Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_023723.1 Length=53684 Score E Sequences producing significant alignments: (Bits) Value seq833769 118 4e-22 >seq833769 Length=269 Score = 118 bits (130), Expect = 4e-22 Identities = 128/170 (75%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 41901 CGTCGAGCGACTTCGGGAACCCGGATCCGTACAGCCAGGCGATGGAGTCACGAATCTCGA 41960 ||| | | ||||||||||| || || ||||| | ||||||||| ||| || ||||||| Sbjct 51 CGTTGTGTGACTTCGGGAAGCCCGAGCCGTAGACCCAGGCGATCATGTCGCGGATCTCGA 110 Query 41961 AACCGGCGTCCTCGATGGCCACGGCCAGCCGGTGCCAGGTGCGCGAACCGCCGAACGCCA 42020 |||| || ||||||||| ||||||| || ||| |||||||| || |||| |||| Sbjct 111 AACCCGCATCCTCGATGCGAACGGCCATGCGATGCTGGGTGCGCGTGCCTGCGAAGGCCA 170 Query 42021 ACATGTGCCCACCCGGCTTGAGGACCCGCAGGCATTGCTCCCACATCTCG 42070 | || || || ||||| || || |||||||| ||| |||| || ||| Sbjct 171 GTAGATGGCCGCCAGGCTTCAGTACGCGCAGGCACTGCGCCCAGATATCG 220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167431299072252