Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_021297.1 Length=52057 Score E Sequences producing significant alignments: (Bits) Value seq833769 102 3e-17 >seq833769 Length=269 Score = 102 bits (112), Expect = 3e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 41055 CGTCGAGCGACTTCGGGAACCCGCTGCCGTACAGCCACGCGATCGAGTCGCGGACCTCGA 41114 ||| | | ||||||||||| || |||||| | ||| |||||| |||||||| ||||| Sbjct 51 CGTTGTGTGACTTCGGGAAGCCCGAGCCGTAGACCCAGGCGATCATGTCGCGGATCTCGA 110 Query 41115 ACCCGGCGTCCTCGATCGCCGCCGCCAGCCGGTGCCAGGTGCGCGGGCCGCCGAAGGCGA 41174 | || || |||||||| | |||| || ||| |||||||| ||| ||||||| | Sbjct 111 AACCCGCATCCTCGATGCGAACGGCCATGCGATGCTGGGTGCGCGTGCCTGCGAAGGCCA 170 Query 41175 GCAGGTGCCCACCGGGCTTGAGGACCCGTAGGCACT 41210 | || || || || ||||| || || || ||||||| Sbjct 171 GTAGATGGCCGCCAGGCTTCAGTACGCGCAGGCACT 206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162353367379478