Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_028810.1 Length=52357 Score E Sequences producing significant alignments: (Bits) Value seq833769 123 8e-24 >seq833769 Length=269 Score = 123 bits (136), Expect = 8e-24 Identities = 131/173 (76%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 40288 CGTTGAGCGACTTCGGGAACCCGCTGCCGTAGAGCCACGCGATCGAGTCGCGGACCTCGA 40347 ||||| | ||||||||||| || |||||||| ||| |||||| |||||||| ||||| Sbjct 51 CGTTGTGTGACTTCGGGAAGCCCGAGCCGTAGACCCAGGCGATCATGTCGCGGATCTCGA 110 Query 40348 ACCCGGCGTCCTCGATGGCCACGGTCAGCCGGTGCCAGGTGCGGGACCCGCCGAAGGCGA 40407 | || || ||||||||| |||| || || ||| |||||| | || ||||||| | Sbjct 111 AACCCGCATCCTCGATGCGAACGGCCATGCGATGCTGGGTGCGCGTGCCTGCGAAGGCCA 170 Query 40408 GCAGGTGCCCACCGGGCTTGAGGACCCGCAGGCATTGCTCCCACATCTCGACG 40460 | || || || || ||||| || || |||||||| ||| |||| || ||| || Sbjct 171 GTAGATGGCCGCCAGGCTTCAGTACGCGCAGGCACTGCGCCCAGATATCGGCG 223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163289679308078