Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_028889.1 Length=59416 Score E Sequences producing significant alignments: (Bits) Value seq833769 109 2e-19 >seq833769 Length=269 Score = 109 bits (120), Expect = 2e-19 Identities = 126/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 47947 CGAGATGTGGGAGCAATGCCTGCGGGCCCTCAAACCTGGCGGGCACCTGCTCGCGTTCGG 48006 ||| || |||| ||| |||||||| | || || |||||||| || || || || |||| Sbjct 220 CGATATCTGGGCGCAGTGCCTGCGCGTACTGAAGCCTGGCGGCCATCTACTGGCCTTCGC 161 Query 48007 TGGCTCGCGTACCTGGCATCGGCTGGCTGTGGCAATCGAGGACGCGGGCTTCGAGATTCG 48066 ||| |||| ||| |||||| |||| || |||||||| ||||| |||||||| || Sbjct 160 AGGCACGCGCACCCAGCATCGCATGGCCGTTCGCATCGAGGATGCGGGTTTCGAGATCCG 101 Query 48067 TGACTCTATCGCGTGGCTGTACGGCAGTGGTTTCCCGAAGTCGCTCGACG 48116 ||| ||||| ||| | |||||| || ||||||||||| | | ||| Sbjct 100 CGACATGATCGCCTGGGTCTACGGCTCGGGCTTCCCGAAGTCACACAACG 51 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185321098988036