Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_023692.1 Length=48984 Score E Sequences producing significant alignments: (Bits) Value seq833769 102 2e-17 >seq833769 Length=269 Score = 102 bits (112), Expect = 2e-17 Identities = 118/155 (76%), Gaps = 3/155 (2%) Strand=Plus/Minus Query 38526 GGGCG-AGTGCCTGCGGATCCTCAAGCCTGGCGGTTACATGCTGGCGTTCGGAGGCTCGC 38584 ||||| |||||||||| | || ||||||||||| | | ||||| |||| |||| ||| Sbjct 212 GGGCGCAGTGCCTGCGCGTACTGAAGCCTGGCGGCCATCTACTGGCCTTCGCAGGCACGC 153 Query 38585 GCACCTGGCACCGGCTCG-CGTCTGCGATCGAGGACGCCGGTTTCGAGGTTCGCGACTCG 38643 ||||| ||| || | | ||| || |||||||| || ||||||||| | |||||| | Sbjct 152 GCACCCAGCATCGCATGGCCGTTCGC-ATCGAGGATGCGGGTTTCGAGATCCGCGACATG 94 Query 38644 ATCGCGTGGCTGTTCGGTTCCGGGTTTCCGAAGTC 38678 ||||| ||| | | ||| || || || |||||||| Sbjct 93 ATCGCCTGGGTCTACGGCTCGGGCTTCCCGAAGTC 59 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152762412190852