Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_028688.1 Length=40114 Score E Sequences producing significant alignments: (Bits) Value seq28963 127 5e-25 >seq28963 Length=574 Score = 127 bits (140), Expect = 5e-25 Identities = 129/168 (77%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 20623 GACGCCAGCGGACTCGAACTCCGTTGTCTGGCACACTTCATGTCTAAGTACGACGACGGG 20682 |||||| ||| | || || || || ||||| ||||||||| | ||| |||||| ||| Sbjct 168 GACGCCTCGGGATTGGAGCTGCGCTGCCTGGCGCACTTCATGGCAAAGCACGACGGCGGC 109 Query 20683 GCATATGCGGATGTCATTCTCAACGGTGATATCCACACAGTCAACCAAACGGCGGCTGAG 20742 | || || | ||||| ||| | || || |||||| | ||||||||| ||||||| | Sbjct 108 GAGTACGCCAAGGTCATCCTCGAAGGCGACATCCACTCCGTCAACCAATCGGCGGCAGGA 49 Query 20743 TTGCCAACACGTGATAACGCCAAGACATTCATCTACGGTTTCCTCTAT 20790 ||||||| || || ||||||||||| |||||||||| ||||||||| Sbjct 48 CTGCCAACCCGCGACAACGCCAAGACCTTCATCTACGCCTTCCTCTAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125078789501912