Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_028813.1 Length=57766 Score E Sequences producing significant alignments: (Bits) Value seq833769 84.2 8e-12 >seq833769 Length=269 Score = 84.2 bits (92), Expect = 8e-12 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 45500 AGTGCTTGCGTGTGTTGAAACCGGGCGGGCACATGTTGGCGTTCGGCGGTTCGCGCACCT 45559 ||||| |||| || |||| || ||||| || | |||| |||| || |||||||| Sbjct 206 AGTGCCTGCGCGTACTGAAGCCTGGCGGCCATCTACTGGCCTTCGCAGGCACGCGCACCC 147 Query 45560 GGCACCGGCTGGCGGCGGCGATCGAGGACGCCGGGTTTGAGATCCGGGACTCCATCGCGT 45619 ||| || |||| | |||||||| || || || |||||||| ||| ||||| | Sbjct 146 AGCATCGCATGGCCGTTCGCATCGAGGATGCGGGTTTCGAGATCCGCGACATGATCGCCT 87 Query 45620 GGCTGTACGGATCCGGGTTCCCGAAGTCGCTCGACG 45655 || | ||||| || || ||||||||||| | | ||| Sbjct 86 GGGTCTACGGCTCGGGCTTCCCGAAGTCACACAACG 51 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180171383380736