||| || || |||||||| |||||||||| Sbjct 725 GCTTTTGGTCCCAAATCTTTGATGTTTTTTTTCC-AATAAACGTTGGTTACATTTCTTTA 667 Query 162886 TGCTCTTTGTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTC 162945 | || ||| || | ||||| ||| | || | ||| ||| || || |||| | |||| Sbjct 666 TCCTATTT-TTACTGTCATCGGTTTATGTATGAGTGATATTGGCATAGTTGGCTTGGCTC 608 Query 162946 TCAATCTTCGTGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGT 163005 | || | ||||| || |||||||| || | ||| | |||| || ||||| | ||| | Sbjct 607 TAAACTTACGTGCCTATGACTTTGTTTCCTAGGAAATGTGTGCAGCGGAAGATCGTGAAT 548 Query 163006 TTGAGACGTTCTATACAAAGAACATTCTTCTGAATGA 163042 ||||| | ||||| || || || ||| | | ||||| Sbjct 547 TTGAGGCTTTCTACACCAAAAATATTACTTTAAATGA 511 >seq2075000 Length=209 Score = 96.9 bits (106), Expect = 4e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 162432 TTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCAC-GACTTATCGGTATTCG 162490 |||||||| |||||||||||| | ||||| |||||||| || | | || || | | || Sbjct 207 TTTGCACTAATAGGTTTCATGTTACGCCAATTTGAACTTGCTCGGTCTGTTCAAT-TGCG 149 Query 162491 TCCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTAT 162550 ||||| ||||| || | ||||| ||||| ||| ||| ||| || | | || |||| Sbjct 148 GCCTTATAATGCAATCTCATTCTCTGGTCCAATTTTTGTTTTCATTTCTTTATTCCTTAG 89 Query 162551 CTATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTT 162610 ||||| | || ||||| |||||||| || ||| || || ||||| || || Sbjct 88 TTATCCACTAGGGCAATCTAGTTGGTTCTTTGCGCCGAGTTTTCATGTAGCAGCGATATT 29 Query 162611 CCGATTCCTGCTCTTCCTCCAAGGGTT 162637 ||||| | || ||| ||||||| || Sbjct 28 TTGATTCATTCTTTTCTTCCAAGGATT 2 >seq780762 Length=275 Score = 95.1 bits (104), Expect = 1e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 161776 TGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATGCT 161835 ||||| || | ||||||||||| ||||| |||||||| |||||||| || |||||| Sbjct 274 TGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAACGTAATGCT 215 Query 161836 CACAACTTCCCTCTTGACCTTGCTGCTGCTGA 161867 |||||||||||||| ||| | ||||||| ||| Sbjct 214 CACAACTTCCCTCTAGACTTAGCTGCTGTTGA 183 >seq143040 Length=3997 Score = 93.3 bits (102), Expect = 5e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 162540 GTTTTTCTTATCTATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTC 162599 || || ||||| ||||| |||| ||||| |||||||| |||| | || || || Sbjct 3865 GTATTCCTTATTTATCCACTGGGGCAATCTGGTTGGTTCTTTGCACTGAGTTTTGGCGTA 3806 Query 162600 GCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTAAATCCT 162659 | || || || ||||| | || ||| ||||||| || ||||| |||||| | || || Sbjct 3805 ACGGCGATATTTTGATTCATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCA 3746 Query 162660 TTTCACATGATGGGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTATTCATGGA 162719 ||||| |||||||| || || || || | || | || |||| |||||||||||| Sbjct 3745 TTTCATATGATGGGAGTTGCCGGAATATTAGGCGCGGCTCTGCTACGCGCTATTCATGGA 3686 Query 162720 GTGACAGTTGAAAA 162733 | | || ||||| Sbjct 3685 GCAAACGTAGAAAA 3672 >seq188012 Length=2438 Score = 91.5 bits (100), Expect = 2e-13 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 161201 CTTACATGGGTCGTGAGTGGGAACTTTCTTACCGTCTGGGAATGCGTCCTTGGATTTGCG 161260 |||| |||||| |||||||||||||| || ||||||||| ||||||||||||||| | Sbjct 2349 CTTATATGGGTTGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTG 2408 Query 161261 TAGCATACTCTGCTCCTGTCGCTGCAGC 161288 | ||||| || |||||||| || || || Sbjct 2409 TTGCATATTCAGCTCCTGTTGCAGCTGC 2436 >seq95322 Length=2287 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 157691 GGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAAT 157750 ||| |||||||||||||||||||||| ||| |||||| ||| | ||| ||||||| ||| Sbjct 1127 GGGATGTAGCGCAGCTTGGTAGCGCGTTTGTTTTGGGTACAAAATGTCACAGGTTCAAAT 1186 Query 157751 CCTGTCACCCCGACTTAT 157768 ||||||| ||| || ||| Sbjct 1187 CCTGTCATCCCTACCTAT 1204 >seq1480420 Length=245 Score = 86.0 bits (94), Expect = 7e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 162129 GACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTT 162188 || |||||| |||| ||||||||||||||||| || |||||||| || | || ||| Sbjct 138 GATGACTGGTGGCAAAGGGACCGTTTCGTTTTTGTAGGATGGTCTGGCCTATTGCTCTTT 197 Query 162189 CCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTT 162235 || ||||||| | ||| | ||||||| | |||| ||||| ||||| Sbjct 198 CCTTGTGCTTATTTCGCTTTAGGGGGTTCGTTTACAGGGACAACTTT 244 >seq1383633 Length=301 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/209 (67%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 161062 TCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCATCTGGGAA 161121 |||||| || |||| ||| ||| | || ||||| ||||| ||||| | ||||| Sbjct 92 TCTGGTACTATTATTCCTACTTTTGCGGCGATCGGATTGCACGGTTACCCAGTTAGGGAA 151 Query 161122 GCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGTGTTCCAC 161181 | ||| | | || || ||| || || ||||||||| | || |||| | ||| Sbjct 152 GATGCATCTATTGATGAGTGGTCATAAAATTGTGGTCCTTATAAGCTAATTGTTCTGCAC 211 Query 161182 TTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACCGTCTGGGA 161241 ||| | || ||||||||||||||||||||| || ||||||||| Sbjct 212 TTCTTACTTNNNNNNNNNNNNNNNATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGT 271 Query 161242 ATGCGTCCTTGGATTTGCGTAGCATACTC 161270 ||||||||||||||| || ||||| || Sbjct 272 ATGCGTCCTTGGATTGCTGTTGCATATTC 300 >seq113504 Length=2992 Score = 84.2 bits (92), Expect = 2e-11 Identities = 89/116 (77%), Gaps = 1/116 (1%) Strand=Plus/Plus Query 161710 TTCAACCTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATC 161769 |||||||| ||||||||||| |||||| | ||||| |||| |||||| ||| |||| Sbjct 2878 TTCAACCTAAATGGTTTCAATTTCAACTAATCTATAGTTGTTAGTCAAGGTCGCTTTATT 2937 Query 161770 AACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGA 161825 || || ||||| || | |||| |||| | ||||| |||| ||| |||||||| Sbjct 2938 AATACTTGGGCTGATATCATCAAACGTGTTAACCTTGGTATGG-AGTAATGCACGA 2992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533520144317160