Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_022329.1 Length=53636 Score E Sequences producing significant alignments: (Bits) Value seq833769 93.3 1e-14 >seq833769 Length=269 Score = 93.3 bits (102), Expect = 1e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 41280 CGTCGAGCGACTTCGGGAAACCGCTGCCGTAGAGCCAGGCGATGGAGTCGCGGAGCTCAA 41339 ||| | | ||||||||||| || |||||||| ||||||||| |||||||| ||| | Sbjct 51 CGTTGTGTGACTTCGGGAAGCCCGAGCCGTAGACCCAGGCGATCATGTCGCGGATCTCGA 110 Query 41340 ACCCGGCGTCCTCGATCGCCGCCGCCAGCCGGTGCCAGGTGCGGGAGCCGCCGAAGGCGA 41399 | || || |||||||| | |||| || ||| |||||| | ||| ||||||| | Sbjct 111 AACCCGCATCCTCGATGCGAACGGCCATGCGATGCTGGGTGCGCGTGCCTGCGAAGGCCA 170 Query 41400 GCAGGTACCCACCCGGCTTGAGGACCCGCAGACACT 41435 | || | || || ||||| || || ||||| |||| Sbjct 171 GTAGATGGCCGCCAGGCTTCAGTACGCGCAGGCACT 206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167281489163676