Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq94777 569 3e-157 seq900588 547 8e-151 seq174834 178 2e-39 seq219505 118 1e-21 seq747441 114 2e-20 seq20701 111 2e-19 seq263076 109 7e-19 seq143040 102 1e-16 seq2075000 96.9 4e-15 seq1972347 95.1 1e-14 seq272447 86.0 8e-12 seq56660 86.0 8e-12 seq780762 82.4 9e-11 seq542521 82.4 9e-11 seq124049 82.4 9e-11 >seq94777 Length=2712 Score = 569 bits (630), Expect = 3e-157 Identities = 728/1003 (73%), Gaps = 0/1003 (0%) Strand=Plus/Minus Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCG 101769 |||||||| || | ||| | ||||| ||||| |||| || |||||||| || ||||| Sbjct 2078 AGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGATTTTCATGAGGCTGATCC 2019 Query 101770 ACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTC 101829 | ||||| ||| ||||| | ||| || || || || || || || |||||||| ||| Sbjct 2018 TGAGCTGCCATCCACGCACGAATACCCTCGTTTAAAAGAATATTTTTGGTGTAGAAAGTC 1959 Query 101830 TCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGG 101889 ||||| || |||||||| ||||| | ||| || ||||| ||||||||||| ||||| | | Sbjct 1958 TCGAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACAAAGTCATAGGCACGTAAG 1899 Query 101890 TTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAAG 101949 || ||||| | |||| | || || | ||| |||| | ||| | || || ||||| Sbjct 1898 TTCAGAGCCAAGCCAACTACGCCAATAGCACTCATCCATAAACCGGTGACGGGTACAAAT 1839 Query 101950 AGCATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCAG 102009 |||||||||||||| ||||| | ||||| ||| |||| |||||||||||| ||||| Sbjct 1838 AGCATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACACCAAAGATTTGGGACCAA 1779 Query 102010 AAACGGTTTGCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGTGGAATCGAATGCTTTG 102069 || ||||| || || |||||||||||||| ||||| |||| || | | || || | Sbjct 1778 AAGCGGTTAGCAGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGCACGG 1719 Query 102070 AAAGTGTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGGATT 102129 || || ||||| |||||| || ||| | |||||||| || || || | || || || Sbjct 1718 AAGGTATTTGCACCATCACCGTCCTCAAATAGAGTGTTTTCTACGGTTGCTCCATGAATA 1659 Query 102130 GCTGACAGCAGTGCTCCTCCCAGGATACCTGCAACACCCATCATATGGAATGGGTTGAGC 102189 || | ||||| || | || | | || ||||| ||||||||||| |||||||| | | Sbjct 1658 GCGCATAGCAGAGCCGCGCCTAATACTCCGGCAACTCCCATCATATGAAATGGGTTCAAC 1599 Query 102190 GTCCAGTTATGGAAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAAAC 102249 ||||| ||||| || || || | ||| || | ||||| |||||||||||| || ||||| Sbjct 1598 GTCCAATTATGAAATCCTTGGAAGAAAAGGATGAATCGAAATATCGCTGCTACGCCAAAA 1539 Query 102250 GAGGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAAAA 102309 |||||||||||||||| || || || || ||||| || || || || |||||| Sbjct 1538 CTCGGCGCAAAGAACCAACCAGATTGCCCCAGTGGATAAATAAGGAATACCGAAACAAAA 1479 Query 102310 ACAGCGATAGGCCCAGAGAACGCAATAGCATTGTACGGACGAATTCCAATTAACCTAGCC 102369 ||||| || || |||||||| | || ||||| || || || | | || ||| ||| Sbjct 1478 ACAGCAATTGGACCAGAGAATGAGATTGCATTATAAGGCCGCAATTGAACAGACCGAGCA 1419 Query 102370 AACTCGAATTGACGAAGCATGAAACCAATGAGGGCAAATGCACCGTGGAGAGCCACAAAA 102429 | || ||||| || | ||||||||| || || ||||| || ||||||||||| |||||| Sbjct 1418 AGTTCAAATTGGCGTAACATGAAACCTATTAGTGCAAAAGCCCCGTGGAGAGCTACAAAA 1359 Query 102430 GCCCAGAGTCCCCCAAGTTGGACCCACCTGACGAAATCTCCTTGAGCTTCAGGACCCCAA 102489 | ||| || || || | ||| ||| | ||||||||||| ||||| || ||||| Sbjct 1358 GTCCATAGACCGCCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCTGGCCCCCAT 1299 Query 102490 AGTAGAAGAAGAGAATGACCCATAGAGTCAGCAGGCGTTGACACAGCAGCTGTAAGGAAA 102549 ||||| | | ||| || | | | | ||||| || || || || || || | |||| Sbjct 1298 AGTAGCAACAAAGAGTGTGCTAAACTATTGGCAGGGGTAGAAACTGCTGCGGTTAAGAAA 1239 Query 102550 TTAGCACCTTCAAGGTAACTAGACGCAAGCCCGTGGGTATACCAGGAAGTAGCAAACGTC 102609 ||| |||||| | || | || | || ||||||||||| ||||| |||| || Sbjct 1238 TTACAACCTTCCAAATAGGAACTTGCCAATCCATGGGTATACCAAGAAGTTACAAAAGTT 1179 Query 102610 GTGCCAGTAAGCCAGCCCCCAATTGCGAGATAAGCAGTGGGAAAAAGAAGTAGTCCAGAC 102669 || || |||| ||| ||||| | |||| ||||||| ||||| || | ||| |||||| Sbjct 1178 GTCCCTGTAAACCAACCCCCTAAAGCGAAATAAGCACAAGGAAAGAGCAATAGGCCAGAC 1119 Query 102670 CAACCCACAAAGACAAAGCGATCTCGTTTAATCCAGTCATCCA 102712 || || ||||| || || || || | | | ||||||||||| Sbjct 1118 CATCCTACAAAAACGAAACGGTCCCTTCGTAACCAGTCATCCA 1076 >seq900588 Length=4557 Score = 547 bits (606), Expect = 8e-151 Identities = 725/1009 (72%), Gaps = 5/1009 (0%) Strand=Plus/Minus Query 103170 CAGCAGCAAGGTCAAGGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCA 103229 ||||||| | ||| || |||||||||||||| ||||| |||||||| ||||||||||| | Sbjct 3987 CAGCAGCTAAGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAA 3928 Query 103230 GACCAGCGCGGTTGAGAACGTCTGCCCAGGTGTTCAACACACGACCCTGACCATCAAGGA 103289 | ||| ||||||| | || ||||| || || | || ||||| |||| ||||| | Sbjct 3927 GGTTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTA 3868 Query 103290 TGGACTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATGGTGCTAACACCAAGTGCGG 103349 || |||||||| ||||| || || |||||||| ||||| || |||| ||| | || | Sbjct 3867 CAGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACCTAAAGCAG 3808 Query 103350 TGAACCAGATACCCACTACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGTTGT 103409 |||||||||| || ||||| || | ||||||| Sbjct 3807 TGAACCAGATTCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGT 3748 Query 103410 TGAATGATGCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACGATGTTGT 103469 |||| || ||||||||||| || || || || ||||||||||| || || || || | Sbjct 3747 TGAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATATTAT 3688 Query 103470 ATGTCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCAGTCGTCT 103529 | |||||||||||||| || || |||||||| | || ||||||| ||||||| || | Sbjct 3687 AAGTCTCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTT 3628 Query 103530 CAC-GAACCAGCGAGGACGTAACAAGCGAACCGTGCATAGCACTGAACAGTGAACCACCG 103588 | | || | | | || || |||| ||||| |||||||||||||| || ||||| ||| Sbjct 3627 CCCTGATCAAACTAGAGGTTACCAAG-GAACCATGCATAGCACTGAATAGGGAACCGCCG 3569 Query 103589 AAGACTCCAGCAACGCCCAGCATGTGGAAGGGGTGCATGAGAATGTTATGTTCGGCTTGG 103648 || || ||||| || || | ||||||||| || ||||| || ||||| || || || ||| Sbjct 3568 AATACACCAGCTACACCTAACATGTGGAATGGATGCATAAGGATGTTGTGCTCTGCCTGG 3509 Query 103649 AAGACCAGCATGTAGTTGAAGGTTCCCGAAATACCCAAAGGCATAGCATCGGAGAACGAA 103708 || || | ||| ||||||| || || || || || ||||||||| |||| || || Sbjct 3508 AATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAAAGGCATACCATCAGAAAAGCTT 3449 Query 103709 CCTTGACCAAAGGGGTAGACCAAGAATACTGCGGACGCAGCCGCAACAGGAGCAGAGTAT 103768 |||||||||| ||||| | |||||| || || | ||||| ||||||||||| || ||| Sbjct 3448 CCTTGACCAATAGGGTAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATAT 3389 Query 103769 GCGACACAGATCCAGGGGCGCATGCCCAGACGGTAGGACAATTCCCACTCACGTCCCATA 103828 || ||| ||||| || ||||| ||||||||| | | |||||||||||| |||||| Sbjct 3388 GCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATA 3329 Query 103829 TATGCATAGATGCCAATGAGGAAGTGGAATACTACAAGTTGGAAAGGACCACCGTTATAC 103888 || | | |||| | |||||| | || | || | |||||||||| || || Sbjct 3328 TAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTAT 3269 Query 103889 AGCCACTCATCAAGAGATGCTGCTTCCCAAATGGGATAGAAGTGAAGACCAATTGCGTTG 103948 | ||||||||||| |||||| ||||||||||| || || ||||| | || || || Sbjct 3268 AACCACTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATCGCCGCA 3209 Query 103949 GAGGAGGGAACAACTGCACCAGAGATGATGTTGTTACCGTACATGAGTGAACCAGCGACG 104008 || | |||| || ||||||||||| || ||||| || || | | ||||||| || Sbjct 3208 GAAGTAGGAATAATAGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAACA 3149 Query 104009 GGTTCACGAATGCCGTCGATATCGACGGGAGGTGCTGCTACGAAAGCAACGATGAA-GCA 104067 || || ||||| || || ||||| || ||||| || || | ||| || | || || || Sbjct 3148 GGCTCGCGAATACCATCAATATCTACTGGAGGGGCAGCGATGAAGGCGATAATAAATACA 3089 Query 104068 GATGGTTGCCGCCAACAGAGTTGGGATCATCAGCACACCGAACCAACCAACATAGAGACG 104127 || ||||| | ||| | || |||||||||| ||||||||||| || | || ||||| Sbjct 3088 GA-AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACG 3030 Query 104128 GTTGTTTGTCGATGTAACCCACTCGCAGAAGTTATCCCACGAGGATTGT 104176 || | || || | ||| | ||||||| | ||||| ||| |||| Sbjct 3029 ATTTTCAGTGCTAGTTATCCAGTTGCAGAAGCGACCCCAC-AGGCTTGT 2982 >seq174834 Length=1002 Score = 178 bits (196), Expect = 2e-39 Identities = 382/562 (68%), Gaps = 13/562 (2%) Strand=Plus/Plus Query 102157 CCTGCAACACCCATCATATGGAATGGGTTGAGCGTCCAGTTATGGAAGCCCTGTAGGAAG 102216 || |||| ||||||||||| ||| | || | |||||| ||||| || || || | ||| Sbjct 71 CCGGCAAATCCCATCATATGAAATAGATTCAACGTCCAATTATGAAATCCTTGGAAGAAA 130 Query 102217 AGTAGGAATCTAAATATCGCTGCAACACCAAACGAGGGCGCAAAGAACCAACTGGACTGT 102276 || | ||||| |||||| ||||| |||||||| || ||||||||||||| | || Sbjct 131 AGGATGAATCGAAATATTGCTGCTACACCAAAACTCGGTGCAAAGAACCAACCATATTG- 189 Query 102277 CCGAGAGGATAGATGAGAAACACACTGACAAAAACAGCGATAGGCCCAGAGAACGCAATA 102336 ||||| ||||| | ||||| ||| ||||||| ||| || | |||||||| | || Sbjct 190 CCGAGTGGATAACTAAGAAATACAGAAACAAAAATAGCAATTAGACCAGAGAATGAGATT 249 Query 102337 GCATTGTACGGACGAATTCCAATTAACCTAGCCAACTCGAATTGACGAAGCATGAAACCA 102396 ||||| || | | || ||| ||| || | ||| | | |||||| || Sbjct 250 GCATTATAANNNNNCAATTGAACAGACCGAGCACGTTCAAGTTGGTGTAACATGAACCCT 309 Query 102397 ATGAGGGCAAATGCACCGTGGAGAGCCACAAAAGCCCAGAGTCCCCCAAGTTGGACCCAC 102456 || || ||||| || |||||||| || ||||||| ||| || || || | ||| ||| Sbjct 310 ATTAGTGCAAAAGC-CCGTGGAGTGCTACAAAAGTCCATAGACCGCCTAATTGACACCAA 368 Query 102457 CTGAC-GAAATCTCCTTGAGCTTCAGGACCCCAAAGTAGAAGAAGAGAATGACCCATAGA 102515 | ||| |||||| | || ||||| || ||||| ||||| | | ||| || | | | Sbjct 369 C-GACTAAAATCTACATGTGCTTCTGGCCCCCATAGTAGCAACAAAGAGTGTGCTAAACT 427 Query 102516 GTCAGCAGGCGTTGACACAGCAGCTGTAAGGAAATTAGCACCT-TCAA--GGTAACTAGA 102572 | ||| || || | | ||||| | ||||||| |||| ||| | |||| Sbjct 428 ATTGGCAAAGGTAGAAATTGTCGCTGTTAAGAAATTACAACCTCGCAAATAGGAACT--- 484 Query 102573 CGCAAGCCCGTGGGTATACCAGGAAGTAGCAAACGTCGTGCCAGT--AAGCCAGCCCCCA 102630 || || || || |||||| | ||||| || | || || || || || ||| |||| | Sbjct 485 TGCCAGTCCATGAGTATACAAAGAAGTTACATAAGTTGTTCCTGTAAAAACCAACCCCTA 544 Query 102631 ATTGCGAGATAAGCAGTGGGAAAAAGAAGTAGTCCAGACCAACCCACAAAGACAAAGCGA 102690 | | || ||||||| ||||| || | ||| ||| |||| || ||||| | || || Sbjct 545 A-AGAGAAATAAGCATAAGGAAAGAGCAATAGGCCATACCATCCTACAAAAATGAAACGG 603 Query 102691 TCTCGTTTAATCCAGTCATCCA 102712 | | | | ||||||||||| Sbjct 604 CCCCTTCGTAACCAGTCATCCA 625 >seq219505 Length=1904 Score = 118 bits (130), Expect = 1e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCG 101769 |||| ||| || | ||||| |||| ||||| |||| || |||||||| |||||||| Sbjct 1682 AGAGTGTTTCCACGTGGCAGAGCCTCCTCAGGGAATATAAGATTTTCATGAGGTTGATCC 1741 Query 101770 ACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTC 101829 | | | ||| ||| |||| | ||| || || || || || || ||||||| || ||| Sbjct 1742 TCGGCTTCCATCCACACACGAATACCCTCGTTTAAAAGAATATTTTTTGTGTCAAAAGTC 1801 Query 101830 TCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGG 101889 || | || |||||||| ||||| | ||| || | ||| ||||||||||| |||| | | Sbjct 1802 TCATATTCAGGATCTTCCGCTGCACAGATTTCCTAGGAAACAAAGTCATAGGCACATAAG 1861 Query 101890 TTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCA 101927 || || || | ||||| | || || | ||| |||| Sbjct 1862 TTCAGTGCCAAGCCAATTACGCCAATAGCACTCATCCA 1899 >seq747441 Length=209 Score = 114 bits (126), Expect = 2e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 102213 GAAGAGTAGGAATCTAAATATCGCTGCAACACCAAACGAGGGCGCAAAGAACCAACTGGA 102272 ||| || | ||||| |||||||||||| || ||||| |||||||||||||||| || Sbjct 206 GAAAAGGATGAATCGAAATATCGCTGCTACGCCAAAACTCGGCGCAAAGAACCAACCAGA 147 Query 102273 CTGTCCGAGAGGATAGATGAGAAACACACTGACAAAAACAGCGATAGGCCCAGAGAACGC 102332 || || || ||||| || || || || ||||||||| || || | |||||| | Sbjct 146 TTGCCCCAGTGGATAAATAAGGAATACCGAAACAAAAACAAAAATTGGACGAGAGAATGA 87 Query 102333 AATAGCATTGTACGGACGAATTCCAATTAACCTAGCCAACTCGAATTGACGAAGCATGAA 102392 || ||||| || || || | | || ||| ||| | || ||||| || | |||||| Sbjct 86 GATTGCATTATAAGGCCGCAATTGAACAGACCGAGCAAGTTCAAATTGGCGTAACATGAA 27 Query 102393 ACCAATGAGGGCAAATGCACCGTGGA 102418 ||| || || ||||| || ||||||| Sbjct 26 ACCTATTAGTGCAAAAGCCCCGTGGA 1 >seq20701 Length=725 Score = 111 bits (122), Expect = 2e-19 Identities = 167/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 101777 CCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTCTCGAACT 101836 ||| ||| ||| | | | | ||||| || || || || |||||||| | ||| || | Sbjct 491 CCATCCACGCATGAATAACCTCATTTAAAGTAATATTTTTGGTGTAGAAAGCCTCAAATT 550 Query 101837 CTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGGTTGAGAG 101896 | ||||||| ||||| | || || | ||| ||||||||||| ||||| | ||| |||| Sbjct 551 CACGATCTTCCGCTGCACACATTTCCTAGGAAACAAAGTCATAGGCACGTAAGTTTAGAG 610 Query 101897 CAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAAGAGCATAA 101956 | | |||| || || || ||| | || | ||| || |||| || ||| || |||| Sbjct 611 CCAAGCCAACTATGCCAATATCACTCATACATAAACCGATGACAGTAA-AAATAGGATAA 669 Query 101957 AGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCAGAA 102011 ||||||| ||||| | ||||| ||| || | |||||||||| ||||| || Sbjct 670 AGAAATGTAACCAACGTTTATT-GGAAAAAAAACATCAAAGATTTGGGACCAAAA 723 >seq263076 Length=554 Score = 109 bits (120), Expect = 7e-19 Identities = 208/306 (68%), Gaps = 6/306 (2%) Strand=Plus/Plus Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCG 101769 ||||| || || | ||| | ||||| ||||| |||| || |||||||| || ||||| Sbjct 250 AGAGCATTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGATTTTCATGAGGCTGATCC 309 Query 101770 ACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGT-GTAGAACGT 101828 ||||||| | | ||||| | || |||||||| || || |||| |||||| || Sbjct 310 TGAGGTGCCATCTACGCACGAATACTCTCATTCAAATAAATATTTTTTGGAGTAGAAAGT 369 Query 101829 CTCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAG 101888 ||| || || |||||||| | ||| | ||| |||| ||||| | Sbjct 370 CTCAAATTCAGGATCTTCCGTTGCACGGATNNNNNNNNNNNNNNNNNCATAGGCACGTAA 429 Query 101889 GTTGAGAGC-AAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAA 101947 ||| ||||| ||||| | || | || || || | |||| | || | ||| |||| Sbjct 430 GTTCAGAGCCAAGACAACTA-TGCCAATATAAGTCATCCATAAACTAGTGACAATTACAA 488 Query 101948 AGAGCATAAAGAAATGCAACCACCTCTTATT--ACTAAATGCAATACCAAAGATTTGAGA 102005 | |||||||| ||||| ||||| ||||| | |||| || |||||||||||| || Sbjct 489 ATAGCATAAATAAATGTAACCAAGGTTTATTGGAAAAAAT-CATCACCAAAGATTTGGGA 547 Query 102006 CCAGAA 102011 ||| || Sbjct 548 CCAAAA 553 >seq143040 Length=3997 Score = 102 bits (112), Expect = 1e-16 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 102136 AGCAGTGCTCCTCCCAGGATACCTGCAACACCCATCATATGGAATGGGTTGAGCGTCCAG 102195 ||||| || | || | || || ||||| ||||||||||| |||||||| | |||||| Sbjct 3702 AGCAGAGCCGCGCCTAATATTCCGGCAACTCCCATCATATGAAATGGGTTCAACGTCCAA 3761 Query 102196 TTATGGAAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAAACGAGGGC 102255 ||||| || || || | ||| || | ||||| ||||||||| | || ||||| | Sbjct 3762 TTATGAAATCCTTGGAAGAAAAGGATGAATCAAAATATCGCCGTTACGCCAAAACTCAGT 3821 Query 102256 GCAAAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACAC 102299 ||||||||||||| || || || || ||||| || || || || Sbjct 3822 GCAAAGAACCAACCAGATTGCCCCAGTGGATAAATAAGGAATAC 3865 >seq2075000 Length=209 Score = 96.9 bits (106), Expect = 4e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 102202 AAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAAACGAGGGCGCAAAG 102261 || || || | ||| || | ||||| |||||||||||| ||| ||| ||||||||| Sbjct 2 AATCCTTGGAAGAAAAGAATGAATCAAAATATCGCTGCTACATGAAAACTCGGCGCAAAG 61 Query 102262 AACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAAAAACAGCGATAGGC 102321 |||||||| || || || || ||||| | || || | | | |||||| || || Sbjct 62 AACCAACTAGATTGCCCTAGTGGATAACTAAGGAATAAAGAAATGAAAACAAAAATTGGA 121 Query 102322 CCAGAGAACGCAATAGCATTGTACGGACGAATTCCAATTAACCTAGCCAACTCGAATTGA 102381 |||||||| | || ||||| || || || | | || ||| ||| | || ||||| Sbjct 122 CCAGAGAATGAGATTGCATTATAAGGCCGCAATTGAACAGACCGAGCAAGTTCAAATTGG 181 Query 102382 CGAAGCATGAAACCAATGAGGGCAAA 102407 || | ||||||||| || || ||||| Sbjct 182 CGTAACATGAAACCTATTAGTGCAAA 207 >seq1972347 Length=213 Score = 95.1 bits (104), Expect = 1e-14 Identities = 86/107 (80%), Gaps = 1/107 (1%) Strand=Plus/Minus Query 101803 AATAGGATGTTCTTTGTGTAGAACGTCTCGAACTCTGGATCTTCTGCTGCTCTGATCTCT 101862 || || || || || |||||||| |||||||| || |||||||| ||||| | ||| || Sbjct 211 AAAAGAATATTTTTGGTGTAGAAAGTCTCGAATTCAGGATCTTCCGCTGCACGGATTTCC 152 Query 101863 TGGGATACAAAGTCATAAGCACGAAGGTTGAGAG-CAAGACCAATAA 101908 ||||| ||||||||||| ||||| | ||| |||| |||||| | ||| Sbjct 151 TGGGAAACAAAGTCATAGGCACGTAAGTTCAGAGCCAAGACAACTAA 105 >seq272447 Length=1912 Score = 86.0 bits (94), Expect = 8e-12 Identities = 209/317 (66%), Gaps = 0/317 (0%) Strand=Plus/Minus Query 101797 TCATTCAATAGGATGTTCTTTGTGTAGAACGTCTCGAACTCTGGATCTTCTGCTGCTCTG 101856 ||||| || | || || || ||||||| ||| ||| ||||||| || ||| Sbjct 1039 TCATTTAAAATAATATTTTTGATGTAGAAAATCTTGAATGTAGGATCTTTTGTTGCCTAA 980 Query 101857 ATCTCTTGGGATACAAAGTCATAAGCACGAAGGTTGAGAGCAAGACCAATAATACCGATG 101916 || || | ||| | |||||||| || | | ||| ||||| | |||| | | || Sbjct 979 ATTTCCTTGGAAATAAAGTCATGGACATGTAAGTTCAGAGCCAAGCCAACTACGTCAATA 920 Query 101917 GAACTTGTCCACAGACCCATAACAGGAACAAAGAGCATAAAGAAATGCAACCACCTCTTA 101976 ||| | || | | | | | || | || | ||||||||||| ||||| | ||| Sbjct 919 ACACTCATTCATAAATCATTGAAGGGTAAGAATATCATAAAGAAATATAACCAGCGTTTA 860 Query 101977 TTACTAAATGCAATACCAAAGATTTGAGACCAGAAACGGTTTGCTGTAACCATTGAATAA 102036 || ||| |||| ||||| |||||| ||||| ||||||| || || | || |||||| Sbjct 859 TTGGAAAAAGCAACACCAATGATTTGGGACCAATAACGGTTAGCAGTGATCACCGAATAA 800 Query 102037 GTCTCTTCCTCTTGTGTGGAATCGAATGCTTTGAAAGTGTTTGCTTGATCACCATCTTCA 102096 || ||||| |||| || | | || || ||| || ||||| |||| | || | | Sbjct 799 GTTTCTTCAACTTGAGTTGGTTTAAAAGCGCGGAAGGTATTTGCACCATCATCGTCCTAA 740 Query 102097 TACAGAGTGTTCTCCAC 102113 | | |||||| || || Sbjct 739 AATATAGTGTTTTCTAC 723 >seq56660 Length=239 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 108518 TGGGCGATGAGGGAATCGAACCCCCGACCCTCTCCGTGTAAAGGAGGTGCGCTACCGCTG 108577 |||| | |||||| ||||||||||||||||||||||||||||||| || ||||||||| Sbjct 56 TGGGTGCTGAGGGTTTCGAACCCCCGACCCTCTCCGTGTAAAGGAGACGCTCTACCGCTG 115 Query 108578 CGCTAATCGCCC 108589 ||||| | ||| Sbjct 116 AGCTAAGCCCCC 127 >seq780762 Length=275 Score = 82.4 bits (90), Expect = 9e-11 Identities = 71/88 (81%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 103170 CAGCAGCAAGGTCAAGGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCA 103229 ||||||| | ||| || |||||||||||||| ||||| |||||||| ||||||||||| | Sbjct 187 CAGCAGCTAAGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAA 246 Query 103230 GACCAGCGCGGTTGAGAACGTCTGCCCA 103257 | ||| ||||||| | || ||||| Sbjct 247 GGTTAGCACGGTTGATGATATCAGCCCA 274 >seq542521 Length=235 Score = 82.4 bits (90), Expect = 9e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 102463 AAATCTCCTTGAGCTTCAGGACCCCAAAGTAGAAGAAGAGAATGACCCATAGAGTCAGCA 102522 ||||| |||| ||||| || ||||| ||||| | | ||| || | | | | ||| Sbjct 219 AAATCCCCTTATGCTTCTGGCCCCCATAGTAGCAACAAAGAGTGTGCTAAACTATTGGCA 160 Query 102523 GGCGTTGACACAGCAGCTGTAAGGAAATTAGCACCTTCAAGGTAACTAGACGCAAGCCCG 102582 || || || || || | || | ||||||| | ||| | || | | | || Sbjct 159 GGGGTAGAAACTGCTGTGGTTAAGAAATTACATCATTCCAAATATGAACTTTCCAATCCA 100 Query 102583 TGGGTATACCAGGAAGTAGCAAACGTCGTGCCAGTAAGCCAGCCCCCAATTGCGAGATAA 102642 ||||||||||| ||||| |||| || || || |||| ||| ||||| | |||| |||| Sbjct 99 TGGGTATACCAAGAAGTTACAAAAGTTGTCCCTGTAAACCAACCCCCTAAAGCGAAATAA 40 Query 102643 GCAGTGGGAAAAAGAAGTAGTCCAGACCAACCCACAAA 102680 ||| ||||| || | ||| |||||||| || ||||| Sbjct 39 GCACAAGGAAAGAGCAATAGGCCAGACCATCCTACAAA 2 >seq124049 Length=9620 Score = 82.4 bits (90), Expect = 9e-11 Identities = 228/345 (66%), Gaps = 5/345 (1%) Strand=Plus/Minus Query 102068 TGAAAG-TGTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGG 102126 |||||| | ||||| |||| |||| | | | |||||||| || | || | || || Sbjct 9596 TGAAAGGTATTTGCACCATCATCATCCTAAAATAGAGTGTTTTCTAGGTTG-CTCCATGA 9538 Query 102127 ATTGCTGACAGCAGTGCTCCTCCC-AGGATACCTGCAACACCCATCATATGGAATGGGTT 102185 || || | || || ||| | || | | || |||| ||||||||||| ||||||| Sbjct 9537 ATAGCGCATAGAAGA-CTCATGCCTAATACTCCGGCAAATCCCATCATATGAAATGGGTA 9479 Query 102186 GAGCGTCCAGTTATGGAAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACC 102245 | | ||| ||||| || || || | ||| || | ||||| || |||| || | || Sbjct 9478 CAACTCCCA-TTATGAAATCCTTGGAAGAAAAGGATGAATCAAAGTATCATTGTTGCGCC 9420 Query 102246 AAACGAGGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGAC 102305 ||| ||||||||||| ||| || || || || ||| | || || || ||| | Sbjct 9419 AAAACTCAGCGCAAAGAACTAACCAGATTGCCCCAGTGGACAAATAAGGAATACAGAAGC 9360 Query 102306 AAAAACAGCGATAGGCCCAGAGAACGCAATAGCATTGTACGGACGAATTCCAATTAACCT 102365 |||| | | || || |||||||| | || ||||| || || | | | || ||| Sbjct 9359 AAAAGTAACAATTGGACCAGAGAATGAGATTGCATTATAAGGTTGCAATTGAACAGACCG 9300 Query 102366 AGCCAACTCGAATTGACGAAGCATGAAACCAATGAGGGCAAATGC 102410 ||| | || ||||| ||||||||| || || | ||| || Sbjct 9299 AGCAAGTTCAAATTGNNNNNNCATGAAACCTATTAGTGTAAAAGC 9255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 617058868213080