Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_028977.1 Length=41054 Score E Sequences producing significant alignments: (Bits) Value seq28963 107 5e-19 >seq28963 Length=574 Score = 107 bits (118), Expect = 5e-19 Identities = 124/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 15344 GACGCCAGTGGTCTGGAGCTGCGGTGTCTCGCCCACTTCATGTCCAAGTACGACGGGGGA 15403 |||||| || |||||||||| || || || ||||||||| | ||| ||||||| || Sbjct 168 GACGCCTCGGGATTGGAGCTGCGCTGCCTGGCGCACTTCATGGCAAAGCACGACGGCGGC 109 Query 15404 GCTTATGCAGATGTTATTCTTAACGGGGACATCCACACAGTAAACCAACAGGCTGCTGAG 15463 | || || | || || || | || ||||||||| | || |||||| ||| || | Sbjct 108 GAGTACGCCAAGGTCATCCTCGAAGGCGACATCCACTCCGTCAACCAATCGGCGGCAGGA 49 Query 15464 TTGCCTACACGCGATAACGCCAAGACCTTTATCTACGGGTTCCTTTA 15510 |||| || ||||| |||||||||||||| ||||||| ||||| || Sbjct 48 CTGCCAACCCGCGACAACGCCAAGACCTTCATCTACGCCTTCCTCTA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128012566878192