Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_023724.1 Length=62991 Score E Sequences producing significant alignments: (Bits) Value seq71034 102 3e-17 >seq71034 Length=3563 Score = 102 bits (112), Expect = 3e-17 Identities = 89/111 (80%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 52029 ATGCCCGACGCGCACGTCGGCAAAGGTTCGTCTGTTGGTACCGTCATCCCCACCCGCGGC 52088 |||||||||| ||||| ||||| || ||| | | || | ||| ||||| || | ||| Sbjct 1583 ATGCCCGACGTCCACGTGGGCAAGGGATCGACCATCGGCAGCGTGATCCCGACGCTGGGC 1642 Query 52089 GCAGTCATCCCCGCCGCGGTCGGTGTCGACATCGGCTGCGGCATGATCGCC 52139 || |||| || ||||||||||| ||||||||||||||||||||||| ||| Sbjct 1643 GCGATCATTCCGGCCGCGGTCGGGGTCGACATCGGCTGCGGCATGATGGCC 1693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 196478816137186