Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_028961.1 Length=55094 Score E Sequences producing significant alignments: (Bits) Value seq833769 82.4 3e-11 >seq833769 Length=269 Score = 82.4 bits (90), Expect = 3e-11 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 42321 AGTGCTTGCGTGTGTTGAAACCGGGCGGTCACATGTTGGCGTTCGGCGGCTCGCGCACCT 42380 ||||| |||| || |||| || ||||| || | |||| |||| ||| |||||||| Sbjct 206 AGTGCCTGCGCGTACTGAAGCCTGGCGGCCATCTACTGGCCTTCGCAGGCACGCGCACCC 147 Query 42381 GGCACCGGCTGGCGGTGGCGATCGAGGATGCCGGGTTCGAGGTCCGTGACTCCATCGCGT 42440 ||| || |||| || ||||||||||| || |||||| |||| ||| ||||| | Sbjct 146 AGCATCGCATGGCCGTTCGCATCGAGGATGCGGGTTTCGAGATCCGCGACATGATCGCCT 87 Query 42441 GGCTGTACGGCCAGGGAATGCCGAA 42465 || | |||||| ||| | ||||| Sbjct 86 GGGTCTACGGCTCGGGCTTCCCGAA 62 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 171831965136672