Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq138792 86.0 6e-12 >seq138792 Length=3226 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | ||||| || |||||||||||||| || |||||| ||| || Sbjct 287 ACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGCCAAGGTACGGCCATCCTCA 228 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| ||||| | | |||| |||||||| || || || || |||||||| || || Sbjct 227 AGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGG 168 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || ||| |||| | || | || || | | |||||| || | || | || || Sbjct 167 ATCTTTGCCTTCACATTGTCGATGGTGTCCGAAGACTCCACCTCCAATGTGATGGTCTTG 108 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || || || || |||| || || |||||| Sbjct 107 CCCGTGAGGGTCTTTACAAAGATTTGCATG 78 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 464231813886360