Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq900588 592 2e-164 seq94777 511 6e-140 seq174834 194 2e-44 seq747441 138 1e-27 seq143040 134 2e-26 seq2075000 129 8e-25 seq124049 122 1e-22 seq18775 91.5 2e-13 >seq900588 Length=4557 Score = 592 bits (656), Expect = 2e-164 Identities = 716/972 (74%), Gaps = 2/972 (0%) Strand=Plus/Minus Query 26725 TCAGCAGCAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAAT 26784 ||| ||||||| | || | || || || || || || | |||||| || || || | Sbjct 3991 TCAACAGCAGCTAAGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATA 3932 Query 26785 CCAAGACCAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCA 26844 ||||| ||||||||||| | || |||||||| || | || ||||| || |||| Sbjct 3931 CCAAGGTTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCA 3872 Query 26845 ATCACAGACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGT 26904 | ||||| || ||||| |||||||| || || ||||||||||| || | ||| | Sbjct 3871 ACTACAGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACCTAAA 3812 Query 26905 GCGGTGAACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAG 26964 || ||||||||||| || || || ||||| ||||| | ||||||||| || ||||| ||| Sbjct 3811 GCAGTGAACCAGATTCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAG 3752 Query 26965 TTGTTGAATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATG 27024 |||||||| ||||||||||||||| || || || || || ||||| || || || || Sbjct 3751 TTGTTGAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATA 3692 Query 27025 TTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTC 27084 || || |||||||| |||||||| || || ||||| | || || ||| ||||||| Sbjct 3691 TTATAAGTCTCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTA 3632 Query 27085 GTCTCACGGACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCA 27144 || || | || | ||| || |||| || ||||||||| ||| || || || Sbjct 3631 GTTTCCCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCG 3572 Query 27145 CCGAATACCCCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCC 27204 |||||||| ||||| ||||| | ||||||||| || ||||||||||| ||||| |||||| Sbjct 3571 CCGAATACACCAGCTACACCTAACATGTGGAATGGATGCATAAGGATGTTGTGCTCTGCC 3512 Query 27205 TGGAATACAAGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAA 27264 |||||||||| ||| |||| |||||||||||||| || | ||||||| |||| || || Sbjct 3511 TGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAAAGGCATACCATCAGAAAAG 3452 Query 27265 GAACCTTGACCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAA 27324 |||||||| | ||| || | | ||| || ||| | ||||| || || ||||| ||| Sbjct 3451 CTTCCTTGACCAATAGGGTAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAA 3392 Query 27325 TATGCTACACAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCACTCACGTCCC 27384 ||||| ||| ||||| ||||||||||| | ||| | |||||||||||||| ||| Sbjct 3391 TATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCC 3332 Query 27385 ATATAAGCATAGATGCCGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACCGTTA 27444 |||||| | | || | | |||||| | || | || | |||||||||| || Sbjct 3331 ATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTG 3272 Query 27445 TACAACCACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTGCA 27504 || ||||||||||| | ||||| |||||||| |||||||| ||||| | ||||| || Sbjct 3271 TATAACCACTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATCGCC 3212 Query 27505 TTTGAACTTGGGACAACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAGCA 27564 ||| | || | || |||||||| || || ||||| ||||| | | ||||||| | Sbjct 3211 GCAGAAGTAGGAATAATAGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAA 3152 Query 27565 ACGGGTTCACGAATACCGTCAATATCGACGGGTGGTGCTGCGATGAATGCGACAATGAA- 27623 || || || |||||||| |||||||| || || || || |||||||| |||| ||| || Sbjct 3151 ACAGGCTCGCGAATACCATCAATATCTACTGGAGGGGCAGCGATGAAGGCGATAATAAAT 3092 Query 27624 GCAGACAGTTGCTGCTAACAGTGTTGGGATCATCAGTACACCGAACCAACCAACATACAA 27683 |||| |||||| | || | || |||||||||| ||||||||||| || | || | Sbjct 3091 ACAGA-AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAG 3033 Query 27684 ACGGTTGTTAGT 27695 ||| || | ||| Sbjct 3032 ACGATTTTCAGT 3021 >seq94777 Length=2712 Score = 511 bits (566), Expect = 6e-140 Identities = 725/1013 (72%), Gaps = 10/1013 (1%) Strand=Plus/Minus Query 23386 ATCAAAGAGCATTACCTCTTGGAAGGATTTCCTCA---ATTACAGGAAAGTTTTCGTGTG 23442 || ||||||| || || | ||| || | |||||| | || | || ||||| || | Sbjct 2083 ATTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGA---TTTTCATGAG 2027 Query 23443 GTTGGTCAATAGTCATCATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGT 23502 | || || || |||||| |||| | || | ||| || | ||||||||| |||| Sbjct 2026 GCTGATCCTGAGCTGCCATCCACGCACGAATACCCTCGTTTAAAAGAATATTTTTGGTGT 1967 Query 23503 AGAAGGTCTCATACGAACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAG 23562 |||| ||||| | | |||||| || ||||| || || || ||||| ||||| | Sbjct 1966 AGAAAGTCTCGAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACAAAGTCATAGG 1907 Query 23563 CACGAAGATTAAGAGCAAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAG 23622 |||| | || ||||| | |||| | |||||||| | | ||| | ||| |||| | Sbjct 1906 CACGTAAGTTCAGAGCCAAGCCAACTACGCCAATAGCACTCATCCATAAACCGGTGACGG 1847 Query 23623 GAACAAACAACATAAAGAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTT 23682 | ||||| | ||||||||| || |||||||| |||||| ||| ||||| || ||||||| Sbjct 1846 GTACAAATAGCATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACACCAAAGATTT 1787 Query 23683 GTGACCAAAAACGATTTGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCGA 23742 | |||||||| || || || || ||||| ||||| || || || | ||||| | | | Sbjct 1786 GGGACCAAAAGCGGTTAGCAGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAA 1727 Query 23743 ACGCTTTAAAAGTGTTTGCCTGTTCTCCATCTTCATACAGTGTATTCTCGACAGTAACTC 23802 | || || || ||||| || || || ||| | || || || || || || ||| Sbjct 1726 AAGCACGGAAGGTATTTGCACCATCACCGTCCTCAAATAGAGTGTTTTCTACGGTTGCTC 1667 Query 23803 CATGAATAGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGAAGG 23862 |||||||||| | || || || | || | || || ||||||||||||||||| || | Sbjct 1666 CATGAATAGCGCATAGCAGAGCCGCGCCTAATACTCCGGCAACTCCCATCATATGAAATG 1607 Query 23863 GGTTGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAA 23922 |||| | |||||| |||||||| || |||| ||| || | ||| | || ||||| || | Sbjct 1606 GGTTCAACGTCCAATTATGAAATCCTTGGAAGAAAAGGATGAATCGAAATATCGCTGCTA 1547 Query 23923 CACCGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACAG 23982 | || ||||||||||||||||||||| || || |||| ||||| || |||||||| | Sbjct 1546 CGCCAAAACTCGGCGCAAAGAACCAACCAGATTGCCCCAGTGGATAAATAAGGAATACCG 1487 Query 23983 ACACGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTA 24042 | || || |||||||| |||||||| || | || ||||| || || || | | || | Sbjct 1486 AAACAAAAACAGCAATTGGACCAGAGAATGAGATTGCATTATAAGGCCGCAATTGAAC-A 1428 Query 24043 GAC-GTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGA 24101 ||| | || |||||||| || |||||||| |||||||| |||||||| || ||||||||| Sbjct 1427 GACCGAGCAAGTTCAAATTGGCGTAACATGAAACCTATTAGTGCAAAAGCCCCGTGGAGA 1368 Query 24102 GCAACAAAGGACCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACTCA 24161 || ||||| | ||| || || || | ||| ||| || ||| || ||||| | || Sbjct 1367 GCTACAAAAGTCCATAGACCGCCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCT 1308 Query 24162 GGACCCCAAAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGCC 24221 || ||||| ||||| | | ||| || | | | | ||||| || || || ||||| Sbjct 1307 GGCCCCCATAGTAGCAACAAAGAGTGTGCTAAACTATTGGCAGGGGTAGAAACTGCTGCG 1248 Query 24222 G-TAAGAAAGTTAGCACCCTCAAGATAGGAACTAGCAAGTCCATGGGTGTACCAACTCGT 24280 | ||||||| ||| ||| || | ||||||||| || | ||||||||| |||||| || Sbjct 1247 GTTAAGAAA-TTACAACCTTCCAAATAGGAACTTGCCAATCCATGGGTATACCAAGAAGT 1189 Query 24281 AACAAAAGCTGTGCCAGTAAGCCAACCGCCAATGGCAAGATAAGCAGTGGGAAGAAGTAG 24340 ||||||| ||| || |||| |||||| || | || | ||||||| |||| || | Sbjct 1188 TACAAAAGTTGTCCCTGTAAACCAACCCCCTAAAGCGAAATAAGCACAAGGAAAGAGCAA 1129 Query 24341 GAGTCCAGACCAACCCACAAAGACAAAGCGATCCCGTTTAACCCAGTCGTCCA 24393 || |||||||| || ||||| || || || |||| | | |||||| |||| Sbjct 1128 TAGGCCAGACCATCCTACAAAAACGAAACGGTCCCTTCGTAACCAGTCATCCA 1076 >seq174834 Length=1002 Score = 194 bits (214), Expect = 2e-44 Identities = 409/599 (68%), Gaps = 11/599 (2%) Strand=Plus/Plus Query 23800 CTCCATGAATAGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGA 23859 |||||||||||| | |||| || | || | || || |||| |||||||||||| | Sbjct 33 CTCCATGAATAGTGCATAGAAAAGCCACGCCTAATACTCCGGCAAATCCCATCATATGAA 92 Query 23860 AGGGGTTGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCG 23919 | | || | |||||| |||||||| || |||| ||| || | ||| | || || || | Sbjct 93 ATAGATTCAACGTCCAATTATGAAATCCTTGGAAGAAAAGGATGAATCGAAATATTGCTG 152 Query 23920 CAACACCGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATA 23979 | ||||| |||||||| |||||||||||| | || || | ||||| | || |||| Sbjct 153 CTACACCAAAACTCGGTGCAAAGAACCAACCATATTG-CCGAGTGGATAACTAAGAAATA 211 Query 23980 CAGACACGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAA 24039 |||| || || | |||||| ||||||| || | || ||||| || | | || Sbjct 212 CAGAAACAAAAATAGCAATTAGACCAGAGAATGAGATTGCATTATAANNNNNCAATTGAA 271 Query 24040 TTAGA-CGTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGG 24098 ||| || || |||||| || ||||||| || ||||| |||||||| || |||||| Sbjct 272 -CAGACCGAGCACGTTCAAGTTGGTGTAACATGAACCCTATTAGTGCAAAAGC-CCGTGG 329 Query 24099 AGAGCAACAAAGGACCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGAC 24158 || || ||||| | ||| || || || | ||| ||| || ||| || | || | Sbjct 330 AGTGCTACAAAAGTCCATAGACCGCCTAATTGACACCAACGACTAAAATCTACATGTGCT 389 Query 24159 TCAGGACCCCAAAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCT 24218 || || ||||| ||||| | | ||| || | | | | ||| || || | | Sbjct 390 TCTGGCCCCCATAGTAGCAACAAAGAGTGTGCTAAACTATTGGCAAAGGTAGAAATTGTC 449 Query 24219 GCCG-TAAGAAAGTTAGCACCCTC-AAGATAGGAACTAGCAAGTCCATGGGTGTACCAAC 24276 || | ||||||| ||| || |||| | ||||||||| || |||||||| || ||| || Sbjct 450 GCTGTTAAGAAA-TTA-CAACCTCGCAAATAGGAACTTGCCAGTCCATGAGTATACAAAG 507 Query 24277 TCGTAACAAAAGCTGTGCCAGT--AAGCCAACCGCCAATGGCAAGATAAGCAGTGGGAAG 24334 || ||| ||| ||| || || || |||||| | || | || ||||||| |||| Sbjct 508 AAGTTACATAAGTTGTTCCTGTAAAAACCAACCCCTAAAGAGAA-ATAAGCATAAGGAAA 566 Query 24335 AAGTAGGAGTCCAGACCAACCCACAAAGACAAAGCGATCCCGTTTAACCCAGTCGTCCA 24393 || | || ||| |||| || ||||| | || || ||| | | |||||| |||| Sbjct 567 GAGCAATAGGCCATACCATCCTACAAAAATGAAACGGCCCCTTCGTAACCAGTCATCCA 625 >seq747441 Length=209 Score = 138 bits (152), Expect = 1e-27 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 23891 GAGGAAGAGAAGGAACCTGAAAATCGCCGCAACACCGAAACTCGGCGCAAAGAACCAAGA 23950 || ||| || | ||| | || ||||| || || || ||||||||||||||||||||| Sbjct 209 GAAGAAAAGGATGAATCGAAATATCGCTGCTACGCCAAAACTCGGCGCAAAGAACCAACC 150 Query 23951 TGACTGTCCCAAAGGATAGATGAGGAATACAGACACGAATACAGCAATAGGACCAGAAAA 24010 || || |||| ||||| || |||||||| || || || ||| ||| |||| ||| || Sbjct 149 AGATTGCCCCAGTGGATAAATAAGGAATACCGAAACAAAAACAAAAATTGGACGAGAGAA 90 Query 24011 AGCAATCGCATTGTAGGGACGGATTCCAATTAGA-CGTGCCAGTTCAAACTGACGTAACA 24069 | || ||||| || || || | | || ||| || || |||||||| || ||||||| Sbjct 89 TGAGATTGCATTATAAGGCCGCAATTGAA-CAGACCGAGCAAGTTCAAATTGGCGTAACA 31 Query 24070 TAAAACCTATAAGTGCAAAGGCACCGTGGA 24099 | |||||||| |||||||| || ||||||| Sbjct 30 TGAAACCTATTAGTGCAAAAGCCCCGTGGA 1 >seq143040 Length=3997 Score = 134 bits (148), Expect = 2e-26 Identities = 140/184 (76%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 23800 CTCCATGAATAGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGA 23859 ||||||||||||| || || || | || | ||| || ||||||||||||||||| | Sbjct 3685 CTCCATGAATAGCGCGTAGCAGAGCCGCGCCTAATATTCCGGCAACTCCCATCATATGAA 3744 Query 23860 AGGGGTTGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCG 23919 | ||||| | |||||| |||||||| || |||| ||| || | ||| | || ||||||| Sbjct 3745 ATGGGTTCAACGTCCAATTATGAAATCCTTGGAAGAAAAGGATGAATCAAAATATCGCCG 3804 Query 23920 CAACACCGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATA 23979 || || |||||| | |||||||||||| || || |||| ||||| || ||||||| Sbjct 3805 TTACGCCAAAACTCAGTGCAAAGAACCAACCAGATTGCCCCAGTGGATAAATAAGGAATA 3864 Query 23980 CAGA 23983 | || Sbjct 3865 CCGA 3868 >seq2075000 Length=209 Score = 129 bits (142), Expect = 8e-25 Identities = 155/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 23882 AAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAACACCGAAACTCGGCGCAAA 23941 ||| || |||| ||| |||| ||| | || ||||| || ||| |||||||||||||| Sbjct 1 AAATCCTTGGAAGAAAAGAATGAATCAAAATATCGCTGCTACATGAAAACTCGGCGCAAA 60 Query 23942 GAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACAGACACGAATACAGCAATAGG 24001 ||||||| || || || | ||||| | ||||||| ||| | ||| ||| ||| || Sbjct 61 GAACCAACTAGATTGCCCTAGTGGATAACTAAGGAATAAAGAAATGAAAACAAAAATTGG 120 Query 24002 ACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGA-CGTGCCAGTTCAAACT 24060 |||||| || | || ||||| || || || | | || ||| || || |||||||| | Sbjct 121 ACCAGAGAATGAGATTGCATTATAAGGCCGCAATTGAA-CAGACCGAGCAAGTTCAAATT 179 Query 24061 GACGTAACATAAAACCTATAAGTGCAAA 24088 | |||||||| |||||||| |||||||| Sbjct 180 GGCGTAACATGAAACCTATTAGTGCAAA 207 >seq124049 Length=9620 Score = 122 bits (134), Expect = 1e-22 Identities = 222/321 (69%), Gaps = 16/321 (5%) Strand=Plus/Minus Query 23777 ATACAGTGTATTCTCGACAGTAACTCCATGAATAGCAGAGAGAAGTGCTCCTCCC-AGTA 23835 ||| ||||| |||| | || ||||||||||||| | ||||| ||| | || | || Sbjct 9565 ATAGAGTGTTTTCTAG---GTTGCTCCATGAATAGCGCATAGAAGA-CTCATGCCTAATA 9510 Query 23836 TACCAGCAACTCCCATCATATGGAAGGGGTTGAGCGTCCAGTTATGAAAGCCCTGGAGGA 23895 || |||| |||||||||||| || |||| | | ||| |||||||| || |||| || Sbjct 9509 CTCCGGCAAATCCCATCATATGAAATGGGTACAACTCCCA-TTATGAAATCCTTGGAAGA 9451 Query 23896 AGAGAAGGAACCTGAAAATCGCCGCAACACCGAAACTCGGCGCAAAGAACCAAGATGACT 23955 | || | ||| | | ||| | | || |||||| ||||||||||| || || | Sbjct 9450 AAAGGATGAATCAAAGTATCATTGTTGCGCCAAAACTCAGCGCAAAGAACTAACCAGATT 9391 Query 23956 GTCCCAAAGGATAGATGAGGAATACAGACACGAATACAGCAATAGGACCAGAAAAAGCAA 24015 | |||| ||| | || ||||||||||| | || | |||| |||||||| || | | Sbjct 9390 GCCCCAGTGGACAAATAAGGAATACAGAAGCAAAAGTAACAATTGGACCAGAGAATGAGA 9331 Query 24016 TCGCATTGTAGGGACGGATTCCAATT----AGA-CGTGCCAGTTCAAACTGACGTAACAT 24070 | ||||| || || || ||||| ||| || || |||||||| || ||| Sbjct 9330 TTGCATTATAAGG-----TTGCAATTGAACAGACCGAGCAAGTTCAAATTGNNNNNNCAT 9276 Query 24071 AAAACCTATAAGTGCAAAGGC 24091 |||||||| |||| ||| || Sbjct 9275 GAAACCTATTAGTGTAAAAGC 9255 >seq18775 Length=1994 Score = 91.5 bits (100), Expect = 2e-13 Identities = 191/285 (67%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 47944 GTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATA 48003 || ||||| || || || || ||||| || || | || ||||| || || || || || Sbjct 1366 GTGATCTTTCGGGTGACGAAGGTTTCGCCGCGGCGCGGGGATTCGTGGTTGAACAGGATG 1307 Query 48004 CCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTACCCATAG 48063 || | ||||||||||| || || | ||| || || || |||||||| | || Sbjct 1306 CCGTTGCAGGCATACATGCCATAGGCTTCGCGGTAATTGACCGTGATCCAGTAGGCGTAC 1247 Query 48064 AGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTC 48123 || || || || | || ||| || ||||||||||| |||||||| ||| || || Sbjct 1246 AGCTTGGCGACCGCGTAGGGACTGCGCGGATAGAAAGGCGTGGTCTCGCGCTGCGGGGTT 1187 Query 48124 TCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATAGATACGAACCCTATCTTCC 48183 || |||||| || || || || || ||||| || |||| || | | | |||| Sbjct 1186 TCCTGCACCAGGCCGTAGAGCTCGGAAGTCGATGCCTGGTAGAAGCGGGTCTTCTTTTCC 1127 Query 48184 ATCTCAAGCAAACGGACTGCCTCAAGCACTCTCAGGGTGCCTATG 48228 | | || || |||| || || |||| | || |||||| ||| Sbjct 1126 AGGCCGAGGAAGCGGATCGCTTCCAGCAGCCGCAAGGTGCCGATG 1082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 648209006509320