Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_027981.1 Length=42612 Score E Sequences producing significant alignments: (Bits) Value seq835057 93.3 1e-14 >seq835057 Length=261 Score = 93.3 bits (102), Expect = 1e-14 Identities = 122/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 15827 CGACATGATCGCGGACAGTCTGGTTCGCAACCACCTGTGGGCAGTTGACCGCAACATCAC 15886 |||||| || || ||||| || | | ||| |||||||| || |||||| ||||| Sbjct 17 CGACATCATTGCTGACAGCCTCGAGGCCGCCCATCTGTGGGCCGTCGACCGCGGCATCAG 76 Query 15887 CAAAACCTACGTCGAAGACGTGACGGAAGGGGTGAACAACTACCTGCGCCACCTCAAAAA 15946 ||| ||||||||||| |||||| || || || ||| || ||||||| ||| || | Sbjct 77 CAAGACCTACGTCGACGACGTGCGCGAGGGCGTCAACGCCTTCCTGCGCGGCCTGAAGAC 136 Query 15947 CATCGGTGCGATTGCCGGTGGTGAGTGCTGGGTGGACCCGGAGCTGAAC 15995 | || ||||| ||| || | |||||| | |||||||| |||||| Sbjct 137 CCAGGGCGCGATCCTCGGCGGCAACTGCTGGATCGACCCGGAACTGAAC 185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132875146827388