Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_020488.1 Length=38682 Score E Sequences producing significant alignments: (Bits) Value seq7353 86.0 2e-12 >seq7353 Length=217 Score = 86.0 bits (94), Expect = 2e-12 Identities = 122/169 (72%), Gaps = 7/169 (4%) Strand=Plus/Minus Query 25782 CGACAACAATCTCAGTAGTGTACTGATCTTGACCTTGCTGG--TTCTGCCACTTGCGCGT 25839 |||| || || ||||| ||||| | ||||| ||| | || | ||||| ||| || Sbjct 164 CGACCACGATTTCAGTGGTGTAACG--CTTGA---TGCCGTCTTTTTCCCACTCGCGGGT 110 Query 25840 GCGCAACTTGCCTTCAATGTAAAGCTTTGAGCCTTTGCGTGTGTACTCGCCGGCCACCTC 25899 ||| ||||||||| ||||| | || || |||||||| |||||| || || | ||| Sbjct 109 TTGCAGCTTGCCTTCGATGTAGACCTGCGAACCTTTGCGCAGGTACTCACCAGCGATCTC 50 Query 25900 TGCCAACTTCCCGTATAACACAACACGGTGCCACTCTGTTTTTTCTACC 25948 ||||| ||| ||| | | | ||||||||||| || ||||| || ||| Sbjct 49 TGCCACCTTGCCGAACATCGACACACGGTGCCATTCGGTTTTCTCGACC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120609460562728