Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq900588 560 1e-154 seq94777 558 4e-154 seq174834 187 3e-42 seq143040 138 1e-27 seq747441 118 1e-21 seq2075000 114 2e-20 seq263076 114 2e-20 seq219505 91.5 2e-13 seq124049 87.8 2e-12 seq188012 84.2 3e-11 >seq900588 Length=4557 Score = 560 bits (620), Expect = 1e-154 Identities = 726/994 (73%), Gaps = 8/994 (1%) Strand=Plus/Plus Query 177558 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177617 |||||| | ||| ||||| || | || || || || |||| |||||||| || || Sbjct 3000 TTCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTG 3059 Query 177618 ATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCGTCGCTGCTCC 177676 ||||| || || | ||| | |||||| |||| || || |||||||| ||||||| || Sbjct 3060 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 3118 Query 177677 CCCCGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 177736 || || || || || || || || || || || ||||||| | | ||||| ||||| Sbjct 3119 TCCAGTAGATATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAA 3178 Query 177737 CATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 177796 || ||||||||||| || | || |||| || || || | ||||| || || || Sbjct 3179 TATTATCTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 3238 Query 177797 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 177856 |||||||| ||||| ||||||||||| | || || |||||||||| | || | || Sbjct 3239 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 3298 Query 177857 CTTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATACCG 177916 | |||||| | | || | | |||||||| ||||||||||||||| | ||| Sbjct 3299 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 3358 Query 177917 TCTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCACCTGTTGCAGCAGCATCCGC 177976 ||| |||||||| || ||||| ||||||||| || || ||||||||||| || | || Sbjct 3359 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 3418 Query 177977 AGTCTTTCTAG-TCTATCCTTTCGGTCAAGGTTCATTCTCCGATGCTATGCCTCTTGGTA 178035 || ||||| | | || ||| | |||||||| || || |||| ||||||| | || | Sbjct 3419 TGT-TTTCTTGATTTACCCTATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTTTAGGAA 3477 Query 178036 TCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCACC 178095 ||||||||||||| |||| ||| |||||||||| ||||| ||||| ||||||||||| | Sbjct 3478 TCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATC 3537 Query 178096 CGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATG 178155 | ||||||||| | ||||| ||||| |||||||| || || || ||| ||||||||||| Sbjct 3538 CATTCCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 3597 Query 178156 GAAGTCTCGTTACTTCTTCGCTCGTCCGTGAGACGACAGAAACTGAGTCCCAGAACTATG 178215 | | || || ||| | || | || || || |||| ||| || || | | Sbjct 3598 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGG 3657 Query 178216 GTTACAAGTTCGGACAAGAAGAAGAAACATATAACATCGTCGCAGCCCATGGTTACTTCG 178275 ||||||| || || ||||| ||||| || ||||| || || || || |||||||| || | Sbjct 3658 GTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTG 3717 Query 178276 GTCGTTTGATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTGCACTTCTTCCTCG 178335 | || || |||||||||||||| ||||||||||| ||||| | ||||||||| | | Sbjct 3718 GCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGG 3777 Query 178336 CAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTTGGTGTATCCACCATGGCATTTA 178395 | || ||||||||||| |||||||||||||| || | ||| | || ||||| || | Sbjct 3778 CTGCTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 3837 Query 178396 ACCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACA 178455 |||| ||||| ||||| |||||||| || | | || | ||||| || || | || | Sbjct 3838 ACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATA 3897 Query 178456 CATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAAAGAAATA 178515 | ||||| || | |||||||||| || || |||||||| ||||||||| | ||| Sbjct 3898 CTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAACGTAAT- 3956 Query 178516 GCACATAACTTCCCGCTTGATCTTGCAGCAGCTG 178549 || || |||||||| || || ||| ||| |||| Sbjct 3957 GCTCACAACTTCCCTCTAGA-CTT--AGCTGCTG 3987 >seq94777 Length=2712 Score = 558 bits (618), Expect = 4e-154 Identities = 730/1005 (73%), Gaps = 4/1005 (0%) Strand=Plus/Plus Query 178949 TGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179008 ||||||||||| | |||| || || || ||||| || |||||||| || | || Sbjct 1076 TGGATGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCTGGCCTATTGCTCT 1135 Query 179009 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 179068 |||| ||||||| | || | || |||||| |||| |||||| ||||||| || || Sbjct 1136 TTCCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACAACTTTTGTAACTTCTT 1195 Query 179069 GGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGGTGCTAACTTTCTTA-CGGCAGCT 179127 |||| |||||||| | || ||||||||| | |||||| ||| ||||||| | ||||| Sbjct 1196 GGTATACCCATGGATTGGCAAGTTCCTATTTGGAAGGTTGTAA-TTTCTTAACCGCAGCA 1254 Query 179128 GTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 179187 || || || ||||| || | | | || ||| | | ||||| ||||| || || | Sbjct 1255 GTTTCTACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGGCCAGAAGCA 1314 Query 179188 CAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCAC 179247 || || |||| || ||||| ||| | || || ||||||| ||| || ||||||||| Sbjct 1315 CAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTATGGACTTTTGTAGCTCTCCAC 1374 Query 179248 GGTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGG 179306 || || || || ||||| || |||||| | || || |||||||| || || ||| || Sbjct 1375 GGGGCTTTTGCACTAATAGGTTTCATGTTACGCCAATTTGAACTTGCTCGGTCTGTTCAA 1434 Query 179307 TATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGTATTCGTTAGTGTATT 179366 | | || ||||| ||||| || | || ||||||| ||||| || || ||| ||||| Sbjct 1435 T-TGCGGCCTTATAATGCAATCTCATTCTCTGGTCCAATTGCTGTTTTTGTTTCGGTATT 1493 Query 179367 TCTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATCGTTTGGTGTTGCGGC 179426 || || || ||||| || ||||| |||||||||||||||| ||||| || || || Sbjct 1494 CCTTATTTATCCACTGGGGCAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGC 1553 Query 179427 GATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGACACTCAACCCCTTTCA 179486 ||| ||| ||||| | |||||||| ||||| || || || ||||| | ||||| ||||| Sbjct 1554 GATATTTCGATTCATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCA 1613 Query 179487 CATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGCTATTCATGGAGTAAC 179546 |||||||||||||| || | | || | |||||||| | ||||||||||||| ||| Sbjct 1614 TATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGAGCAAC 1673 Query 179547 TGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTTAAAGCGTTCGACTC 179606 ||||| || || | | ||| || || || ||||| || || || || || | Sbjct 1674 CGTAGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGTGCTTTTAACCC 1733 Query 179607 TACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTTTTGGTCGCAGATCTT 179666 || |||| || || || ||||| ||||| || || ||||| |||||||| || ||||| Sbjct 1734 AACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTT 1793 Query 179667 CGGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGTTCCTGTCAT 179726 || ||| | ||| |||||| |||||||| || ||||||| ||| ||||| || |||| Sbjct 1794 TGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCAC 1853 Query 179727 GGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCTTCGTGCTTATGA 179786 ||| | ||| | | |||||||| | |||| | ||||| || | ||||| ||||| Sbjct 1854 CGGTTTATGGATGAGTGCTATTGGCGTAGTTGGCTTGGCTCTGAACTTACGTGCCTATGA 1913 Query 179787 TTTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTATACAAA 179846 ||||| || || ||| | ||||| ||||||||||| |||||||| ||||| || || Sbjct 1914 CTTTGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTCGAGACTTTCTACACCAA 1973 Query 179847 GAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCACATGA 179906 || |||||| | || || || | ||||| ||| ||||| || ||||| || ||||| Sbjct 1974 AAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGA 2033 Query 179907 AAACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAACGCACT 179951 ||| | || ||||| || || || ||||| |||| ||||| || Sbjct 2034 AAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 2078 >seq174834 Length=1002 Score = 187 bits (206), Expect = 3e-42 Identities = 407/601 (68%), Gaps = 9/601 (1%) Strand=Plus/Minus Query 178949 TGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179008 ||||||||||| | ||| || || | ||||| || |||| ||| || | || Sbjct 625 TGGATGACTGGTTACGAAGGGGCCGTTTCATTTTTGTAGGATGGTATGGCCTATTGCTCT 566 Query 179009 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTT--ACTGGGACAGCTTTTGTTACGAG 179066 |||| ||||||| || | || | |||||| || || || ||| ||| ||| || Sbjct 565 TTCCTTATGCTTAT-TTCTCTTTAGGGGTTGGTTTTTACAGGAACAACTTATGTAACTTC 507 Query 179067 TTGGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGGTGCTAACTTTCTTA-CGGCAG 179125 || ||| || ||||| || || ||||||||| | |||| ||| ||||||| | || Sbjct 506 TTTGTATACTCATGGACTGGCAAGTTCCTATTTGCGAGGTTGTAA-TTTCTTAACAGCGA 448 Query 179126 CTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGT 179185 | | || || ||| || | | | || ||| | | ||||| ||||| || || Sbjct 447 CAATTTCTACCTTTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGGCCAGAAG 388 Query 179186 CTCAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCC 179245 | || | |||| || ||||| ||| | || || ||||||| ||| || || |||| Sbjct 387 CACATGTAGATTTTAGTCGTTGGTGTCAATTAGGCGGTCTATGGACTTTTGTAGCACTCC 328 Query 179246 ACGGTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATC 179304 |||| || || || ||||| || |||||| | | || |||||| || || ||| || Sbjct 327 ACGG-GCTTTTGCACTAATAGGGTTCATGTTACACCAACTTGAACGTGCTCGGTCTGTTC 269 Query 179305 GGTATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGTATTCGTTAGTGTA 179364 | | ||| ||||| || | || |||||| ||||| | || ||| |||| Sbjct 268 AAT-TGNNNNNTTATAATGCAATCTCATTCTCTGGTCTAATTGCTATTTTTGTTTCTGTA 210 Query 179365 TTTCTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATCGTTTGGTGTTGCG 179424 ||||| | || ||||| || |||| ||||||||||||| || |||||||| || Sbjct 209 TTTCTTAGTTATCCACTCGG-CAATATGGTTGGTTCTTTGCACCGAGTTTTGGTGTAGCA 151 Query 179425 GCGATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGACACTCAACCCCTTT 179484 || || ||| ||||| | |||||||| ||||| || || || ||||| | || | ||| Sbjct 150 GCAATATTTCGATTCATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAATCTATTT 91 Query 179485 CACATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGCTATTCATGGAGTA 179544 || ||||||||| |||| || | | || | ||| | || | |||||||||||| | Sbjct 90 CATATGATGGGATTTGCCGGAGTATTAGGCGTGGCTTTTCTATGCACTATTCATGGAGCA 31 Query 179545 A 179545 | Sbjct 30 A 30 >seq143040 Length=3997 Score = 138 bits (152), Expect = 1e-27 Identities = 147/194 (76%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 179362 GTATTTCTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATCGTTTGGTGTT 179421 ||||| || || || ||||| || ||||| ||||||||||||| | ||||| || Sbjct 3865 GTATTCCTTATTTATCCACTGGGGCAATCTGGTTGGTTCTTTGCACTGAGTTTTGGCGTA 3806 Query 179422 GCGGCGATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGACACTCAACCCC 179481 ||||||| ||| ||||| | |||||||| ||||| || || || ||||| | ||||| Sbjct 3805 ACGGCGATATTTTGATTCATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCA 3746 Query 179482 TTTCACATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGCTATTCATGGA 179541 ||||| |||||||||||||| || || | || | |||||||| |||||||||||| Sbjct 3745 TTTCATATGATGGGAGTTGCCGGAATATTAGGCGCGGCTCTGCTACGCGCTATTCATGGA 3686 Query 179542 GTAACTGTAGAGAA 179555 | || ||||| || Sbjct 3685 GCAAACGTAGAAAA 3672 >seq747441 Length=209 Score = 118 bits (130), Expect = 1e-21 Identities = 153/209 (73%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 179243 TCCACGGTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG-TCTC 179301 ||||||| || || || ||||| || |||||| | || || |||||||| || || ||| Sbjct 1 TCCACGGGGCTTTTGCACTAATAGGTTTCATGTTACGCCAATTTGAACTTGCTCGGTCTG 60 Query 179302 ATCGGTATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGTATTCGTTAGT 179361 || | | || ||||| ||||| || | || || |||| ||| || || ||| Sbjct 61 TTCAAT-TGCGGCCTTATAATGCAATCTCATTCTCTCGTCCAATTTTTGTTTTTGTTTCG 119 Query 179362 GTATTTCTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATCGTTTGGTGTT 179421 ||||| || || || ||||| || ||||| |||||||||||||||| ||||| || Sbjct 120 GTATTCCTTATTTATCCACTGGGGCAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCGTA 179 Query 179422 GCGGCGATCTTTAGATTCCTACTTTTCTT 179450 || ||||| ||| ||||| | |||||||| Sbjct 180 GCAGCGATATTTCGATTCATCCTTTTCTT 208 >seq2075000 Length=209 Score = 114 bits (126), Expect = 2e-20 Identities = 151/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 179254 TTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGTATCCG 179312 || || ||||| || |||||| | || || |||||||| || || ||| || | | || Sbjct 207 TTTGCACTAATAGGTTTCATGTTACGCCAATTTGAACTTGCTCGGTCTGTTCAAT-TGCG 149 Query 179313 TCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGTATTCGTTAGTGTATTTCTCAT 179372 ||||| ||||| || | || ||||||| ||| || ||| || | |||| || | Sbjct 148 GCCTTATAATGCAATCTCATTCTCTGGTCCAATTTTTGTTTTCATTTCTTTATTCCTTAG 89 Query 179373 CTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATCGTTTGGTGTTGCGGCGATCTT 179432 || ||||| || ||||| ||||||||||||||||| ||| ||| || ||||| || Sbjct 88 TTATCCACTAGGGCAATCTAGTTGGTTCTTTGCGCCGAGTTTTCATGTAGCAGCGATATT 29 Query 179433 TAGATTCCTACTTTTCTTACAAGGTTT 179459 | ||||| | |||||||| ||||| || Sbjct 28 TTGATTCATTCTTTTCTTCCAAGGATT 2 >seq263076 Length=554 Score = 114 bits (126), Expect = 2e-20 Identities = 206/304 (68%), Gaps = 2/304 (1%) Strand=Plus/Minus Query 179650 TTTTGGTCGCAGATCTTCGGGGTTCCGTTTAGC-AATAAGCGTTGGTTCCACTTCTTTAA 179708 |||||||| || ||||| || | | ||| | ||||| | |||||| || || |||| Sbjct 553 TTTTGGTCCCAAATCTTTGGTGATGATTTTTTCCAATAAACCTTGGTTACATTTATTTAT 494 Query 179709 GCTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCT 179768 ||| ||||| ||||| || | ||| | ||| ||||||||| ||| | ||||| Sbjct 493 GCTATTTGTAATTGTCACTAGTTTATGGATGACTTATATTGGCATAGTTGTCTTGGCTCT 434 Query 179769 TAATCTTCGTGCTTATGATTTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTT 179828 || | ||||| |||| ||| | ||| | ||||||||||| || Sbjct 433 GAACTTACGTGCCTATGNNNNNNNNNNNNNNNNNATCCGTGCAACGGAAGATCCTGAATT 374 Query 179829 CGAGACGTTCTA-TACAAAGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCAC 179887 ||||| ||||| | |||| || ||| | ||||||| | | ||||| | | |||||| Sbjct 373 TGAGACTTTCTACTCCAAAAAATATTTATTTGAATGAGAGTATTCGTGCGTAGATGGCAC 314 Query 179888 CTGCTGATCAACCACATGAAAACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAACG 179947 || ||||| || |||||||| | || ||||| || || || ||||| |||| || | Sbjct 313 CTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAATG 254 Query 179948 CACT 179951 | || Sbjct 253 CTCT 250 >seq219505 Length=1904 Score = 91.5 bits (100), Expect = 2e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 179744 CTATTGGCATCATTGGGCTAGCTCTTAATCTTCGTGCTTATGATTTTGTGAGTCAAGAGA 179803 |||||||| | ||||| | || || || | |||| ||||| ||||| | || | Sbjct 1889 CTATTGGCGTAATTGGCTTGGCACTGAACTTATGTGCCTATGACTTTGTTTCCTAGGAAA 1830 Query 179804 TCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTATACAAAGAACATTCTTCTGAATG 179863 || | ||||| ||||||||||| | ||||| || | ||||| || |||||| | || | Sbjct 1829 TCTGTGCAGCGGAAGATCCTGAATATGAGACTTTTGACACAAAAAATATTCTTTTAAACG 1770 Query 179864 AAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCACATGAAAACTTCATCTTCCCAG 179923 | || | |||| ||| ||| | | | |||||||| |||||||| | || ||||| | Sbjct 1769 AGGGTATTCGTGTGTGGATGGAAGCCGAGGATCAACCTCATGAAAATCTTATATTCCCTG 1710 Query 179924 AAGAAGTCCTACCTAGTGGTAAC 179946 | || | || || |||| ||| Sbjct 1709 AGGAGGCTCTGCCACGTGGAAAC 1687 >seq124049 Length=9620 Score = 87.8 bits (96), Expect = 2e-12 Identities = 212/317 (67%), Gaps = 7/317 (2%) Strand=Plus/Plus Query 179260 CTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGTATCCGTCCTTA 179318 ||||| || |||||| || |||||||| || || ||| || | | | ||||| Sbjct 9264 CTAATAGGTTTCATGNNNNNNCAATTTGAACTTGCTCGGTCTGTTCAAT-TGCAACCTTA 9322 Query 179319 CAATGCGATTGCTTTTACTGGTCCTATTGCCGTATTCGTTAGTGTATTTCTCATCTACCC 179378 ||||| || | || ||||||| |||| || | | |||||| || || | || Sbjct 9323 TAATGCAATCTCATTCTCTGGTCCAATTGTTACTTTTGCTTCTGTATTCCTTATTTGTCC 9382 Query 179379 ACTTGGACAATCCAGTTGGTTCTTTGCGCCATCGTTTGGTGTTGCGGCGATCTTTAGATT 179438 ||| || ||||| ||| ||||||||||| ||||| | | ||| || |||| Sbjct 9383 ACTGGGGCAATCTGGTTAGTTCTTTGCGCTGAGTTTTGGCGCAACAATGATACTTTGATT 9442 Query 179439 CCTACTTTTCTTACAAGGTTTCCACAACTGGACACTCAACCCCTTTCACATGATGGGAGT 179498 | | |||||||| ||||| || || || ||| | |||| ||||| ||||||||| | Sbjct 9443 CATCCTTTTCTTCCAAGGATTTCATAA-TGGGAGTTGTACCCATTTCATATGATGGGATT 9501 Query 179499 TGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGCTATTCATGGAGTAACTGTAGAGAATAC 179558 ||| || | | || ||| || | ||||||||||||| ||| |||| || || Sbjct 9502 TGCCGGAGTATTAGGCATGAGTCTTCTATGCGCTATTCATGGAGCAAC-CTAGAAAACAC 9560 Query 179559 ---ATTGTATGAAGATG 179572 ||| || || |||| Sbjct 9561 TCTATTTTAGGATGATG 9577 >seq188012 Length=2438 Score = 84.2 bits (92), Expect = 3e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 177885 TATATGGGACGTGAGTGGGAACTTTCATACCGTCTAGGTATGCGCCCCTGGATCTGTGTT 177944 |||||||| |||||||||||||| | |||||| |||||||| || ||||| |||| Sbjct 2351 TATATGGGTTGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTT 2410 Query 177945 GCATACTCTGCACCTGTTGCAGCAGC 177970 ||||| || || ||||||||||| || Sbjct 2411 GCATATTCAGCTCCTGTTGCAGCTGC 2436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589935743993160