Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq900588 607 1e-168 seq94777 549 2e-151 seq174834 174 2e-38 seq747441 132 6e-26 seq143040 114 2e-20 seq263076 105 8e-18 seq2075000 98.7 1e-15 seq124049 93.3 5e-14 seq219505 87.8 2e-12 seq1972347 86.0 7e-12 seq188012 84.2 3e-11 >seq900588 Length=4557 Score = 607 bits (672), Expect = 1e-168 Identities = 734/994 (74%), Gaps = 4/994 (0%) Strand=Plus/Plus Query 178861 TTCTGCGAGTGGGTAACGTCCACCAACAATCGTTTGTATGTTGGTTGGTTCGGTGTGCTG 178920 |||||| | ||| |||| ||| | |||||| | || | || ||||||||||| || Sbjct 3000 TTCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTG 3059 Query 178921 ATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTTGCTTTCGTAGCAGCACC 178979 ||||| ||||| || | | |||||| ||||| || || | || ||| | || || || Sbjct 3060 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 3118 Query 178980 TCCCGTCGATATTGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGAAACAA 179039 ||| || |||||||| || || || || || || ||||||| | | ||||||||||| Sbjct 3119 TCCAGTAGATATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAA 3178 Query 179040 CATCATCTCTGGTGCTGTTGTCCCAAGTTCAAACGCAATTGGTCTACACTTCTACCCCAT 179099 || |||||||||||| || | || | ||| || || || | ||||| ||||| || Sbjct 3179 TATTATCTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 3238 Query 179100 CTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTAGT 179159 |||||||| ||||| | ||||||||| | || || |||||||||| | || | || Sbjct 3239 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 3298 Query 179160 CTTCCACTTCCTTATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCG 179219 | |||||| | | || | | |||||||| ||||||||||||||| || ||| Sbjct 3299 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 3358 Query 179220 TCTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCTGCGAGTGC 179279 ||| ||||||||||| ||||| ||||||||| || || || || || ||||| | ||| Sbjct 3359 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 3418 Query 179280 AGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCTATGCCTCTTGGTAT 179339 || ||| | | || ||| | |||||||| || ||||||| ||||||| | || || Sbjct 3419 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTTTAGGAAT 3478 Query 179340 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCC 179399 |||||||||||| |||| ||| |||||||||| ||||| ||||||||||||||||| || Sbjct 3479 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCC 3538 Query 179400 GTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 179459 ||||| ||| | ||||| ||||| |||||||| || || || ||| ||||||||| || Sbjct 3539 ATTCCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 3598 Query 179460 AAGTCTCGTTACTTCCTCGCTTGTTC-GTGAAACAACTGAGACAGAGTCACAGAACTATG 179518 | || || || | | ||| || | ||||| ||||| | || || || | | Sbjct 3599 TTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGG 3657 Query 179519 GTTATAAGTTCGGACAAGAAGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTCG 179578 |||| || || || ||||| |||||||| ||||| || || || || ||||| || || | Sbjct 3658 GTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTG 3717 Query 179579 GTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTTTGCACTTCTTCCTTG 179638 | || || |||||||||||||| || |||||||| || ||||| ||||||||| | | Sbjct 3718 GCCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGG 3777 Query 179639 CTGCGTGGCCGGTTGTCGGCATCTGGTTCACTGCTCTTGGCGTGTCAACCATGGCGTTCA 179698 |||| ||||| || || || ||||||||||||||| | || | || ||||| |||| Sbjct 3778 CTGCTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 3837 Query 179699 ACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGACGGTCAAGGACGTGTCCTTAACA 179758 |||| || |||||||| |||||||| || | |||| ||||||| || || |||| | Sbjct 3838 ACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATA 3897 Query 179759 CATGGGCGGACGTATTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAACG 179818 | ||||| || | | |||||||| | ||||||||||| ||||| || ||||| | Sbjct 3898 CTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAACGTAATG 3957 Query 179819 CACACAACTTCCCACTCGACCTTGCTGCTGCTGA 179852 | ||||||||||| || ||| | ||||||| ||| Sbjct 3958 CTCACAACTTCCCTCTAGACTTAGCTGCTGTTGA 3991 >seq94777 Length=2712 Score = 549 bits (608), Expect = 2e-151 Identities = 726/1002 (72%), Gaps = 4/1002 (0%) Strand=Plus/Plus Query 180031 TGGACGACTGGCTTAAACGCGACCGCTTTGTATTTGTGGGCTGGTCTGGACTACTACTTC 180090 |||| |||||| | | | ||||| || || ||||| || |||||||| ||| | || Sbjct 1076 TGGATGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCTGGCCTATTGCTCT 1135 Query 180091 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTT 180150 |||| ||||||| | || | || |||||| |||| || ||| ||||||| || || Sbjct 1136 TTCCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACAACTTTTGTAACTTCTT 1195 Query 180151 GGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTTA-CGGCAGCT 180209 |||| ||||| || | || ||||||| | |||||| ||| ||||||| | ||||| Sbjct 1196 GGTATACCCATGGATTGGCAAGTTCCTATTTGGAAGGTTGTAA-TTTCTTAACCGCAGCA 1254 Query 180210 GTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 180269 || || || ||||| | | | | || ||| | | ||||| ||||| || || | Sbjct 1255 GTTTCTACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGGCCAGAAGCA 1314 Query 180270 CAGGGGAATTTCCAACGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCAC 180329 || || |||| || ||||| ||| | || || || |||| ||| || ||||||||| Sbjct 1315 CAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTATGGACTTTTGTAGCTCTCCAC 1374 Query 180330 GGTGCCTTCGCCCTAATTGGATTTATGCTACGCCAGTTTGAACTGGCACGTCTTATTGGT 180389 || || || || ||||| || || ||| ||||||| |||||||| || || | || Sbjct 1375 GGGGCTTTTGCACTAATAGGTTTCATGTTACGCCAATTTGAACTTGCTCGGTCTGTTCAA 1434 Query 180390 ATCCGTCCTTACAATGCTATTGCATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTT 180449 | || ||||| ||||| || ||||||||||||| || ||||| ||||| ||||| Sbjct 1435 TTGCGGCCTTATAATGCAATCTCATTCTCTGGTCCAATTGCTGTTTTTGTTTCGGTATTC 1494 Query 180450 CTCATCTACCCACTGGGTCAGTCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCA 180509 || || || |||||||| || || ||||||||||||| || |||||| |||||||| Sbjct 1495 CTTATTTATCCACTGGGGCAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCG 1554 Query 180510 ATCTTTAGATTCCTACTCTTTCTT-CAGGGTTTCCACAACTGGACCCTCAACCCCTTCCA 180568 || ||| ||||| | || |||||| || || || || || ||||| | ||||| || || Sbjct 1555 ATATTTCGATTCATCCT-TTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCA 1613 Query 180569 TATGATGGGAGTTGCTGGTATACTAGGTGGAGCATTGCTATCAGCAATCCATGGCGTAAC 180628 ||||||||||||||| || || |||| | || |||||| || || ||||| | ||| Sbjct 1614 TATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGAGCAAC 1673 Query 180629 TGTGGAGAACACACTGTATGAAGATGGAGAACAAGCAAACACCTTTAAGGCATTTGATTC 180688 || || ||||| || | ||| || || || ||||| ||||| || ||| | | Sbjct 1674 CGTAGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGTGCTTTTAACCC 1733 Query 180689 AACGCAAGAGGAGGAAACTTACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTT 180748 ||| |||| || |||||||| || ||||||||||| |||||||| ||||| || ||||| Sbjct 1734 AACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTT 1793 Query 180749 CGGTATTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTAT 180808 ||| |||| ||||| || || || ||| | ||||| || ||| | ||||| || || | Sbjct 1794 TGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCAC 1853 Query 180809 GGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGA 180868 ||| |||||| |||||||| | |||| | ||||| ||| | ||||| || || Sbjct 1854 CGGTTTATGGATGAGTGCTATTGGCGTAGTTGGCTTGGCTCTGAACTTACGTGCCTATGA 1913 Query 180869 TTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACCAA 180928 || || || || ||| | ||||| ||||||||||| |||||||| ||||||||||| Sbjct 1914 CTTTGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTCGAGACTTTCTACACCAA 1973 Query 180929 GAACATCCTATTGAATGAAGGACTACGTGCATGGTTGGCACCTGCCGATCAACCACACGA 180988 || || || || || || || | ||||| ||| ||||| || ||||| || || || Sbjct 1974 AAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGA 2033 Query 180989 AAACTTCATCTTCCCTGAAGAAGTTCTACCAAGAGGTAACGC 181030 ||| | || |||||||| || ||||||||| | || ||||| Sbjct 2034 AAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGC 2075 >seq174834 Length=1002 Score = 174 bits (192), Expect = 2e-38 Identities = 421/629 (67%), Gaps = 9/629 (1%) Strand=Plus/Minus Query 180031 TGGACGACTGGCTTAAACGCGACCGCTTTGTATTTGTGGGCTGGTCTGGACTACTACTTC 180090 |||| |||||| | | | | ||| || | ||||| || |||| ||| ||| | || Sbjct 625 TGGATGACTGGTTACGAAGGGGCCGTTTCATTTTTGTAGGATGGTATGGCCTATTGCTCT 566 Query 180091 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTT--ACTGGCACAGCTTTTGTCACGAG 180148 |||| ||||||| || | || | |||||| || || || ||| ||| ||| || Sbjct 565 TTCCTTATGCTTAT-TTCTCTTTAGGGGTTGGTTTTTACAGGAACAACTTATGTAACTTC 507 Query 180149 TTGGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTTA-CGGCAG 180207 || ||| || || || || || ||||||| | |||| ||| ||||||| | || Sbjct 506 TTTGTATACTCATGGACTGGCAAGTTCCTATTTGCGAGGTTGTAA-TTTCTTAACAGCGA 448 Query 180208 CTGTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGT 180267 | | || || ||| | | | | || ||| | | ||||| ||||| || || Sbjct 447 CAATTTCTACCTTTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGGCCAGAAG 388 Query 180268 CTCAGGGGAATTTCCAACGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCC 180327 | || | |||| || ||||| ||| | || || || |||| ||| || || |||| Sbjct 387 CACATGTAGATTTTAGTCGTTGGTGTCAATTAGGCGGTCTATGGACTTTTGTAGCACTCC 328 Query 180328 ACGGTGCCTTCGCCCTAATTGGATTTATGCTACGCCAGTTTGAACTGGCACGTCTTATTG 180387 |||| || || || ||||| || || ||| ||| ||| |||||| || || | || Sbjct 327 ACGG-GCTTTTGCACTAATAGGGTTCATGTTACACCAACTTGAACGTGCTCGGTCTGTTC 269 Query 180388 GTATCCGTCCTTACAATGCTATTGCATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTAT 180447 | ||| ||||| || |||||||||||| || ||| | ||||| |||| Sbjct 268 AATTGNNNNNTTATAATGCAATCTCATTCTCTGGTCTAATTGCTATTTTTGTTTCTGTAT 209 Query 180448 TTCTCATCTACCCACTGGGTCAGTCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAG 180507 |||| | || ||||| || || | ||||||||||||| || |||||| ||||||| Sbjct 208 TTCTTAGTTATCCACTCGG-CAATATGGTTGGTTCTTTGCACCGAGTTTTGGTGTAGCAG 150 Query 180508 CAATCTTTAGATTCCTACTCTTTCTTC-AGGGTTTCCACAACTGGACCCTCAACCCCTTC 180566 |||| ||| ||||| | || ||||||| | || || || || ||||| | || | || Sbjct 149 CAATATTTCGATTCATCCT-TTTCTTCCAAGGATTTCATAATTGGACGTTGAATCTATTT 91 Query 180567 CATATGATGGGAGTTGCTGGTATACTAGGTGGAGCATTGCTATCAGCAATCCATGGCGTA 180626 |||||||||||| |||| || || |||| | || || |||| | || ||||| | | Sbjct 90 CATATGATGGGATTTGCCGGAGTATTAGGCGTGGCTTTTCTATGCACTATTCATGGAGCA 31 Query 180627 ACTGTGGAGAACACACTGTATGAAGATGG 180655 | | | ||||| || | ||| || || Sbjct 30 AACATACAAAACACTCTATTTGAGGACGG 2 >seq747441 Length=209 Score = 132 bits (146), Expect = 6e-26 Identities = 156/210 (74%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 180325 TCCACGGTGCCTTCGCCCTAATTGGATTTATGCTACGCCAGTTTGAACTGGCACGTCTTA 180384 ||||||| || || || ||||| || || ||| ||||||| |||||||| || || | Sbjct 1 TCCACGGGGCTTTTGCACTAATAGGTTTCATGTTACGCCAATTTGAACTTGCTCGGTCTG 60 Query 180385 TTGGTATCCGTCCTTACAATGCTATTGCATTCTCTGGTCCTATCGCTGTATTTGTCAGCG 180444 || | || ||||| ||||| || |||||||| |||| || ||| ||||| | Sbjct 61 TTCAATTGCGGCCTTATAATGCAATCTCATTCTCTCGTCCAATTTTTGTTTTTGTTTCGG 120 Query 180445 TATTTCTCATCTACCCACTGGGTCAGTCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAG 180504 |||| || || || |||||||| || || ||||||||||||| || |||||| |||| Sbjct 121 TATTCCTTATTTATCCACTGGGGCAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAG 180 Query 180505 CAGCAATCTTTAGATTCCTACTCTTTCTTC 180534 |||| || ||| ||||| | || ||||||| Sbjct 181 CAGCGATATTTCGATTCATCCT-TTTCTTC 209 >seq143040 Length=3997 Score = 114 bits (126), Expect = 2e-20 Identities = 145/197 (74%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 180444 GTATTTCTCATCTACCCACTGGGTCAGTCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTA 180503 ||||| || || || |||||||| || || ||||||||||||| | |||||| ||| Sbjct 3865 GTATTCCTTATTTATCCACTGGGGCAATCTGGTTGGTTCTTTGCACTGAGTTTTGGCGTA 3806 Query 180504 GCAGCAATCTTTAGATTCCTACTCTTTCTTC-AGGGTTTCCACAACTGGACCCTCAACCC 180562 | || || ||| ||||| | || ||||||| | || || || || ||||| | ||||| Sbjct 3805 ACGGCGATATTTTGATTCATCCT-TTTCTTCCAAGGATTTCATAATTGGACGTTGAACCC 3747 Query 180563 CTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCATTGCTATCAGCAATCCATGG 180622 || ||||||||||||||||| || ||| |||| | || ||||| || || ||||| Sbjct 3746 ATTTCATATGATGGGAGTTGCCGGAATATTAGGCGCGGCTCTGCTACGCGCTATTCATGG 3687 Query 180623 CGTAACTGTGGAGAACA 180639 | || || || |||| Sbjct 3686 AGCAAACGTAGAAAACA 3670 >seq263076 Length=554 Score = 105 bits (116), Expect = 8e-18 Identities = 205/303 (68%), Gaps = 4/303 (1%) Strand=Plus/Minus Query 180731 CTTCTGGTCGCAGATCTTCGGTATTGCATTTT-CTAACAAGCGGTGGCTTCATTTTTTCA 180789 ||| ||||| || ||||| ||| || |||| | || || | ||| | ||||| || | Sbjct 554 CTTTTGGTCCCAAATCTTTGGTGATGATTTTTTCCAATAAACCTTGGTTACATTTATTTA 495 Query 180790 TGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTG-CT 180848 || | ||||| ||| | || |||||| | | ||||||||| ||| ||||| || Sbjct 494 TGCTATTTGTAATTGTCACTAGTTTATGGATGACTTATATTGGCATAGTTG-TCTTGGCT 436 Query 180849 CTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAG 180908 || ||| | ||||| || | ||| | ||| | ||||||||||| Sbjct 435 CTGAACTTACGTGCCTATGNNNNNNNNNNNNNNNNNATCCGTGCAACGGAAGATCCTGAA 376 Query 180909 TTCGAGACGTTCTACACC-AAGAACATCCTATTGAATGAAGGACTACGTGCATGGTTGGC 180967 || ||||| |||||| || || || || |||||||| | | ||||| | | |||| Sbjct 375 TTTGAGACTTTCTACTCCAAAAAATATTTATTTGAATGAGAGTATTCGTGCGTAGATGGC 316 Query 180968 ACCTGCCGATCAACCACACGAAAACTTCATCTTCCCTGAAGAAGTTCTACCAAGAGGTAA 181027 |||| ||||| || || ||||| | || |||||||| || ||||||||| | || || Sbjct 315 ACCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAA 256 Query 181028 CGC 181030 || Sbjct 255 TGC 253 >seq2075000 Length=209 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/199 (71%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 180336 TTCGCCCTAATTGGATTTATGCTACGCCAGTTTGAACTGGCACGTCTTATTGGTATCCGT 180395 || || ||||| || || ||| ||||||| |||||||| || || | || | || Sbjct 207 TTTGCACTAATAGGTTTCATGTTACGCCAATTTGAACTTGCTCGGTCTGTTCAATTGCGG 148 Query 180396 CCTTACAATGCTATTGCATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTTCTCATC 180455 ||||| ||||| || ||||||||||||| || ||| || | |||| || | Sbjct 147 CCTTATAATGCAATCTCATTCTCTGGTCCAATTTTTGTTTTCATTTCTTTATTCCTTAGT 88 Query 180456 TACCCACTGGGTCAGTCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTT 180515 || ||||| || || || |||||||||||||| || |||| |||||||| || ||| Sbjct 87 TATCCACTAGGGCAATCTAGTTGGTTCTTTGCGCCGAGTTTTCATGTAGCAGCGATATTT 28 Query 180516 AGATTCCTACTCTTTCTTC 180534 ||||| | || ||||||| Sbjct 27 TGATTCATTCT-TTTCTTC 10 >seq124049 Length=9620 Score = 93.3 bits (102), Expect = 5e-14 Identities = 207/303 (68%), Gaps = 6/303 (2%) Strand=Plus/Plus Query 180396 CCTTACAATGCTATTGCATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTTCTCATC 180455 ||||| ||||| || ||||||||||||| || | | |||| ||||| || || Sbjct 9318 CCTTATAATGCAATCTCATTCTCTGGTCCAATTGTTACTTTTGCTTCTGTATTCCTTATT 9377 Query 180456 TACCCACTGGGTCAGTCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTT 180515 | |||||||| || || ||| ||||||||| | |||||| | | || || || Sbjct 9378 TGTCCACTGGGGCAATCTGGTTAGTTCTTTGCGCTGAGTTTTGGCGCAACAATGATACTT 9437 Query 180516 AGATTCCTACTCTTTCTT-CAGGGTTTCCACAACTGGACCCTCAACCCCTTCCATATGAT 180574 ||||| | || |||||| || || || || || ||| | |||| || |||||||| Sbjct 9438 TGATTCATCCT-TTTCTTCCAAGGATTTCATAA-TGGGAGTTGTACCCATTTCATATGAT 9495 Query 180575 GGGAGTTGCTGGTATACTAGG-TGGAGCATTGCTATCAGCAATCCATGGCGTAACTGTGG 180633 |||| |||| || || |||| ||| || |||| || || ||||| | ||| | | Sbjct 9496 GGGATTTGCCGGAGTATTAGGCATGAGTCTT-CTATGCGCTATTCATGGAGCAAC-CTAG 9553 Query 180634 AGAACACACTGTATGAAGATGGAGAACAAGCAAACACCTTTAAGGCATTTGATTCAACGC 180693 | ||||| || | | | |||| || ||||| |||||| | || ||| | |||| | Sbjct 9554 AAAACACTCTATTTTAGGATGATGATGGTGCAAATACCTTTCATGCTTTTAACCCAACTC 9613 Query 180694 AAG 180696 ||| Sbjct 9614 AAG 9616 >seq219505 Length=1904 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 180826 CTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAGA 180885 |||||||| | ||||| | || || ||| | |||| || || || || | || | Sbjct 1889 CTATTGGCGTAATTGGCTTGGCACTGAACTTATGTGCCTATGACTTTGTTTCCTAGGAAA 1830 Query 180886 TCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACCAAGAACATCCTATTGAATG 180945 || | ||||| ||||||||||| | ||||| || |||| || || || || || || | Sbjct 1829 TCTGTGCAGCGGAAGATCCTGAATATGAGACTTTTGACACAAAAAATATTCTTTTAAACG 1770 Query 180946 AAGGACTACGTGCATGGTTGGCACCTGCCGATCAACCACACGAAAACTTCATCTTCCCTG 181005 | || | |||| ||| ||| | | | |||||||| || ||||| | || ||||||| Sbjct 1769 AGGGTATTCGTGTGTGGATGGAAGCCGAGGATCAACCTCATGAAAATCTTATATTCCCTG 1710 Query 181006 AAGAAGTTCTACCAAGAGGTAAC 181028 | || | ||| ||| | || ||| Sbjct 1709 AGGAGGCTCTGCCACGTGGAAAC 1687 >seq1972347 Length=213 Score = 86.0 bits (94), Expect = 7e-12 Identities = 90/116 (78%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 180826 CTATTGGCATTATTGGTCTTG-CTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAG 180884 |||||||| ||| | |||||| |||| ||| | ||||| || || || || || || Sbjct 97 CTATTGGC-TTAGTTGTCTTGGCTCTGAACTTACGTGCCTATGACTTTGTTTCCCAGGAA 155 Query 180885 ATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACCAAGAACATCCTATT 180940 ||| | ||||| ||||||||||| |||||||| ||||||||||| || || || || Sbjct 156 ATCCGTGCAGCGGAAGATCCTGAATTCGAGACTTTCTACACCAAAAATATTCTTTT 211 >seq188012 Length=2438 Score = 84.2 bits (92), Expect = 3e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 179188 TATATGGGACGTGAGTGGGAACTTTCTTACCGTCTAGGTATGCGTCCATGGATCTGTGTT 179247 |||||||| |||||||||||||| || |||||| ||||||||||| ||||| |||| Sbjct 2351 TATATGGGTTGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTT 2410 Query 179248 GCATACTCTGCACCAGTCGCTGCTGC 179273 ||||| || || || || || ||||| Sbjct 2411 GCATATTCAGCTCCTGTTGCAGCTGC 2436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594477043922880