Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_023699.1 Length=59016 Score E Sequences producing significant alignments: (Bits) Value seq833769 104 9e-18 >seq833769 Length=269 Score = 104 bits (114), Expect = 9e-18 Identities = 124/166 (75%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 43878 CGTCGAGATGTGGAAGCAATGCCTGCGGGTCCTCAAACCCGGTGGGCACCTGCTCGCCTT 43937 || ||| || ||| ||| |||||||| || || || || || || || || || ||||| Sbjct 223 CGCCGATATCTGGGCGCAGTGCCTGCGCGTACTGAAGCCTGGCGGCCATCTACTGGCCTT 164 Query 43938 CGGCGGCTCCCGCACCTGGCACCGGCTCGC-GTCGGCCATCGAGGACGCGGGCTTCGAGA 43996 || ||| | |||||| ||| || | || || || |||||||| ||||| ||||||| Sbjct 163 CGCAGGCACGCGCACCCAGCATCGCATGGCCGTTCGC-ATCGAGGATGCGGGTTTCGAGA 105 Query 43997 TCCGCGACTCCATCGCCTGGCTCAACGGCAGCGGATTCCCGAAATC 44042 |||||||| ||||||||| || ||||| || |||||||| || Sbjct 104 TCCGCGACATGATCGCCTGGGTCTACGGCTCGGGCTTCCCGAAGTC 59 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184072683083236