Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_023744.1 Length=60588 Score E Sequences producing significant alignments: (Bits) Value seq71034 111 6e-20 >seq71034 Length=3563 Score = 111 bits (122), Expect = 6e-20 Identities = 112/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 49388 GCCTGCCGTTCGTCCACCCGCATGTGGCGCTGATGCCCGACGCGCACGCCGGCAAGGGTT 49447 || |||| ||| || || ||| ||||| ||||||||||| |||| |||||||| | Sbjct 1551 GCATGCCCTTCATCTACAAGCACATGGCGGCGATGCCCGACGTCCACGTGGGCAAGGGAT 1610 Query 49448 CATCGGTCGGCACCGTCATCCCGACTATCGACGCCGTGATCCCGGCCGCGGTGGGCGTGG 49507 | | |||||| ||| |||||||| | | ||| | || ||||||||||| || || | Sbjct 1611 CGACCATCGGCAGCGTGATCCCGACGCTGGGCGCGATCATTCCGGCCGCGGTCGGGGTCG 1670 Query 49508 ACATCGGCTGCGGGATGATCGCCGCC 49533 ||||||||||||| ||||| |||||| Sbjct 1671 ACATCGGCTGCGGCATGATGGCCGCC 1696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 188978957589100