Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_022068.1 Length=58043 Score E Sequences producing significant alignments: (Bits) Value seq833769 93.3 2e-14 >seq833769 Length=269 Score = 93.3 bits (102), Expect = 2e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 42061 AGTGCCTGCGCGTGCTGAAACCGGGCGGGCACCTGCTCGCGTTCGGCGGTTCGCGCACCT 42120 ||||||||||||| ||||| || ||||| || || || || |||| || |||||||| Sbjct 206 AGTGCCTGCGCGTACTGAAGCCTGGCGGCCATCTACTGGCCTTCGCAGGCACGCGCACCC 147 Query 42121 GGCACCGGCTAGCGGCGGCGATCGAGGACGCCGGGTTCGAGATCCGCGACTCCATCGCCT 42180 ||| || | || | |||||||| || || ||||||||||||||| ||||||| Sbjct 146 AGCATCGCATGGCCGTTCGCATCGAGGATGCGGGTTTCGAGATCCGCGACATGATCGCCT 87 Query 42181 GGCTGTACGGC 42191 || | |||||| Sbjct 86 GGGTCTACGGC 76 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181035911394810