Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_021343.1 Length=35430 Score E Sequences producing significant alignments: (Bits) Value seq50588 89.7 1e-13 >seq50588 Length=314 Score = 89.7 bits (98), Expect = 1e-13 Identities = 129/181 (71%), Gaps = 6/181 (3%) Strand=Plus/Minus Query 9611 AACAGGTTCCGGAAATTACCGATGCCCTTCGAGTCGCGTAACGCCTTCCGGATCGCGTCT 9670 |||||||| |||||||| || || |||||| || | ||| | || | ||||| Sbjct 309 AACAGGTTGCGGAAATTGCCCGGCCCACGCGAGTCCCGCAGCGCTTCACGCAAGGCGTCC 250 Query 9671 ACGTC---GTCCGGGTCCATGTTCGGGTCGTTGAGGTACAGGATGAACCCGGCGTGCGAG 9727 ||||| | || ||| | ||| ||| | | ||| ||||| |||||||| |||||| Sbjct 249 ACGTCCATGCCC---TCCGGCTGCGGATCGGTCATGTAGAGGATAAACCCGGCATGCGAG 193 Query 9728 CCGTTCGCGTAGTAGCGGCGCCGGAACAGGGTGGCGGACTCGTTCAACCACGCGGATTGC 9787 ||||| | |||||| | ||| ||||||| ||||| || ||||| | | ||| || ||| Sbjct 192 CCGTTGGTGTAGTACCTGCGGCGGAACAACGTGGCCGATTCGTTGAGCAGCGCCGACTGC 133 Query 9788 A 9788 | Sbjct 132 A 132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 110459839256704