Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq138792 104 2e-17 >seq138792 Length=3226 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| ||||| || || | || ||||| ||||| || | || |||| || Sbjct 79 ATGCAAATCTTTGTAAAGACCCTCACGGGCAAGACCATCACATTGGAGGTGGAGTCTTCG 138 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | | || || |||||| || || |||||| | ||| ||| ||| Sbjct 139 GACACCATCGACAATGTGAAGGCAAAGATCCAGGACAAGGAAGGCATTCCCCCGGACCAG 198 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | ||| ||||| ||||| ||||| | | || |||||||||||||| Sbjct 199 CAGCGTCTCATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGTACCTTGGCGGACTACAAC 258 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 ||||| |||||||| || | ||| ||||| Sbjct 259 ATTCAGAAGGAGTCCACCCTTCACTTGGTG 288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 388775477011789