Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_028746.1 Length=44249 Score E Sequences producing significant alignments: (Bits) Value seq55220 87.8 5e-13 >seq55220 Length=256 Score = 87.8 bits (96), Expect = 5e-13 Identities = 133/188 (71%), Gaps = 1/188 (1%) Strand=Plus/Minus Query 32257 GGATACCTGGGAAGGAAAGGAGATTACCGAAATCTTCCGACGCAAAAATCAATGGAACTT 32316 || ||||| || | ||||| || || || | || ||||| ||| |||||||| Sbjct 252 GGGTACCTCGGCCGCAAAGGGGAGTATTACAACATGCCAACGCAGCGATCCATGGAACTC 193 Query 32317 GGATTGTTTGAAATCAAAACTAGGACTATTGCTAATCCAGACGGAAGTACGAGGATAACC 32376 ||| ||||||| ||||| || | || || ||||||||||||||| | | ||||| Sbjct 192 GGACTGTTTGAGATCAAGACACGTACCATCAACAATCCAGACGGAAGTGTGCGAGTAACC 133 Query 32377 AAAACTACAAAAGTTACGGGTAAGGGGCAAGTTTACTTTGTAAATAAATTCAAACAAGGA 32436 || || || || || || ||||| || || ||||| || || || |||||| || || Sbjct 132 AAGACGACGAAGGTCACTCCCAAGGGACAGGTGTACTTCGTGAACAAGTTCAAA-AACGA 74 Query 32437 GAAACAGC 32444 ||||| || Sbjct 73 GAAACGGC 66 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137984288917782