Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_023736.1 Length=40411 Score E Sequences producing significant alignments: (Bits) Value seq28003 82.4 2e-11 >seq28003 Length=244 Score = 82.4 bits (90), Expect = 2e-11 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 38673 AGGACCTGCTGGAGCGGGAGGTGTCCTACGGCAAGGCGGGCTTCATGCTTCAGTTCATGC 38732 ||||| || ||||||| |||| ||||||||| | ||||||||||| |||||||||| Sbjct 241 AGGACTTGATGGAGCGCGAGGCGTCCTACGGACGCTCCGGCTTCATGCTCCAGTTCATGC 182 Query 38733 TGGACACGAGCCTGTCGGATGCCGAGAAGTATCCCCTGCGCCTGCGTGACCTCATCGT 38790 | || || ||||| || ||||||||||| || || ||| ||||| ||||| Sbjct 181 TCGATGCGTCGCTGTCCGACGCCGAGAAGTACCCGCTCAAGCTGTCCGACCTGATCGT 124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126005738311226