Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_028667.1 Length=39593 Score E Sequences producing significant alignments: (Bits) Value seq3078 95.1 3e-15 >seq3078 Length=215 Score = 95.1 bits (104), Expect = 3e-15 Identities = 98/126 (78%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 28202 ATGCAGGAGGCGACTGGTAAGGCCGTTTCTGAAACCGTGGCCGAGTTCTCCAAGCTGGCC 28261 ||||||||||| || || ||||| || ||| || || ||||| || ||||||| ||| Sbjct 131 ATGCAGGAGGCTACCGGCAAGGCAGTCAGTGAGACGGTTGCCGAATTTGCCAAGCTCGCC 72 Query 28262 GATGATCCGGTCAAGGCGT-CGCAGCAGCTCAATGACCGCTATCACTACCTGACGGCCTC 28320 ||||| ||||| || |||| ||| || ||||||||| | || ||||| ||||| || || Sbjct 71 GATGACCCGGTAAAAGCGTCCGCCGC-GCTCAATGAGCAGTACCACTATCTGACAGCTTC 13 Query 28321 GGTGTA 28326 ||| || Sbjct 12 GGTTTA 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123452727785910