Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_
202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq95629 136 8e-27
seq839203 132 9e-26
seq895220 116 7e-21
seq1142613 114 2e-20
seq1989185 113 9e-20
seq218242 113 9e-20
seq138792 111 3e-19
seq878454 107 4e-18
seq221428 105 1e-17
seq176325 104 4e-17
seq1991079 102 2e-16
seq139869 102 2e-16
seq461939 95.1 2e-14
seq260872 91.5 3e-13
seq19311 89.7 1e-12
seq845905 87.8 3e-12
seq362679 86.0 1e-11
seq123434 86.0 1e-11
seq570189 84.2 4e-11
>seq95629
Length=7091
Score = 136 bits (150), Expect = 8e-27
Identities = 171/231 (74%), Gaps = 9/231 (4%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG-- 82641
|| || | || ||| || || ||||| |||||||| || |||||||||||||||||||
Sbjct 3315 CCACCACGCAGACGGAGGACCAAGTGAAGAGTAGACTCCTTCTGTATATTATAATCAGCC 3374
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| |||| | ||||| || || || ||||| |||||||| || | || || || | |
Sbjct 3375 AAAGAA--CGCCCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGCATCTGCTGGTCAGCCG 3432
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCT- 82760
| || || |||||||||||| |||| || || ||||| ||||| || || || |||
Sbjct 3433 GGATACCCTCCTTATCTTGATTCTTGGCCTTCACATTATCAATGGTGTC---GGGCTCTC 3489
Query 82761 -ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || | ||||| ||||| || || | ||||| ||||| ||||||||
Sbjct 3490 AACCTCTAGGGTTATGGTCTTCCCAGTGAGAGTCTTCACAAAAATCTGCAT 3540
Score = 100 bits (110), Expect = 5e-16
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| |||||||| || || || ||||| || ||||| || || ||||| || ||||||||
Sbjct 3773 TTGCCAGCAAATATGAGCCTCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTG 3832
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
||||| ||||| ||||| ||||| | || | || | ||| || |||| ||| ||
Sbjct 3833 GCTTTAACATTGTCAATGGTATCCGAACTCTCAGCCTCGAGAGTGATAGTCTAGCCGGTG 3892
Query 82788 AACGTCTTTACAAATATCTGCAT 82810
| ||||||||||| ||||||||
Sbjct 3893 AGGGTCTTTACAAAGATCTGCAT 3915
>seq839203
Length=7618
Score = 132 bits (146), Expect = 9e-26
Identities = 159/215 (74%), Gaps = 1/215 (0%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| ||||||| ||| ||||| || |||||||| || || ||||| | ||| | | |||
Sbjct 923 CGGAGAACTAGGTGAAGAGTGGACTCTTTCTGGATGTTGTAATCGGCTAGGGTGCGACCA 982
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || ||||| || ||||||||||| | | ||||| || || || || || |||||
Sbjct 983 TCCTCAAGTTGCTTGCCAGCAAAGATCAACCGCTGTTGGTCCGG-GGGATGCCCTCCTTG 1041
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || ||||| ||||| ||||| || ||||| || || || || || | ||| ||
Sbjct 1042 TCCTGGATCTTCGCTTTGACATTGTCGATCGTGTCGGAAGACTCAACCTCAAGAGTGATG 1101
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | ||||| || || ||||||||
Sbjct 1102 GTCTTGCCGGTGAGGGTCTTCACGAAAATCTGCAT 1136
>seq895220
Length=1325
Score = 116 bits (128), Expect = 7e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| | | ||| || || | ||| || || || || ||||| || || || ||||
Sbjct 1283 CCTCCACGAAGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 1224
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | || ||||| || || || || ||||| ||||| || | || || || || ||
Sbjct 1223 AGGGTCCTGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 1164
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || ||||| || || ||||| || || || || || || || ||| | || ||
Sbjct 1163 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGACGACTCGACC 1104
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || |||||||||||||||||||| ||||| ||||||||
Sbjct 1103 TCAAGGGTGATGGTCTTGCCTGTCAACGTCTTCACAAAGATCTGCAT 1057
>seq1142613
Length=436
Score = 114 bits (126), Expect = 2e-20
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||| | |||||| || | || || || || || ||||| || || || ||||
Sbjct 343 TACCACCTCGTAGACGCAGGACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 284
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
|| | | || || || || || || ||||||||||| || | || || || ||||
Sbjct 283 CAAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAG 224
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760
| || || ||||| || || ||||| || || ||||| || || || || | || | ||
Sbjct 223 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTC-TGAGCTCTCA 165
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| |||| ||| || |||||||| || | ||||| ||||| ||||||||
Sbjct 164 ACCTCCAGAGTGATGGTCTTGCCAGTAAGGGTCTTCACAAAGATCTGCAT 115
>seq1989185
Length=2918
Score = 113 bits (124), Expect = 9e-20
Identities = 168/236 (71%), Gaps = 2/236 (1%)
Strand=Plus/Plus
Query 82576 ATCACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTAT 82635
||||| ||| |||| | || || || | ||| ||||| ||||| ||||| || || |
Sbjct 2519 ATCACTGACCACCTCGGAGGCGGAGCACCAGGTGAAGAGTGGATTCCTTCTGGATGTTGT 2578
Query 82636 AATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGAT 82695
| || | || | | || || || || || || ||||||||||| || | || || |
Sbjct 2579 AGTCGGCAAGGGTGCGCCCATCCTCCAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGT 2638
Query 82696 CTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAG 82755
| || || || || ||||| || || ||||| || || || || ||||| || || | ||
Sbjct 2639 CCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATAGTGTC-TGAG 2697
Query 82756 GT-TCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || || |||| ||| || |||||||| || | ||||| ||||| ||||||||
Sbjct 2698 CTCTCAACCTCCAGAGTGATGGTCTTGCCAGTAAGGGTCTTCACAAAGATCTGCAT 2753
Score = 84.2 bits (92), Expect = 4e-11
Identities = 118/166 (71%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
||||||||| | |||||| || | || || || || || ||||| || || |||||||
Sbjct 2753 TACCTCCTCGGAGACGCAGGACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAATCAG 2812
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
||| | | || || || || || || ||||||||||| || | || || || || |
Sbjct 2813 CAAGAGTACGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGG 2872
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGT 82747
| || || ||||| || || ||||| || || || || || || ||
Sbjct 2873 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGT 2918
>seq218242
Length=2478
Score = 113 bits (124), Expect = 9e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||||| | || || || | ||| || || || || ||||| || || || ||||
Sbjct 1468 CCTCCTCGAAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 1409
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | || || || || || || || || |||||||| || | || || || || ||
Sbjct 1408 AGGGTCCTGCCATCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGA 1349
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| |||||||| || || ||||| || || || || || || || || | ||| ||
Sbjct 1348 ATGCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGATGATTCCACC 1289
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| || || |||||||| ||||||||||| || || ||||||||
Sbjct 1288 TCCAGGGTGATGGTCTTGCCAGTCAACGTCTTGACGAAGATCTGCAT 1242
Score = 104 bits (114), Expect = 4e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| || || || || ||||| || || || |||| || | || ||
Sbjct 1228 CGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCA 1169
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || ||||||||||| || | || || || ||||| || || |||||
Sbjct 1168 TCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTG 1109
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || ||||| | || ||||| || || || ||| | || || || | || ||
Sbjct 1108 TCCTGGATCTTGGACTTGACATTGTCGATTGTGTCAGACGACTCCACCTCAAGGGTGATG 1049
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || ||||| ||||| ||||| ||||||||
Sbjct 1048 GTCTTTCCAGTCAATGTCTTCACAAAGATCTGCAT 1014
Score = 104 bits (114), Expect = 4e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| || || || || ||||| || || || || | || | | ||
Sbjct 1912 CGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCA 1853
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || | || || ||||||||||| || | || || || || || || || |||||
Sbjct 1852 TCCTCCAACTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCAGGGGGGATCCCCTCCTTG 1793
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || ||||| || || ||||| ||||| || ||| | || || |||||||| ||
Sbjct 1792 TCCTGGATCTTCGCCTTGACATTGTCAATGGTGTCAGAACTCTCAACCTCCAAAGTGATG 1733
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || |||| ||||| ||||| ||||||||
Sbjct 1732 GTCTTCCCGGTCAGGGTCTTCACAAAGATCTGCAT 1698
Score = 100 bits (110), Expect = 5e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| || ||||| || ||||| || || || |||| ||| | | |||
Sbjct 1684 CGGAGGACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTGCGACCA 1625
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || ||||||||||| || | || || || || || || || |||||
Sbjct 1624 TCCTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTG 1565
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || ||||| || || || || || || || || | ||| || || | || ||
Sbjct 1564 TCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGATGATTCCACCTCAAGTGTGATG 1505
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | ||||| || || ||||||||
Sbjct 1504 GTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 1470
>seq138792
Length=3226
Score = 111 bits (122), Expect = 3e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || ||||| || || || || ||||| || || || || | | | | ||
Sbjct 294 ACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGCCAAGGTACGGCC 235
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || || || || ||||||||||| || | || || || || || || ||||||||
Sbjct 234 ATCCTCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCTTCCTT 175
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
|| || |||||||| || ||||| || || || || || || || ||||| || ||
Sbjct 174 GTCCTGGATCTTTGCCTTCACATTGTCGATGGTGTCCGAAGACTCCACCTCCAATGTGAT 115
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | ||||||||||| || |||||
Sbjct 114 GGTCTTGCCCGTGAGGGTCTTTACAAAGATTTGCAT 79
>seq878454
Length=5435
Score = 107 bits (118), Expect = 4e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658
|| || | ||| ||||| || || ||||| || ||||| |||| || | | || ||
Sbjct 817 AGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTATAGTCAGCCAGGGTGCGGCCATCC 758
Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718
|| || || || || |||||||| || | || || || || || || |||||||||||
Sbjct 757 TCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCTTCCTTATCC 698
Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778
|| |||||||| || || || || || || ||| | || || || | || || |||
Sbjct 697 TGGATCTTTGCCTTCACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATGGTC 638
Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| |||| ||||| || || ||||||||
Sbjct 637 TTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 606
Score = 100 bits (110), Expect = 5e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| || || || || ||||| || || ||||| | || | | ||
Sbjct 1048 CGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCTGCCAGGGTGCGGCCA 989
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || || |||||||| |||| || || || || || || || |||||
Sbjct 988 TCCTCAAGCTGCTTGCCGGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTG 929
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || ||||| || || ||||| || || || || | || || ||||| || ||
Sbjct 928 TCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCCGAGGACTCCACCTCCAAGGTGATG 869
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||||||||| | ||||| || || ||||||||
Sbjct 868 GTCTTGCCTGTGAGGGTCTTCACGAAAATCTGCAT 834
>seq221428
Length=956
Score = 105 bits (116), Expect = 1e-17
Identities = 148/204 (73%), Gaps = 3/204 (1%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|||||||| |||||||| || || ||||||| | | | | || || || || ||
Sbjct 304 TGCAGAGTGGATTCTTTTTGGATGTTATAATATGCCAAGGTACGCCCATCCTCCAGCTGC 245
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
| || |||||||| || || || ||||||||||| || || ||||| || || |||||
Sbjct 244 CTCCCTGCAAAGATAAGCCTCTGCTGATCTGGAGGAATCCCCTCCTTGTCCTGGATCTTG 185
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGTCTTGCCTGT 82786
|| || ||||| || || || | | || | || ||||| | ||| || ||||| | ||
Sbjct 184 GCCTTCACATTATCGATGGTGT-AGGAGCTCTCCACTTCAAGAGTAATGGTCTTCCAAGT 126
Query 82787 CAACGTCTTTACAAATATCTGCAT 82810
|| ||| ||||||| ||||||||
Sbjct 125 TAATGTC-TTACAAAAATCTGCAT 103
>seq176325
Length=1574
Score = 104 bits (114), Expect = 4e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || ||||| || || || || ||||| || || || || | ||| | | ||
Sbjct 227 CGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCCA 168
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || ||||||||||| || | || || || || || || || |||||
Sbjct 167 TCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTG 108
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || |||||||| || ||||| || || || ||| | || || |||| || ||
Sbjct 107 TCCTGGATCTTTGCCTTCACATTGTCGATGGTGTCAGATGACTCAACCTCCAGGGTGATG 48
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | ||||| || || ||||||||
Sbjct 47 GTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 13
>seq1991079
Length=1418
Score = 102 bits (112), Expect = 2e-16
Identities = 153/216 (71%), Gaps = 1/216 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || ||||| || || || || ||||| || ||||| || | ||| | | ||
Sbjct 1219 ACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCCGCTAGGGTGCGGCC 1160
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || || || || ||||||||||| || | || | || || || || || |||||
Sbjct 1159 ATCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTAGTCCGGGGG-ATGCCCTCCTT 1101
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
|| || ||||| || || || || || || || ||| | || || |||| || ||
Sbjct 1100 GTCCTGGATCTTCGCCTTCACGTTGTCTATGGTGTCAGATGACTCCACCTCCATGGTGAT 1041
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | ||||| ||||||||||||||
Sbjct 1040 AGTCTTGCCGGTGAGGGTCTTCACAAATATCTGCAT 1005
>seq139869
Length=4701
Score = 102 bits (112), Expect = 2e-16
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || ||||| || || || || ||||| || || || || | || | | ||
Sbjct 988 ACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCAAGGGTGCGGCC 929
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || || || || || || ||||| | | || || ||||| || || || |||||
Sbjct 928 ATCCTCAAGCTGCTTACCGGCGAAGATCAAGCGCTGCTGGTCTGGGGGGATGCCCTCCTT 869
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
|| ||||||||||| || || || ||||| || ||| || || || |||| || ||
Sbjct 868 GTCCTGAATCTTTGCCTTCACGTTGTCAATGGTGTCAGAAGACTCAACCTCCAGGGTGAT 809
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || | ||||| ||||| ||||||||
Sbjct 808 GGTCTTCCCGGTGAGGGTCTTGACAAAAATCTGCAT 773
>seq461939
Length=221
Score = 95.1 bits (104), Expect = 2e-14
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || ||||||||||| || | || || || || || || || ||||||
Sbjct 221 TCCTCCAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTA 162
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || ||||| || || ||||| || || || || | || || || | || ||
Sbjct 161 TCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGACGACTCGACCTCTAGCGTGATG 102
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| ||||||||||| ||||| ||||||||
Sbjct 101 GTCTTGCCAGTCAACGTCTTCACAAAGATCTGCAT 67
>seq260872
Length=904
Score = 91.5 bits (100), Expect = 3e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | |||||| || || || ||||| | || || || | || | | |||
Sbjct 891 CGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGACGTTGTAGTCGGCCAGCGTGCGGCCG 832
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || || || ||||| |||| || || || || || || || |||||
Sbjct 831 TCCTCCAGCTGCTTCCCGGCGAAGATGAGTCGCTGCTGGTCCGGCGGGATCCCCTCCTTG 772
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || ||||| || || || || || || || || | || || |||| || |||
Sbjct 771 TCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGCTGCTCTCCACCTCCAGGGTGATC 712
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| |||| ||||| || || ||||||||
Sbjct 711 GTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 677
>seq19311
Length=2760
Score = 89.7 bits (98), Expect = 1e-12
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 82614 GTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCA 82673
|| || || ||||| || ||||| || | || | | || || || || || || |||
Sbjct 2760 GTGGACTCCTTCTGGATGTTATAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCA 2701
Query 82674 GCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTT 82733
|||||||| || | || || || ||||| || || ||||| || || ||||| || ||
Sbjct 2700 GCAAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTG 2641
Query 82734 ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTC 82793
|| || || || || || | || || || | || || |||||||| |||| |||
Sbjct 2640 ACGTTGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTC 2581
Query 82794 TTTACAAATATCTGCAT 82810
|| ||||| ||||||||
Sbjct 2580 TTCACAAAGATCTGCAT 2564
>seq845905
Length=1909
Score = 87.8 bits (96), Expect = 3e-12
Identities = 114/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712
|| || || || || || ||||||||||| || | || || || ||||| || || |||
Sbjct 1908 CCATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCC 1849
Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772
|| || || ||||| || || ||||| ||||| || || || || || || | ||
Sbjct 1848 TTGTCCTGGATCTTAGCCTTGACATTGTCAATGGTGTCGGAAGACTCGACCTCAAGGGTG 1789
Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| |||||||| || | ||||| ||||| || |||||
Sbjct 1788 ATGGTCTTGCCAGTGAGGGTCTTCACAAAGATTTGCAT 1751
>seq362679
Length=1828
Score = 86.0 bits (94), Expect = 1e-11
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| || || || || ||||| || || || || | || | | ||
Sbjct 1738 CGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCA 1679
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
||||| || || || || || ||||| || | || || || ||||| || || |||||
Sbjct 1678 TCTTCGAGCTGCTTACCGGCGAAGATCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTG 1619
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || ||||| || || || || || || || || | || || || | || ||
Sbjct 1618 TCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATG 1559
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | ||||| ||||||||||||||
Sbjct 1558 GTCTTGCCGGTGAGAGTCTTAACAAATATCTGCAT 1524
>seq123434
Length=6912
Score = 86.0 bits (94), Expect = 1e-11
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 82598 CAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTC 82657
||| || || || || || || |||||||| || || ||||||| || ||| || ||
Sbjct 4098 CAGGACCAAATGGAGCGTCGACTCTTTCTGAATGTTGTAATCAGCTAATGTTCGCCCATC 4157
Query 82658 TTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATC 82717
||| | || ||||||||||| ||||| ||||| || ||||| || || || ||||| ||
Sbjct 4158 TTCCAACTGCTTTCCAGCAAAAATTAGCCTTTGCTGGTCTGGGGGAATGCCCTCCTTGTC 4217
Query 82718 TTGAA 82722
||||
Sbjct 4218 CTGAA 4222
>seq570189
Length=212
Score = 84.2 bits (92), Expect = 4e-11
Identities = 112/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | ||| || || || || ||||| || || || |||| || | | ||
Sbjct 27 ACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCC 86
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || |||||||| ||||||||||| || | || || || || || || || |||||
Sbjct 87 ATCCTCGAGTTGTTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTT 146
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATC 82750
|| || ||||| || || ||||| ||||| || ||
Sbjct 147 GTCCTGGATCTTAGCCTTGACATTGTCAATGGTGTC 182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 955687909828439
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |