Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_023695.1 Length=52481 Score E Sequences producing significant alignments: (Bits) Value seq833769 125 2e-24 >seq833769 Length=269 Score = 125 bits (138), Expect = 2e-24 Identities = 125/162 (77%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 41752 GATTTCGGGAACCCGCTGCCGTAGAGCCAGGCGATGGAGTCGCGGATCTCGAAGCCCGCG 41811 || |||||||| || |||||||| ||||||||| ||||||||||||||| ||||| Sbjct 59 GACTTCGGGAAGCCCGAGCCGTAGACCCAGGCGATCATGTCGCGGATCTCGAAACCCGCA 118 Query 41812 TCCTCGATGGCCACGGTCAGCCGGTGCCAGGTGCGGGAGCCACCGAAGGCGAGCAGGTGC 41871 ||||||||| |||| || || ||| |||||| | ||| ||||||| || || || Sbjct 119 TCCTCGATGCGAACGGCCATGCGATGCTGGGTGCGCGTGCCTGCGAAGGCCAGTAGATGG 178 Query 41872 CCACCGGGCTTGAGGACCCGCAGGCATTGCTCCCACATCTCG 41913 || || ||||| || || |||||||| ||| |||| || ||| Sbjct 179 CCGCCAGGCTTCAGTACGCGCAGGCACTGCGCCCAGATATCG 220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163676688238566