Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq23053 87.8 8e-13 >seq23053 Length=4356 Score = 87.8 bits (96), Expect = 8e-13 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 65090 GTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTCTGA 65149 || |||||||||||| ||| || | ||||||||| || || | ||||| |||| Sbjct 3818 GTACCAAACTGACCACGGGGCTCCAAAAGATTAATATTATTGCTGCCGACAAAATCCTGA 3759 Query 65150 GCCATTCCGATAATTGCTGCAT-TTAAACTCGCTTCACCGTGATGATATCCTGAATGTTC 65208 |||||||| | ||||| ||| | || |||| ||||| || || ||| |||| ||||| Sbjct 3758 GCCATTCCTACAATTG-TGCTTGCTAGACTCTGCTCACCATGGTGGTATGCTGAGTGTTC 3700 Query 65209 AGAGACATATCCACTAAATTGAGCAAC 65235 || ||||| ||| ||||||| || || Sbjct 3699 TGACACATAGCCAATAAATTGTGCCAC 3673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 229711541062650